RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 ATRXP46100 2492 aa11.47□□□□□ -0.57
CLN6-215ENST00000636674 PDE6HQ13956 83 aa11.47□□□□□ -0.57
CLN6-215ENST00000636674 RNF125Q96EQ8 232 aa11.47□□□□□ -0.57
CLN6-215ENST00000636674 BBC3Q96PG8 261 aaPredicted RBP11.47□□□□□ -0.57
CLN6-215ENST00000636674 PPIAL4CA0A0B4J2A2 164 aa11.47□□□□□ -0.57
CLN6-215ENST00000636674 WI2-2373I1.2A0A1W2PRP0 233 aa11.47□□□□□ -0.57
CLN6-215ENST00000636674 K7EP13 123 aa11.47□□□□□ -0.57
CLN6-215ENST00000636674 PPIAL4GP0DN37 164 aa11.47□□□□□ -0.57
CLN6-215ENST00000636674 S100A7AQ86SG5 101 aa11.47□□□□□ -0.57
CLN6-215ENST00000636674 ZNF414Q96IQ9 312 aa11.47□□□□□ -0.57
CLN6-215ENST00000636674 ZNF48Q96MX3 618 aaPredicted RBP11.47□□□□□ -0.57
CLN6-215ENST00000636674 RAB1BQ9H0U4 201 aa11.47□□□□□ -0.57
CLN6-215ENST00000636674 AP5S1Q9NUS5 200 aa11.47□□□□□ -0.57
CLN6-215ENST00000636674 COL6A6A6NMZ7 2263 aa11.46□□□□□ -0.57
CLN6-215ENST00000636674 SERTM2A0A1B0GWG4 89 aa11.46□□□□□ -0.57
CLN6-215ENST00000636674 COX7A1P24310 79 aa11.46□□□□□ -0.57
CLN6-215ENST00000636674 PLGLAQ15195 96 aa11.46□□□□□ -0.57
CLN6-215ENST00000636674 C12orf54Q6X4T0 127 aa11.46□□□□□ -0.57
CLN6-215ENST00000636674 Q6ZVH6 145 aa11.46□□□□□ -0.57
CLN6-215ENST00000636674 ABHD17AQ96GS6 310 aa11.46□□□□□ -0.57
CLN6-215ENST00000636674 NDUFA3O95167 84 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 CRIP1P50238 77 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 FBLN7Q53RD9 439 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 MPV17L2Q567V2 206 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 BVES-AS1Q5T3Y7 98 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 COX8CQ7Z4L0 72 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 LY6G5BQ8NDX9 201 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 C17orf77Q96MU5 243 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 ZNF747Q9BV97 191 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 SH3BGRL2Q9UJC5 107 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 PIEZO2Q9H5I5 2752 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 TRAV30A0A087WSZ9 112 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 TOX4O94842 621 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 CD3EP07766 207 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 ZNF138P52744 262 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 NPBQ8NG41 125 aa11.45□□□□□ -0.58
CLN6-215ENST00000636674 TIMM23O14925 209 aa11.44□□□□□ -0.58
CLN6-215ENST00000636674 NBR2O15453 112 aa11.44□□□□□ -0.58
CLN6-215ENST00000636674 CNIH1O95406 144 aa11.44□□□□□ -0.58
CLN6-215ENST00000636674 IL4P05112 153 aa11.44□□□□□ -0.58
CLN6-215ENST00000636674 CSN1S1P47710 185 aa11.44□□□□□ -0.58
CLN6-215ENST00000636674 RHOGP84095 191 aa11.44□□□□□ -0.58
CLN6-215ENST00000636674 HIST1H1AQ02539 215 aaPredicted RBP11.44□□□□□ -0.58
CLN6-215ENST00000636674 PRB3Q04118 309 aaPredicted RBP11.44□□□□□ -0.58
CLN6-215ENST00000636674 DEFB125Q8N687 156 aa11.44□□□□□ -0.58
CLN6-215ENST00000636674 OR10AG1Q8NH19 301 aa11.44□□□□□ -0.58
CLN6-215ENST00000636674 DPF1Q92782 380 aa11.44□□□□□ -0.58
CLN6-215ENST00000636674 PMCHL2Q9BQD1 86 aa11.44□□□□□ -0.58
CLN6-215ENST00000636674 TP73-AS1Q9UF72 201 aa11.44□□□□□ -0.58
CLN6-215ENST00000636674 U3KQK5 164 aa11.44□□□□□ -0.58
CLN6-215ENST00000636674 LOC105371242A0A075B767 164 aa11.43□□□□□ -0.58
CLN6-215ENST00000636674 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.43□□□□□ -0.58
CLN6-215ENST00000636674 TAX1BP3O14907 124 aa11.43□□□□□ -0.58
CLN6-215ENST00000636674 RPS20P60866 119 aaKnown RBP11.43□□□□□ -0.58
CLN6-215ENST00000636674 LDLRAD2Q5SZI1 272 aa11.43□□□□□ -0.58
CLN6-215ENST00000636674 OR11H6Q8NGC7 330 aa11.43□□□□□ -0.58
CLN6-215ENST00000636674 CFHR4Q92496 578 aa11.43□□□□□ -0.58
CLN6-215ENST00000636674 TLN1Q9Y490 2541 aaKnown RBP11.43□□□□□ -0.58
CLN6-215ENST00000636674 NUDT3O95989 172 aa11.43□□□□□ -0.58
CLN6-215ENST00000636674 CT45A10P0DMU9 189 aa11.43□□□□□ -0.58
CLN6-215ENST00000636674 ANKRD39Q53RE8 183 aa11.43□□□□□ -0.58
CLN6-215ENST00000636674 FA2HQ7L5A8 372 aa11.43□□□□□ -0.58
CLN6-215ENST00000636674 SMG1Q96Q15 3661 aaKnown RBP11.43□□□□□ -0.58
CLN6-215ENST00000636674 NPIPB5A8MRT5 1133 aa11.42□□□□□ -0.58
CLN6-215ENST00000636674 CSN3P07498 182 aa11.42□□□□□ -0.58
CLN6-215ENST00000636674 COX8AP10176 69 aa11.42□□□□□ -0.58
CLN6-215ENST00000636674 AAMDCQ9H7C9 122 aa11.42□□□□□ -0.58
CLN6-215ENST00000636674 ABCA1O95477 2261 aa11.42□□□□□ -0.58
CLN6-215ENST00000636674 IGLV11-55A0A075B6I3 123 aa11.42□□□□□ -0.58
CLN6-215ENST00000636674 FBLL1A6NHQ2 334 aaKnown RBP11.42□□□□□ -0.58
CLN6-215ENST00000636674 LYNX1G3V0Z9 82 aa11.42□□□□□ -0.58
CLN6-215ENST00000636674 LYNX1P0DP58 116 aa11.42□□□□□ -0.58
CLN6-215ENST00000636674 LY6DQ14210 128 aa11.42□□□□□ -0.58
CLN6-215ENST00000636674 DPM3Q9P2X0 92 aa11.42□□□□□ -0.58
CLN6-215ENST00000636674 M0R3E3 92 aa11.41□□□□□ -0.58
CLN6-215ENST00000636674 FCGR2BP31994 310 aaPredicted RBP11.41□□□□□ -0.58
CLN6-215ENST00000636674 PRSS3P2Q8NHM4 247 aa11.41□□□□□ -0.58
CLN6-215ENST00000636674 RNASE8Q8TDE3 154 aaKnown RBP11.41□□□□□ -0.58
CLN6-215ENST00000636674 IGFBPL1Q8WX77 278 aa11.41□□□□□ -0.58
CLN6-215ENST00000636674 PCNX1Q96RV3 2341 aa11.41□□□□□ -0.58
CLN6-215ENST00000636674 SPTA1P02549 2419 aa11.41□□□□□ -0.58
CLN6-215ENST00000636674 A0A096LNJ9 63 aa11.4□□□□□ -0.58
CLN6-215ENST00000636674 RBX1P62877 108 aa11.4□□□□□ -0.58
CLN6-215ENST00000636674 PSG9Q00887 426 aa11.4□□□□□ -0.58
CLN6-215ENST00000636674 FAM104BQ5XKR9 115 aa11.4□□□□□ -0.58
CLN6-215ENST00000636674 C8orf49Q96NF6 230 aa11.4□□□□□ -0.58
CLN6-215ENST00000636674 FANCD2OSQ96PS1 177 aa11.4□□□□□ -0.58
CLN6-215ENST00000636674 VKORC1Q9BQB6 163 aa11.4□□□□□ -0.58
CLN6-215ENST00000636674 ONECUT1Q9UBC0 465 aa11.4□□□□□ -0.58
CLN6-215ENST00000636674 BSNQ9UPA5 3926 aa11.4□□□□□ -0.58
CLN6-215ENST00000636674 MUC21A0A0G2JKD1 596 aa11.4□□□□□ -0.59
CLN6-215ENST00000636674 MUC21A0A140T8X8 626 aa11.4□□□□□ -0.59
CLN6-215ENST00000636674 ODF3BA8MYP8 253 aa11.4□□□□□ -0.59
CLN6-215ENST00000636674 F8W735 103 aaPredicted RBP11.4□□□□□ -0.59
CLN6-215ENST00000636674 CD5LO43866 347 aa11.4□□□□□ -0.59
CLN6-215ENST00000636674 GNG7O60262 68 aa11.4□□□□□ -0.59
CLN6-215ENST00000636674 CEACAM3P40198 252 aa11.4□□□□□ -0.59
CLN6-215ENST00000636674 MFAP4P55083 255 aa11.4□□□□□ -0.59
CLN6-215ENST00000636674 ARF6P62330 175 aa11.4□□□□□ -0.59
CLN6-215ENST00000636674 C5orf64Q2M2E5 130 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms