RNA–Protein interactions for RNA: ENST00000622493.4

CLTCL1-212, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2 BASIC

Gene CLTCL1, Length 1,714 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-212ENST00000622493 HIST1H1EP10412 219 aaKnown RBP10.89□□□□□ -0.67
CLTCL1-212ENST00000622493 KLHL30-AS1Q8NEE0 82 aa10.89□□□□□ -0.67
CLTCL1-212ENST00000622493 OR4F17Q8NGA8 305 aa10.89□□□□□ -0.67
CLTCL1-212ENST00000622493 OR4F4Q96R69 305 aa10.89□□□□□ -0.67
CLTCL1-212ENST00000622493 DAZ1Q9NQZ3 744 aaKnown RBP10.89□□□□□ -0.67
CLTCL1-212ENST00000622493 UFC1Q9Y3C8 167 aa10.89□□□□□ -0.67
CLTCL1-212ENST00000622493 A0A1W2PS18 150 aa10.89□□□□□ -0.67
CLTCL1-212ENST00000622493 LGALS9O00182 355 aa10.89□□□□□ -0.67
CLTCL1-212ENST00000622493 NBEAP1P0C6P0 100 aa10.89□□□□□ -0.67
CLTCL1-212ENST00000622493 CD28P10747 220 aa10.89□□□□□ -0.67
CLTCL1-212ENST00000622493 FOXL1Q12952 345 aa10.89□□□□□ -0.67
CLTCL1-212ENST00000622493 REC114Q7Z4M0 266 aa10.89□□□□□ -0.67
CLTCL1-212ENST00000622493 OR8I2Q8N0Y5 310 aa10.89□□□□□ -0.67
CLTCL1-212ENST00000622493 C11orf94C9JXX5 98 aa10.88□□□□□ -0.67
CLTCL1-212ENST00000622493 LINC01619G3V211 115 aa10.88□□□□□ -0.67
CLTCL1-212ENST00000622493 MRPS12O15235 138 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-212ENST00000622493 HOXD3P31249 432 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-212ENST00000622493 SRSF2Q01130 221 aaKnown RBP10.88□□□□□ -0.67
CLTCL1-212ENST00000622493 CST9LP1Q5W188 147 aa10.88□□□□□ -0.67
CLTCL1-212ENST00000622493 OR11H1Q8NG94 326 aa10.88□□□□□ -0.67
CLTCL1-212ENST00000622493 DPF1Q92782 380 aa10.88□□□□□ -0.67
CLTCL1-212ENST00000622493 CITED2Q99967 270 aaPredicted RBP10.88□□□□□ -0.67
CLTCL1-212ENST00000622493 A8MWP6 167 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 B4DEV8 164 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 PDE6DO43924 150 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 IGLC2P0DOY2 106 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 NDUFA6P56556 154 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 UBE2G2P60604 165 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 DEFA6Q01524 100 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 C18orf65Q6ZTR6 163 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 OR1N2Q8NGR9 330 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 TVP23CQ96ET8 276 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 GRAMD2BQ96HH9 432 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 TMEM250H0YL14 139 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 H3BQ15 152 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 SRP19P09132 144 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 BMI1P35226 326 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 KLF5Q13887 457 aaPredicted RBP10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 PDE6HQ13956 83 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 ZNF674Q2M3X9 581 aa10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 YTHDF2Q9Y5A9 579 aaKnown RBP10.87□□□□□ -0.67
CLTCL1-212ENST00000622493 IGHV7-4-1A0A0J9YVY3 117 aa10.86□□□□□ -0.67
CLTCL1-212ENST00000622493 ZNF207O43670 478 aaKnown RBP10.86□□□□□ -0.67
CLTCL1-212ENST00000622493 GALR1P47211 349 aa10.86□□□□□ -0.67
CLTCL1-212ENST00000622493 ELOBQ15370 118 aa10.86□□□□□ -0.67
CLTCL1-212ENST00000622493 PYY3Q5JQD4 70 aa10.86□□□□□ -0.67
CLTCL1-212ENST00000622493 C16orf54Q6UWD8 224 aa10.86□□□□□ -0.67
CLTCL1-212ENST00000622493 LYPD1Q8N2G4 141 aa10.86□□□□□ -0.67
CLTCL1-212ENST00000622493 C11orf44Q8N8P7 122 aa10.86□□□□□ -0.67
CLTCL1-212ENST00000622493 ZNF586Q9NXT0 402 aa10.86□□□□□ -0.67
CLTCL1-212ENST00000622493 C2CD3Q4AC94 2353 aa10.86□□□□□ -0.67
CLTCL1-212ENST00000622493 TRBV19A0A075B6N1 114 aa10.85□□□□□ -0.67
CLTCL1-212ENST00000622493 F6UZH7 168 aa10.85□□□□□ -0.67
CLTCL1-212ENST00000622493 APOHP02749 345 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-212ENST00000622493 ATP5G3P48201 142 aa10.85□□□□□ -0.67
CLTCL1-212ENST00000622493 SYNJ2BPP57105 145 aa10.85□□□□□ -0.67
CLTCL1-212ENST00000622493 DEFB136Q30KP8 78 aa10.85□□□□□ -0.67
CLTCL1-212ENST00000622493 TM4SF20Q53R12 229 aa10.85□□□□□ -0.67
CLTCL1-212ENST00000622493 C8orf86Q6ZUL3 223 aa10.85□□□□□ -0.67
CLTCL1-212ENST00000622493 BLNKQ8WV28 456 aa10.85□□□□□ -0.67
CLTCL1-212ENST00000622493 NIPSNAP3BQ9BS92 247 aa10.85□□□□□ -0.67
CLTCL1-212ENST00000622493 ELOVL1Q9BW60 279 aa10.85□□□□□ -0.67
CLTCL1-212ENST00000622493 SMPXQ9UHP9 88 aa10.85□□□□□ -0.67
CLTCL1-212ENST00000622493 ZNF253O75346 499 aa10.84□□□□□ -0.67
CLTCL1-212ENST00000622493 FHL3Q13643 280 aa10.84□□□□□ -0.67
CLTCL1-212ENST00000622493 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.84□□□□□ -0.67
CLTCL1-212ENST00000622493 A0A087X0K7 114 aa10.84□□□□□ -0.67
CLTCL1-212ENST00000622493 TMEM213A2RRL7 107 aa10.84□□□□□ -0.67
CLTCL1-212ENST00000622493 MYCNOSP40205 109 aa10.84□□□□□ -0.67
CLTCL1-212ENST00000622493 RANP62826 216 aaKnown RBP10.84□□□□□ -0.67
CLTCL1-212ENST00000622493 SUMO1P63165 101 aaKnown RBP10.84□□□□□ -0.67
CLTCL1-212ENST00000622493 SIGLEC15Q6ZMC9 328 aa10.84□□□□□ -0.67
CLTCL1-212ENST00000622493 NDUFA11Q86Y39 141 aa10.84□□□□□ -0.67
CLTCL1-212ENST00000622493 CYB561D1Q8N8Q1 229 aa10.84□□□□□ -0.67
CLTCL1-212ENST00000622493 GLMPQ8WWB7 406 aa10.84□□□□□ -0.67
CLTCL1-212ENST00000622493 RHPN1-AS1Q9BWJ2 59 aa10.84□□□□□ -0.67
CLTCL1-212ENST00000622493 TMEM242Q9NWH2 141 aa10.84□□□□□ -0.67
CLTCL1-212ENST00000622493 PEMTQ9UBM1 199 aa10.84□□□□□ -0.67
CLTCL1-212ENST00000622493 IGHV3OR16-13A0A075B7E8 117 aa10.83□□□□□ -0.68
CLTCL1-212ENST00000622493 IGHV3-74A0A0B4J1X5 117 aa10.83□□□□□ -0.68
CLTCL1-212ENST00000622493 IGHV3-66A0A0C4DH42 116 aa10.83□□□□□ -0.68
CLTCL1-212ENST00000622493 IFITM10A6NMD0 228 aa10.83□□□□□ -0.68
CLTCL1-212ENST00000622493 GGTLC3B5MD39 225 aa10.83□□□□□ -0.68
CLTCL1-212ENST00000622493 CCL24O00175 119 aa10.83□□□□□ -0.68
CLTCL1-212ENST00000622493 CHEK1O14757 476 aa10.83□□□□□ -0.68
CLTCL1-212ENST00000622493 PPP1R2P9O14990 202 aa10.83□□□□□ -0.68
CLTCL1-212ENST00000622493 PSG9Q00887 426 aa10.83□□□□□ -0.68
CLTCL1-212ENST00000622493 RAX2Q96IS3 184 aa10.83□□□□□ -0.68
CLTCL1-212ENST00000622493 SMAD5-AS1Q9Y6J3 95 aa10.83□□□□□ -0.68
CLTCL1-212ENST00000622493 IGHV3-49A0A0A0MS15 119 aa10.82□□□□□ -0.68
CLTCL1-212ENST00000622493 A0A1W2PRX2 142 aa10.82□□□□□ -0.68
CLTCL1-212ENST00000622493 HELTA6NFD8 242 aa10.82□□□□□ -0.68
CLTCL1-212ENST00000622493 ZNF785A8K8V0 405 aa10.82□□□□□ -0.68
CLTCL1-212ENST00000622493 ZNF727A8MUV8 499 aa10.82□□□□□ -0.68
CLTCL1-212ENST00000622493 HIST1H2BKO60814 126 aa10.82□□□□□ -0.68
CLTCL1-212ENST00000622493 NDUFB4O95168 129 aa10.82□□□□□ -0.68
CLTCL1-212ENST00000622493 HIST1H2BJP06899 126 aa10.82□□□□□ -0.68
CLTCL1-212ENST00000622493 SNRPCP09234 159 aaKnown RBP10.82□□□□□ -0.68
CLTCL1-212ENST00000622493 HIST1H2BOP23527 126 aa10.82□□□□□ -0.68
CLTCL1-212ENST00000622493 HIST1H2BBP33778 126 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms