RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 SERTM2A0A1B0GWG4 89 aa10.02□□□□□ -0.81
LINC00540-203ENST00000631321 SYS1-DBNDD2H3BUS1 97 aa10.02□□□□□ -0.81
LINC00540-203ENST00000631321 CCL21O00585 134 aa10.02□□□□□ -0.81
LINC00540-203ENST00000631321 LY6HO94772 140 aa10.02□□□□□ -0.81
LINC00540-203ENST00000631321 KLF17Q5JT82 389 aaPredicted RBP10.02□□□□□ -0.81
LINC00540-203ENST00000631321 Q8N6K4 173 aa10.02□□□□□ -0.81
LINC00540-203ENST00000631321 ARL6IP6Q8N6S5 226 aa10.02□□□□□ -0.81
LINC00540-203ENST00000631321 STPG4Q8N801 248 aa10.02□□□□□ -0.81
LINC00540-203ENST00000631321 IGFBPL1Q8WX77 278 aa10.02□□□□□ -0.81
LINC00540-203ENST00000631321 GOLT1BQ9Y3E0 138 aa10.02□□□□□ -0.81
LINC00540-203ENST00000631321 OOSP1A8MZH6 123 aa10.02□□□□□ -0.81
LINC00540-203ENST00000631321 GNG7O60262 68 aa10.02□□□□□ -0.81
LINC00540-203ENST00000631321 LEPROTL1O95214 131 aa10.02□□□□□ -0.81
LINC00540-203ENST00000631321 ARMS2P0C7Q2 107 aa10.02□□□□□ -0.81
LINC00540-203ENST00000631321 FOSL1P15407 271 aa10.02□□□□□ -0.81
LINC00540-203ENST00000631321 COX8CQ7Z4L0 72 aa10.02□□□□□ -0.81
LINC00540-203ENST00000631321 NEU4Q8WWR8 484 aaPredicted RBP10.02□□□□□ -0.81
LINC00540-203ENST00000631321 TFPI2P48307 235 aa10.01□□□□□ -0.81
LINC00540-203ENST00000631321 ADORA2A-AS1P86434 159 aa10.01□□□□□ -0.81
LINC00540-203ENST00000631321 EBI3Q14213 229 aa10.01□□□□□ -0.81
LINC00540-203ENST00000631321 CDSNQ15517 529 aa10.01□□□□□ -0.81
LINC00540-203ENST00000631321 CCDC144NLQ6NUI1 221 aa10.01□□□□□ -0.81
LINC00540-203ENST00000631321 LINC00173Q6ZV60 143 aa10.01□□□□□ -0.81
LINC00540-203ENST00000631321 ARPC1AQ92747 370 aa10.01□□□□□ -0.81
LINC00540-203ENST00000631321 ST20Q9HBF5 79 aa10.01□□□□□ -0.81
LINC00540-203ENST00000631321 PTPRQQ9UMZ3 2332 aa10.01□□□□□ -0.81
LINC00540-203ENST00000631321 ZZEF1O43149 2961 aa10.01□□□□□ -0.81
LINC00540-203ENST00000631321 SPTBN2O15020 2390 aa10.01□□□□□ -0.81
LINC00540-203ENST00000631321 OR4C46A6NHA9 309 aa10.01□□□□□ -0.81
LINC00540-203ENST00000631321 NPSP0C0P6 89 aa10.01□□□□□ -0.81
LINC00540-203ENST00000631321 NDPQ00604 133 aa10.01□□□□□ -0.81
LINC00540-203ENST00000631321 BCL6BQ8N143 479 aaPredicted RBP10.01□□□□□ -0.81
LINC00540-203ENST00000631321 CEP295Q9C0D2 2601 aa10□□□□□ -0.81
LINC00540-203ENST00000631321 M0R3E3 92 aa10□□□□□ -0.81
LINC00540-203ENST00000631321 NDUFB8O95169 186 aa10□□□□□ -0.81
LINC00540-203ENST00000631321 HES1Q14469 280 aa10□□□□□ -0.81
LINC00540-203ENST00000631321 ZNF493Q6ZR52 646 aa10□□□□□ -0.81
LINC00540-203ENST00000631321 AAMDCQ9H7C9 122 aa10□□□□□ -0.81
LINC00540-203ENST00000631321 C21orf62Q9NYP8 219 aa10□□□□□ -0.81
LINC00540-203ENST00000631321 MINOS1Q5TGZ0 78 aa9.99□□□□□ -0.81
LINC00540-203ENST00000631321 PET117Q6UWS5 81 aa9.99□□□□□ -0.81
LINC00540-203ENST00000631321 MINOS1-NBL1R4GNA1 71 aa9.99□□□□□ -0.81
LINC00540-203ENST00000631321 TPRP12270 2363 aaKnown RBP9.99□□□□□ -0.81
LINC00540-203ENST00000631321 PSG9Q00887 426 aa9.99□□□□□ -0.81
LINC00540-203ENST00000631321 VMO1Q7Z5L0 202 aa9.99□□□□□ -0.81
LINC00540-203ENST00000631321 S4R3C0 116 aa9.99□□□□□ -0.81
LINC00540-203ENST00000631321 CT45A10P0DMU9 189 aa9.98□□□□□ -0.81
LINC00540-203ENST00000631321 DYNAPQ8N1N2 210 aa9.98□□□□□ -0.81
LINC00540-203ENST00000631321 ASCL2Q99929 193 aa9.98□□□□□ -0.81
LINC00540-203ENST00000631321 TMUB1Q9BVT8 246 aa9.98□□□□□ -0.81
LINC00540-203ENST00000631321 THYN1Q9P016 225 aa9.98□□□□□ -0.81
LINC00540-203ENST00000631321 HSPB8Q9UJY1 196 aa9.98□□□□□ -0.81
LINC00540-203ENST00000631321 FBLL1A6NHQ2 334 aaKnown RBP9.98□□□□□ -0.81
LINC00540-203ENST00000631321 RPL7P18124 248 aaKnown RBP9.98□□□□□ -0.81
LINC00540-203ENST00000631321 CSN1S1P47710 185 aa9.98□□□□□ -0.81
LINC00540-203ENST00000631321 C8orf49Q96NF6 230 aa9.98□□□□□ -0.81
LINC00540-203ENST00000631321 MAP1LC3CQ9BXW4 147 aa9.98□□□□□ -0.81
LINC00540-203ENST00000631321 TMEM191AQ9H0A3 160 aa9.98□□□□□ -0.81
LINC00540-203ENST00000631321 PTPRZ1P23471 2315 aaPredicted RBP9.98□□□□□ -0.81
LINC00540-203ENST00000631321 EGR2P11161 476 aaPredicted RBP9.97□□□□□ -0.81
LINC00540-203ENST00000631321 ZNF138P52744 262 aa9.97□□□□□ -0.81
LINC00540-203ENST00000631321 DTX2Q86UW9 622 aa9.97□□□□□ -0.81
LINC00540-203ENST00000631321 ORAOV1Q8WV07 137 aa9.97□□□□□ -0.81
LINC00540-203ENST00000631321 MSRB2Q9Y3D2 182 aa9.97□□□□□ -0.81
LINC00540-203ENST00000631321 A0A1W2PRD5 423 aa9.97□□□□□ -0.81
LINC00540-203ENST00000631321 A0A1W2PRF3 423 aa9.97□□□□□ -0.81
LINC00540-203ENST00000631321 A0A1W2PRM7 423 aa9.97□□□□□ -0.81
LINC00540-203ENST00000631321 KLRB1Q12918 225 aa9.97□□□□□ -0.81
LINC00540-203ENST00000631321 KLK9Q2XQG4 91 aa9.97□□□□□ -0.81
LINC00540-203ENST00000631321 KLK9Q9UKQ9 250 aa9.97□□□□□ -0.81
LINC00540-203ENST00000631321 U3KQK5 164 aa9.97□□□□□ -0.81
LINC00540-203ENST00000631321 ABCA4P78363 2273 aa9.97□□□□□ -0.81
LINC00540-203ENST00000631321 SH2D1AO60880 128 aa9.96□□□□□ -0.81
LINC00540-203ENST00000631321 SCGB2A1O75556 95 aa9.96□□□□□ -0.81
LINC00540-203ENST00000631321 HINT1P49773 126 aaPredicted RBP9.96□□□□□ -0.81
LINC00540-203ENST00000631321 UCNP55089 124 aa9.96□□□□□ -0.81
LINC00540-203ENST00000631321 AP5S1Q9NUS5 200 aa9.96□□□□□ -0.81
LINC00540-203ENST00000631321 NCBP2LA6PVI3 153 aaKnown RBP9.96□□□□□ -0.82
LINC00540-203ENST00000631321 CTSGP08311 255 aa9.96□□□□□ -0.82
LINC00540-203ENST00000631321 SAPCD1Q5SSQ6 148 aa9.96□□□□□ -0.82
LINC00540-203ENST00000631321 LINC01545Q5VT33 79 aa9.96□□□□□ -0.82
LINC00540-203ENST00000631321 IGHV7-81A0A0B4J1V7 117 aa9.95□□□□□ -0.82
LINC00540-203ENST00000631321 TMEM189A5PLL7 270 aa9.95□□□□□ -0.82
LINC00540-203ENST00000631321 DCHS1Q96JQ0 3298 aa9.95□□□□□ -0.82
LINC00540-203ENST00000631321 SPTA1P02549 2419 aa9.95□□□□□ -0.82
LINC00540-203ENST00000631321 hDV102S1A0JD36 115 aa9.95□□□□□ -0.82
LINC00540-203ENST00000631321 CSN3P07498 182 aa9.95□□□□□ -0.82
LINC00540-203ENST00000631321 TMEM11P17152 192 aa9.95□□□□□ -0.82
LINC00540-203ENST00000631321 ZFP36P26651 326 aaKnown RBP9.95□□□□□ -0.82
LINC00540-203ENST00000631321 LYZL1Q6UWQ5 148 aa9.95□□□□□ -0.82
LINC00540-203ENST00000631321 PRR25Q96S07 402 aa9.95□□□□□ -0.82
LINC00540-203ENST00000631321 SIRPDQ9H106 197 aa9.95□□□□□ -0.82
LINC00540-203ENST00000631321 MS4A6AQ9H2W1 248 aa9.95□□□□□ -0.82
LINC00540-203ENST00000631321 RABAC1Q9UI14 185 aa9.95□□□□□ -0.82
LINC00540-203ENST00000631321 SMAD5-AS1Q9Y6J3 95 aa9.95□□□□□ -0.82
LINC00540-203ENST00000631321 IGKV2-40A0A087WW87 121 aaPredicted RBP9.94□□□□□ -0.82
LINC00540-203ENST00000631321 OR2T8A6NH00 312 aa9.94□□□□□ -0.82
LINC00540-203ENST00000631321 IGKV2D-40P01614 121 aaPredicted RBP9.94□□□□□ -0.82
LINC00540-203ENST00000631321 PRB4P10163 310 aaPredicted RBP9.94□□□□□ -0.82
LINC00540-203ENST00000631321 FAM104BQ5XKR9 115 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms