RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 CIRBPQ14011 172 aaKnown RBP3.14□□□□□ -1.91
R3HDM1-220ENST00000628915 FAM222AQ5U5X8 452 aa3.14□□□□□ -1.91
R3HDM1-220ENST00000628915 SPTSSAQ969W0 71 aa3.14□□□□□ -1.91
R3HDM1-220ENST00000628915 C18orf12Q96KH6 178 aa3.14□□□□□ -1.91
R3HDM1-220ENST00000628915 GNB4Q9HAV0 340 aa3.14□□□□□ -1.91
R3HDM1-220ENST00000628915 ZNF581Q9P0T4 197 aa3.14□□□□□ -1.91
R3HDM1-220ENST00000628915 R4GMQ9 66 aa3.14□□□□□ -1.91
R3HDM1-220ENST00000628915 HEATR1Q9H583 2144 aaKnown RBP3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 UBE2L5PA0A1B0GUS4 154 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 TIMM17BO60830 172 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 QRFPP83859 136 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 FHL1Q13642 323 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 FHL3Q13643 280 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 PRR26Q8N8Z3 221 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 HIST1H4GQ99525 98 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 AICDAQ9GZX7 198 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 HELZP42694 1942 aaKnown RBP3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 PLXNA4Q9HCM2 1894 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 FAM90A26D6RGX4 464 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 C11orf98E9PRG8 122 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 ZIC3O60481 467 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 SPINK4O60575 86 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 APCSP02743 223 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 Q1RN00 199 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 LYZL2Q7Z4W2 148 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 ELSPBP1Q96BH3 223 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 PRO3102Q9H379 93 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 TAC3Q9UHF0 121 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 SERP1Q9Y6X1 66 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 PTPRDP23468 1912 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 CXorf51AA0A1B0GTR3 108 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 K7EMT4 169 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 SSSCA1O60232 199 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 PDCD6O75340 191 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 RNASE2P10153 161 aaKnown RBP3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 COX5AP20674 150 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 BEAN1Q3B7T3 259 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 LINC00114Q6XXX2 140 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 ZAR1Q86SH2 424 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 TXNDC17Q9BRA2 123 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 MPC1Q9Y5U8 109 aa3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 KIF26AQ9ULI4 1882 aaPredicted RBP3.13□□□□□ -1.91
R3HDM1-220ENST00000628915 TRBV20OR9-2A0A075B6H5 130 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 HLA-DRB4P13762 266 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 GYPEP15421 78 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 SFTPA2Q8IWL1 248 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 SFTPA1Q8IWL2 248 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 Q8N976 141 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 NUP35Q8NFH5 326 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 ZPLD1Q8TCW7 415 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 TMEM133Q9H2Q1 129 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 HLA-DRB4X5D2U9 266 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 MYO16Q9Y6X6 1858 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 TDRD6O60522 2096 aaKnown RBP3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 A0A1W2PS18 150 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 ZNF823P16415 610 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 IGFBP6P24592 240 aaPredicted RBP3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 LYPD6Q86Y78 171 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 ZNF837Q96EG3 531 aaPredicted RBP3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 ARHGAP5-AS1Q96IT6 56 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 SCN2AQ99250 2005 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 DOCK11Q5JSL3 2073 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 CTXND1A0A1B0GTU2 59 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 M0R2P5 195 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 NDUFS5O43920 106 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 CLDN14O95500 239 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 CA6P23280 308 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 LINC00311Q8N616 119 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 OR52N5Q8NH56 324 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 IMUPQ9GZP8 106 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 TIMM9Q9Y5J7 89 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 PLXNB3Q9ULL4 1909 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 CELSR1Q9NYQ6 3014 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 IGLL5B9A064 214 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 WISP1O95388 367 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 IFI6P09912 130 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 PSMG4Q5JS54 123 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 LINC01545Q5VT33 79 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 Q6ZQT7 251 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 FANCD2OSQ96PS1 177 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 C11orf1Q9H5F2 150 aa3.12□□□□□ -1.91
R3HDM1-220ENST00000628915 HOXA3O43365 443 aaPredicted RBP3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 NCR2O95944 276 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 ASAH2BP0C7U1 165 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 HBBP68871 147 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 CST6Q15828 149 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 LGALS9BQ3B8N2 356 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 ZNF793Q6ZN11 406 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 GTSF1Q8WW33 167 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 AJUBAQ96IF1 538 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 PLA2G2FQ9BZM2 168 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 IL36BQ9NZH7 164 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 RBM12B-AS1Q9P1G2 102 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 TP53TG3Q9ULZ0 132 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 LCE2CQ5TA81 110 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 MPLKIPQ8TAP9 179 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 IL1F10Q8WWZ1 152 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 CALYQ9NYX4 217 aa3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.11□□□□□ -1.91
R3HDM1-220ENST00000628915 IGHV5-51A0A0C4DH38 117 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms