RNA–Protein interactions for RNA: ENST00000622171.1

LINC00649-219, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 207 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-219ENST00000622171 FOXI2Q6ZQN5 318 aa3.19□□□□□ -1.9
LINC00649-219ENST00000622171 Q6ZQT7 251 aa3.19□□□□□ -1.9
LINC00649-219ENST00000622171 LINC00305Q7Z4B0 112 aa3.19□□□□□ -1.9
LINC00649-219ENST00000622171 TMEM144Q7Z5S9 345 aa3.19□□□□□ -1.9
LINC00649-219ENST00000622171 NRARPQ7Z6K4 114 aa3.19□□□□□ -1.9
LINC00649-219ENST00000622171 OR10P1Q8NGE3 313 aa3.19□□□□□ -1.9
LINC00649-219ENST00000622171 LRRC20Q8TCA0 184 aa3.19□□□□□ -1.9
LINC00649-219ENST00000622171 C2CD4CQ8TF44 421 aa3.19□□□□□ -1.9
LINC00649-219ENST00000622171 SMIM8Q96KF7 97 aa3.19□□□□□ -1.9
LINC00649-219ENST00000622171 SHANK2-AS3Q9BTD1 123 aa3.19□□□□□ -1.9
LINC00649-219ENST00000622171 RPRMQ9NS64 109 aa3.19□□□□□ -1.9
LINC00649-219ENST00000622171 APLNQ9ULZ1 77 aa3.19□□□□□ -1.9
LINC00649-219ENST00000622171 RPH3ALQ9UNE2 315 aa3.19□□□□□ -1.9
LINC00649-219ENST00000622171 YTHDF2Q9Y5A9 579 aaKnown RBP3.19□□□□□ -1.9
LINC00649-219ENST00000622171 HSPG2P98160 4391 aa3.19□□□□□ -1.9
LINC00649-219ENST00000622171 IGKV2-40A0A087WW87 121 aaPredicted RBP3.18□□□□□ -1.9
LINC00649-219ENST00000622171 TRAV10A0A0B4J240 114 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 H0YIZ8 118 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 ISLRO14498 428 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 MRPS12O15235 138 aaKnown RBP3.18□□□□□ -1.9
LINC00649-219ENST00000622171 CRXO43186 299 aaPredicted RBP3.18□□□□□ -1.9
LINC00649-219ENST00000622171 TSC22D2O75157 780 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 UPK1BO75841 260 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 INSP01308 110 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 IGKV2D-40P01614 121 aaPredicted RBP3.18□□□□□ -1.9
LINC00649-219ENST00000622171 CD5P06127 495 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 OR10J4P0C629 311 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 CXCL3P19876 107 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 CAMLGP49069 296 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 AP2S1P53680 142 aaPredicted RBP3.18□□□□□ -1.9
LINC00649-219ENST00000622171 CMC4P56277 68 aaPredicted RBP3.18□□□□□ -1.9
LINC00649-219ENST00000622171 C10orf113Q5VZT2 155 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 TMEM88Q6PEY1 159 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 TEPPQ6URK8 271 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 ZNF705AQ6ZN79 300 aaPredicted RBP3.18□□□□□ -1.9
LINC00649-219ENST00000622171 MIR17HGQ75NE6 70 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 UBE2DNLQ8IWF7 75 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 EXOC3-AS1Q8N2X6 119 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 TMEM37Q8WXS4 190 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 RPUSD4Q96CM3 377 aaKnown RBP3.18□□□□□ -1.9
LINC00649-219ENST00000622171 C2orf50Q96LR7 162 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 C11orf1Q9H5F2 150 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 UQCC1Q9NVA1 299 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 PPP1R14DQ9NXH3 145 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 SLC45A2Q9UMX9 530 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 GOLT1BQ9Y3E0 138 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 PXMP4Q9Y6I8 212 aa3.18□□□□□ -1.9
LINC00649-219ENST00000622171 TRAV12-3A0A0B4J271 114 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 A0A0J9YY99 117 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 BOLA2-SMG1P6H3BVE0 249 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 HMGB3O15347 200 aaKnown RBP3.17□□□□□ -1.9
LINC00649-219ENST00000622171 SSNA1O43805 119 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 NUDT3O95989 172 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 HBE1P02100 147 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 RPL7P18124 248 aaKnown RBP3.17□□□□□ -1.9
LINC00649-219ENST00000622171 NUP62P37198 522 aaPredicted RBP3.17□□□□□ -1.9
LINC00649-219ENST00000622171 B2MP61769 119 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 DAD1P61803 113 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 NUTF2P61970 127 aaKnown RBP3.17□□□□□ -1.9
LINC00649-219ENST00000622171 BTN1A1Q13410 526 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 ASAH1Q13510 395 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 PSG3Q16557 428 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 RRN3P1Q2M238 152 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 PRR9Q5T870 116 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 GFI1BQ5VTD9 330 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 MZT2BQ6NZ67 158 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 FAM122CQ6P4D5 195 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 ZNF546Q86UE3 836 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 TMEM252Q8N6L7 170 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 OR8A1Q8NGG7 326 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 OR5C1Q8NGR4 320 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 Q8TAT8 98 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 LINC01587Q99440 93 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 CCDC32Q9BV29 185 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 C1QTNF4Q9BXJ3 329 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 NPVFQ9HCQ7 196 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 ZNF586Q9NXT0 402 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 DKK2Q9UBU2 259 aa3.17□□□□□ -1.9
LINC00649-219ENST00000622171 GAGE12BA1L429 117 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 PLAC8L1A1L4L8 177 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 A6NHS1 94 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 F5H768 121 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 INMT-MINDY4F8WBC2 141 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 GAGE7O76087 117 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 IGHV3-53P01767 116 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 GAGE12FP0CL80 117 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 GAGE12GP0CL81 117 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 GAGE12IP0CL82 117 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 SPART-AS1P0CW21 52 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 PVALBP20472 110 aaPredicted RBP3.16□□□□□ -1.9
LINC00649-219ENST00000622171 FUSP35637 526 aaKnown RBP eCLIP3.16□□□□□ -1.9
LINC00649-219ENST00000622171 MEOX2P50222 304 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 SULT1A1P50225 295 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 H2BFSP57053 126 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 C1orf194Q5T5A4 169 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 LGALS9CQ6DKI2 356 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 STX12Q86Y82 276 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 PHYHIPLQ96FC7 376 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 SGK494Q96LW2 274 aa3.16□□□□□ -1.9
LINC00649-219ENST00000622171 IGF2BP2-AS1Q96M15 143 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms