RNA–Protein interactions for RNA: ENST00000636571.1

CTSD-207, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-207ENST00000636571 C17orf77Q96MU5 243 aa11.64□□□□□ -0.55
CTSD-207ENST00000636571 CITED4Q96RK1 184 aa11.64□□□□□ -0.55
CTSD-207ENST00000636571 PFDN2Q9UHV9 154 aa11.64□□□□□ -0.55
CTSD-207ENST00000636571 SMAD5-AS1Q9Y6J3 95 aa11.64□□□□□ -0.55
CTSD-207ENST00000636571 H3BQ15 152 aa11.64□□□□□ -0.55
CTSD-207ENST00000636571 TFPI2P48307 235 aa11.64□□□□□ -0.55
CTSD-207ENST00000636571 RPL11P62913 178 aaKnown RBP11.64□□□□□ -0.55
CTSD-207ENST00000636571 GUCA2BQ16661 112 aa11.64□□□□□ -0.55
CTSD-207ENST00000636571 KPRPQ5T749 579 aaPredicted RBP11.64□□□□□ -0.55
CTSD-207ENST00000636571 COMMD7Q86VX2 200 aa11.64□□□□□ -0.55
CTSD-207ENST00000636571 RARRES2Q99969 163 aa11.64□□□□□ -0.55
CTSD-207ENST00000636571 GPR61Q9BZJ8 451 aa11.64□□□□□ -0.55
CTSD-207ENST00000636571 A0A1W2PS18 150 aa11.63□□□□□ -0.55
CTSD-207ENST00000636571 MRPS12O15235 138 aaKnown RBP11.63□□□□□ -0.55
CTSD-207ENST00000636571 S100A7P31151 101 aa11.63□□□□□ -0.55
CTSD-207ENST00000636571 RBPMS2Q6ZRY4 209 aaKnown RBP11.63□□□□□ -0.55
CTSD-207ENST00000636571 TMEM231Q9H6L2 316 aa11.63□□□□□ -0.55
CTSD-207ENST00000636571 ZNF586Q9NXT0 402 aa11.63□□□□□ -0.55
CTSD-207ENST00000636571 PAGE4O60829 102 aa11.62□□□□□ -0.55
CTSD-207ENST00000636571 PRB4P10163 310 aaPredicted RBP11.62□□□□□ -0.55
CTSD-207ENST00000636571 RPL7P18124 248 aaKnown RBP11.62□□□□□ -0.55
CTSD-207ENST00000636571 SRSF3P84103 164 aaKnown RBP11.62□□□□□ -0.55
CTSD-207ENST00000636571 TOR2AQ5JU69 321 aa11.62□□□□□ -0.55
CTSD-207ENST00000636571 LCN12Q6JVE5 192 aa11.62□□□□□ -0.55
CTSD-207ENST00000636571 WFDC3Q8IUB2 231 aa11.62□□□□□ -0.55
CTSD-207ENST00000636571 STXBP6Q8NFX7 210 aa11.62□□□□□ -0.55
CTSD-207ENST00000636571 GRAMD2BQ96HH9 432 aa11.62□□□□□ -0.55
CTSD-207ENST00000636571 TMEM14CQ9P0S9 112 aa11.62□□□□□ -0.55
CTSD-207ENST00000636571 ZNF256Q9Y2P7 627 aaPredicted RBP11.62□□□□□ -0.55
CTSD-207ENST00000636571 NBEAP1P0C6P0 100 aa11.62□□□□□ -0.55
CTSD-207ENST00000636571 ATF4P18848 351 aaPredicted RBP11.62□□□□□ -0.55
CTSD-207ENST00000636571 SIGLEC15Q6ZMC9 328 aa11.62□□□□□ -0.55
CTSD-207ENST00000636571 EIF5A2Q9GZV4 153 aaKnown RBP11.62□□□□□ -0.55
CTSD-207ENST00000636571 TMEM167BQ9NRX6 74 aa11.62□□□□□ -0.55
CTSD-207ENST00000636571 YTHDF2Q9Y5A9 579 aaKnown RBP11.62□□□□□ -0.55
CTSD-207ENST00000636571 TSPAN4O14817 238 aa11.61□□□□□ -0.55
CTSD-207ENST00000636571 CD7P09564 240 aa11.61□□□□□ -0.55
CTSD-207ENST00000636571 IGLC2P0DOY2 106 aa11.61□□□□□ -0.55
CTSD-207ENST00000636571 HIST1H1EP10412 219 aaKnown RBP11.61□□□□□ -0.55
CTSD-207ENST00000636571 PSMB3P49720 205 aa11.61□□□□□ -0.55
CTSD-207ENST00000636571 RANP62826 216 aaKnown RBP11.61□□□□□ -0.55
CTSD-207ENST00000636571 C1orf194Q5T5A4 169 aa11.61□□□□□ -0.55
CTSD-207ENST00000636571 CST9LP1Q5W188 147 aa11.61□□□□□ -0.55
CTSD-207ENST00000636571 FAM24BQ8N5W8 94 aa11.61□□□□□ -0.55
CTSD-207ENST00000636571 MS4A6AQ9H2W1 248 aa11.61□□□□□ -0.55
CTSD-207ENST00000636571 AURKAIP1Q9NWT8 199 aaPredicted RBP11.61□□□□□ -0.55
CTSD-207ENST00000636571 MEGF8Q7Z7M0 2845 aa11.61□□□□□ -0.55
CTSD-207ENST00000636571 RBFOX3A6NFN3 312 aa11.6□□□□□ -0.55
CTSD-207ENST00000636571 SLC17A3O00476 420 aa11.6□□□□□ -0.55
CTSD-207ENST00000636571 BMI1P35226 326 aa11.6□□□□□ -0.55
CTSD-207ENST00000636571 GALR1P47211 349 aa11.6□□□□□ -0.55
CTSD-207ENST00000636571 GUK1Q16774 197 aa11.6□□□□□ -0.55
CTSD-207ENST00000636571 IGFL4Q6B9Z1 124 aa11.6□□□□□ -0.55
CTSD-207ENST00000636571 OR2K2Q8NGT1 345 aa11.6□□□□□ -0.55
CTSD-207ENST00000636571 RXFP4Q8TDU9 374 aa11.6□□□□□ -0.55
CTSD-207ENST00000636571 WFDC10AQ9H1F0 79 aa11.6□□□□□ -0.55
CTSD-207ENST00000636571 ATP5G3P48201 142 aa11.59□□□□□ -0.55
CTSD-207ENST00000636571 RNF24Q9Y225 148 aa11.59□□□□□ -0.55
CTSD-207ENST00000636571 TRBV19A0A075B6N1 114 aa11.59□□□□□ -0.55
CTSD-207ENST00000636571 TRAV25A0A0B4J276 109 aa11.59□□□□□ -0.55
CTSD-207ENST00000636571 LOC102723971A0A1B0GUV8 181 aa11.59□□□□□ -0.55
CTSD-207ENST00000636571 FAM74A7A6NL05 159 aa11.59□□□□□ -0.55
CTSD-207ENST00000636571 IFNA1P01562 189 aa11.59□□□□□ -0.55
CTSD-207ENST00000636571 BCL2P10415 239 aa11.59□□□□□ -0.55
CTSD-207ENST00000636571 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.59□□□□□ -0.55
CTSD-207ENST00000636571 EXOC3-AS1Q8N2X6 119 aa11.59□□□□□ -0.55
CTSD-207ENST00000636571 SUN5Q8TC36 379 aa11.59□□□□□ -0.55
CTSD-207ENST00000636571 GPR82Q96P67 336 aa11.59□□□□□ -0.55
CTSD-207ENST00000636571 NDUFB4O95168 129 aa11.58□□□□□ -0.56
CTSD-207ENST00000636571 ICAM4Q14773 271 aa11.58□□□□□ -0.56
CTSD-207ENST00000636571 DCANP1Q8TF63 244 aa11.58□□□□□ -0.56
CTSD-207ENST00000636571 SPAG8Q99932 426 aaPredicted RBP11.58□□□□□ -0.56
CTSD-207ENST00000636571 MANBALQ9NQG1 85 aa11.58□□□□□ -0.56
CTSD-207ENST00000636571 MED9Q9NWA0 146 aa11.58□□□□□ -0.56
CTSD-207ENST00000636571 PRKDCP78527 4128 aaKnown RBP11.58□□□□□ -0.56
CTSD-207ENST00000636571 C9JQL5 133 aa11.57□□□□□ -0.56
CTSD-207ENST00000636571 HLA-DMBP28068 263 aa11.57□□□□□ -0.56
CTSD-207ENST00000636571 CD81P60033 236 aa11.57□□□□□ -0.56
CTSD-207ENST00000636571 SUMO1P63165 101 aaKnown RBP11.57□□□□□ -0.56
CTSD-207ENST00000636571 ZNF124Q15973 351 aa11.57□□□□□ -0.56
CTSD-207ENST00000636571 TREM1Q9NP99 234 aa11.57□□□□□ -0.56
CTSD-207ENST00000636571 HELTA6NFD8 242 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 GGTLC3B5MD39 225 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 C11orf94C9JXX5 98 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 K7EIL1 84 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 DNASE2O00115 360 aaPredicted RBP11.56□□□□□ -0.56
CTSD-207ENST00000636571 PPT1P50897 306 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 ZNF506Q5JVG8 444 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 Q8N1Y9 231 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 Q9H3A6 140 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 VAX2Q9UIW0 290 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 RPH3ALQ9UNE2 315 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 PGPA6NDG6 321 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 K7EQG2 157 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 CEBPGP53567 150 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 DEFA6Q01524 100 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 ODF3L2Q3SX64 289 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 RNF182Q8N6D2 247 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 NRN1Q9NPD7 142 aa11.56□□□□□ -0.56
CTSD-207ENST00000636571 C19orf73Q9NVV2 129 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms