RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	LYZL4	Q96KX0	146 aa		13.4	□□□□□ -0.26
CACNA1A-238	ENST00000637276	NBAS	A2RRP1	2371 aa		13.4	□□□□□ -0.26
CACNA1A-238	ENST00000637276	NR2C2AP	Q86WQ0	139 aa		13.4	□□□□□ -0.26
CACNA1A-238	ENST00000637276	C1orf43	Q9BWL3	253 aa		13.4	□□□□□ -0.26
CACNA1A-238	ENST00000637276	HEATR5A	Q86XA9	2040 aa		13.4	□□□□□ -0.26
CACNA1A-238	ENST00000637276	ZNF362	Q5T0B9	420 aa	Predicted RBP	13.4	□□□□□ -0.26
CACNA1A-238	ENST00000637276	CHAC1	Q9BUX1	264 aa		13.4	□□□□□ -0.26
CACNA1A-238	ENST00000637276	OVOL1	O14753	267 aa		13.4	□□□□□ -0.26
CACNA1A-238	ENST00000637276	FGFBP3	Q8TAT2	258 aa		13.4	□□□□□ -0.26
CACNA1A-238	ENST00000637276	USF3	Q68DE3	2245 aa		13.4	□□□□□ -0.26
CACNA1A-238	ENST00000637276	C18orf12	Q96KH6	178 aa		13.39	□□□□□ -0.27
CACNA1A-238	ENST00000637276	WFDC1	Q9HC57	220 aa		13.39	□□□□□ -0.27
CACNA1A-238	ENST00000637276	TMEM242	Q9NWH2	141 aa		13.39	□□□□□ -0.27
CACNA1A-238	ENST00000637276	DEFB136	Q30KP8	78 aa		13.39	□□□□□ -0.27
CACNA1A-238	ENST00000637276	LINC01356	Q8N9X3	169 aa		13.39	□□□□□ -0.27
CACNA1A-238	ENST00000637276	RHPN1-AS1	Q9BWJ2	59 aa		13.39	□□□□□ -0.27
CACNA1A-238	ENST00000637276	HOXB1	P14653	301 aa	Predicted RBP	13.39	□□□□□ -0.27
CACNA1A-238	ENST00000637276	CCL20	P78556	96 aa		13.39	□□□□□ -0.27
CACNA1A-238	ENST00000637276	STPG4	Q8N801	248 aa		13.39	□□□□□ -0.27
CACNA1A-238	ENST00000637276	VCY	O14598	125 aa		13.39	□□□□□ -0.27
CACNA1A-238	ENST00000637276	RNASE2	P10153	161 aa	Known RBP	13.38	□□□□□ -0.27
CACNA1A-238	ENST00000637276	DNAJC30	Q96LL9	226 aa		13.38	□□□□□ -0.27
CACNA1A-238	ENST00000637276		A0A1W2PRE2	83 aa		13.38	□□□□□ -0.27
CACNA1A-238	ENST00000637276	TIMP3	P35625	211 aa		13.38	□□□□□ -0.27
CACNA1A-238	ENST00000637276	PKDREJ	Q9NTG1	2253 aa		13.38	□□□□□ -0.27
CACNA1A-238	ENST00000637276	PCNX1	Q96RV3	2341 aa		13.38	□□□□□ -0.27
CACNA1A-238	ENST00000637276	C15orf61	A6NNL5	157 aa		13.38	□□□□□ -0.27
CACNA1A-238	ENST00000637276	ARTN	Q5T4W7	220 aa		13.38	□□□□□ -0.27
CACNA1A-238	ENST00000637276	AMN1	Q8IY45	258 aa		13.38	□□□□□ -0.27
CACNA1A-238	ENST00000637276	TRBV25-1	A0A075B6N4	114 aa		13.38	□□□□□ -0.27
CACNA1A-238	ENST00000637276	RBM3	P98179	157 aa	Known RBP	13.38	□□□□□ -0.27
CACNA1A-238	ENST00000637276	RNF166	Q96A37	237 aa	Predicted RBP	13.38	□□□□□ -0.27
CACNA1A-238	ENST00000637276	SCN4A	P35499	1836 aa		13.38	□□□□□ -0.27
CACNA1A-238	ENST00000637276		A0A0G2JNJ9	132 aa		13.38	□□□□□ -0.27
CACNA1A-238	ENST00000637276		Q9UFV3	132 aa		13.38	□□□□□ -0.27
CACNA1A-238	ENST00000637276	IGHV1-3	A0A0C4DH29	117 aa		13.37	□□□□□ -0.27
CACNA1A-238	ENST00000637276	SOCS3	O14543	225 aa		13.37	□□□□□ -0.27
CACNA1A-238	ENST00000637276	PLXNA1	Q9UIW2	1896 aa		13.37	□□□□□ -0.27
CACNA1A-238	ENST00000637276	EFNB3	Q15768	340 aa		13.37	□□□□□ -0.27
CACNA1A-238	ENST00000637276	SAA4	P35542	130 aa		13.37	□□□□□ -0.27
CACNA1A-238	ENST00000637276	MPLKIP	Q8TAP9	179 aa		13.37	□□□□□ -0.27
CACNA1A-238	ENST00000637276	RETN	Q9HD89	108 aa		13.37	□□□□□ -0.27
CACNA1A-238	ENST00000637276	NOP10	Q9NPE3	64 aa	Known RBP	13.37	□□□□□ -0.27
CACNA1A-238	ENST00000637276	WISP3	O95389	354 aa	Predicted RBP	13.36	□□□□□ -0.27
CACNA1A-238	ENST00000637276	COX5B	P10606	129 aa		13.36	□□□□□ -0.27
CACNA1A-238	ENST00000637276	SMIM10L1	P0DMW3	83 aa		13.36	□□□□□ -0.27
CACNA1A-238	ENST00000637276	SMIM10	Q96HG1	83 aa		13.36	□□□□□ -0.27
CACNA1A-238	ENST00000637276		F8W735	103 aa	Predicted RBP	13.36	□□□□□ -0.27
CACNA1A-238	ENST00000637276	MYMX	A0A1B0GTQ4	84 aa		13.36	□□□□□ -0.27
CACNA1A-238	ENST00000637276	BUB3	O43684	328 aa		13.36	□□□□□ -0.27
CACNA1A-238	ENST00000637276	TEX22	C9J3V5	150 aa		13.35	□□□□□ -0.27
CACNA1A-238	ENST00000637276	DTX1	Q86Y01	620 aa		13.35	□□□□□ -0.27
CACNA1A-238	ENST00000637276		A0A0J9YWU9	116 aa		13.35	□□□□□ -0.27
CACNA1A-238	ENST00000637276	PVRIG	Q6DKI7	326 aa		13.35	□□□□□ -0.27
CACNA1A-238	ENST00000637276	MGST2	Q99735	147 aa		13.35	□□□□□ -0.27
CACNA1A-238	ENST00000637276		A0A096LNI7	61 aa		13.35	□□□□□ -0.27
CACNA1A-238	ENST00000637276		A0A0A6YYD4	124 aa		13.35	□□□□□ -0.27
CACNA1A-238	ENST00000637276	PSME4	Q14997	1843 aa		13.35	□□□□□ -0.27
CACNA1A-238	ENST00000637276	LOC105371267	A0A1B0GV96	52 aa		13.35	□□□□□ -0.27
CACNA1A-238	ENST00000637276		A0A1W2PR77	199 aa		13.35	□□□□□ -0.27
CACNA1A-238	ENST00000637276	WIPF2	Q8TF74	440 aa	Predicted RBP	13.35	□□□□□ -0.27
CACNA1A-238	ENST00000637276	TP53TG1	Q9Y2A0	90 aa		13.35	□□□□□ -0.27
CACNA1A-238	ENST00000637276		B4DSR2	109 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	LINC01619	G3V211	115 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	PQLC2L	A1A4F0	135 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	IQCF6	A8MYZ5	107 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	NCR3	O14931	201 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	ADAMTSL5	Q6ZMM2	481 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	TIRAP	P58753	221 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	MRPL14	Q6P1L8	145 aa	Known RBP	13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	CTHRC1	Q96CG8	243 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	TM2D1	Q9BX74	207 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	SHANK1	Q9Y566	2161 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	HGFAC	Q04756	655 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	ZNF497	Q6ZNH5	498 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	ZNF503	Q96F45	646 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	RNF126	Q9BV68	326 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	SEM1	Q6ZVN7	128 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	GTSF1	Q8WW33	167 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	C1QTNF5	Q9BXJ0	243 aa		13.34	□□□□□ -0.27
CACNA1A-238	ENST00000637276	SUPT4H1	P63272	117 aa	Known RBP	13.33	□□□□□ -0.27
CACNA1A-238	ENST00000637276	CXCL1	P09341	107 aa		13.33	□□□□□ -0.28
CACNA1A-238	ENST00000637276	NPB	Q8NG41	125 aa		13.33	□□□□□ -0.28
CACNA1A-238	ENST00000637276	PAQR4	Q8N4S7	273 aa	Predicted RBP	13.33	□□□□□ -0.28
CACNA1A-238	ENST00000637276	PLSCR4	Q9NRQ2	329 aa		13.33	□□□□□ -0.28
CACNA1A-238	ENST00000637276	ADAMTSL3	P82987	1691 aa		13.33	□□□□□ -0.28
CACNA1A-238	ENST00000637276	LINC00479	Q96M42	142 aa		13.33	□□□□□ -0.28
CACNA1A-238	ENST00000637276		G3V318	75 aa		13.32	□□□□□ -0.28
CACNA1A-238	ENST00000637276	RNF222	A6NCQ9	220 aa		13.32	□□□□□ -0.28
CACNA1A-238	ENST00000637276	UBE2A	P49459	152 aa		13.32	□□□□□ -0.28
CACNA1A-238	ENST00000637276	PLEKHB2	Q96CS7	222 aa		13.32	□□□□□ -0.28
CACNA1A-238	ENST00000637276	ACYP1	P07311	99 aa		13.32	□□□□□ -0.28
CACNA1A-238	ENST00000637276	APRG1	Q8IVJ8	170 aa		13.32	□□□□□ -0.28
CACNA1A-238	ENST00000637276	GREB1	Q4ZG55	1949 aa		13.32	□□□□□ -0.28
CACNA1A-238	ENST00000637276	SEC61G	P60059	68 aa		13.32	□□□□□ -0.28
CACNA1A-238	ENST00000637276		F2Z2F3	143 aa		13.32	□□□□□ -0.28
CACNA1A-238	ENST00000637276	TMEM213	A2RRL7	107 aa		13.31	□□□□□ -0.28
CACNA1A-238	ENST00000637276	DUT	P33316	252 aa	Known RBP	13.31	□□□□□ -0.28
CACNA1A-238	ENST00000637276	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.31	□□□□□ -0.28
CACNA1A-238	ENST00000637276	GBF1	Q92538	1859 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms