RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 AGMATQ9BSE5 352 aa7.43□□□□□ -1.22
GGA3-223ENST00000621870 LIME1Q9H400 295 aa7.43□□□□□ -1.22
GGA3-223ENST00000621870 H7C2G1 150 aa7.43□□□□□ -1.22
GGA3-223ENST00000621870 LEPP41159 167 aa7.43□□□□□ -1.22
GGA3-223ENST00000621870 SSBP4Q9BWG4 385 aaPredicted RBP7.43□□□□□ -1.22
GGA3-223ENST00000621870 A0A087X0M5 115 aa7.43□□□□□ -1.22
GGA3-223ENST00000621870 A0A1B0GX30 115 aa7.43□□□□□ -1.22
GGA3-223ENST00000621870 FAM223BA6NKX1 122 aa7.43□□□□□ -1.22
GGA3-223ENST00000621870 C15orf65H3BRN8 121 aa7.43□□□□□ -1.22
GGA3-223ENST00000621870 M0R143 59 aa7.43□□□□□ -1.22
GGA3-223ENST00000621870 IGHV3-53P01767 116 aa7.43□□□□□ -1.22
GGA3-223ENST00000621870 FAM223AQ8IWN6 122 aa7.43□□□□□ -1.22
GGA3-223ENST00000621870 C11orf53Q8IXP5 236 aa7.43□□□□□ -1.22
GGA3-223ENST00000621870 TRGV1A0A0A0MS02 117 aa7.42□□□□□ -1.22
GGA3-223ENST00000621870 PPP1R17O96001 155 aa7.42□□□□□ -1.22
GGA3-223ENST00000621870 Q6AWC8 147 aa7.42□□□□□ -1.22
GGA3-223ENST00000621870 HECTD1Q9ULT8 2610 aa7.42□□□□□ -1.22
GGA3-223ENST00000621870 CD5P06127 495 aa7.42□□□□□ -1.22
GGA3-223ENST00000621870 GZMBP10144 247 aa7.42□□□□□ -1.22
GGA3-223ENST00000621870 CMC4P56277 68 aaPredicted RBP7.42□□□□□ -1.22
GGA3-223ENST00000621870 ZNF415Q09FC8 603 aa7.42□□□□□ -1.22
GGA3-223ENST00000621870 ATOH7Q8N100 152 aa7.42□□□□□ -1.22
GGA3-223ENST00000621870 ORMDL3Q8N138 153 aa7.42□□□□□ -1.22
GGA3-223ENST00000621870 APOHP02749 345 aaPredicted RBP7.42□□□□□ -1.22
GGA3-223ENST00000621870 ZNF138P52744 262 aa7.42□□□□□ -1.22
GGA3-223ENST00000621870 LCN12Q6JVE5 192 aa7.42□□□□□ -1.22
GGA3-223ENST00000621870 LURAP1LQ8IV03 231 aa7.42□□□□□ -1.22
GGA3-223ENST00000621870 DEFB104AQ8WTQ1 72 aa7.42□□□□□ -1.22
GGA3-223ENST00000621870 NCOR1P1Q9H4R4 102 aa7.42□□□□□ -1.22
GGA3-223ENST00000621870 DEFB130BP0DP73 79 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 DEFB130AP0DP74 79 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 GFI1BQ5VTD9 330 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 CHCHD5Q9BSY4 110 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 TMEM160Q9NX00 188 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 VPS13AQ96RL7 3174 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 IGHV3-73A0A0B4J1V6 119 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 NDUFS6O75380 124 aaKnown RBP7.41□□□□□ -1.22
GGA3-223ENST00000621870 WT1-ASQ06250 92 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 TCTEX1D4Q5JR98 221 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 LINC00311Q8N616 119 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 MBD3L1Q8WWY6 194 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 NRN1Q9NPD7 142 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 XCL2Q9UBD3 114 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 CHD3Q12873 2000 aaKnown RBP7.41□□□□□ -1.22
GGA3-223ENST00000621870 A0A087WX48 190 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 J3QR89 54 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 IGLV3-1P01715 115 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 IGHV4-38-2P0DP08 117 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 FAM120AOSQ5T036 256 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 ZNF833PQ6ZTB9 187 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 TMEM14BQ9NUH8 114 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 USP34Q70CQ2 3546 aa7.41□□□□□ -1.22
GGA3-223ENST00000621870 MAST4O15021 2626 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 TRGV11A0A075B6L2 103 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 IGKV3D-20A0A0C4DH25 116 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 A0A1B0GV90 55 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 FGF16O43320 207 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 TCRAP04437 139 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 TMEM95Q3KNT9 176 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 SCGB3A1Q96QR1 104 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 FGF23Q9GZV9 251 aaPredicted RBP7.4□□□□□ -1.22
GGA3-223ENST00000621870 NDUFA4L2Q9NRX3 87 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 JKAMPQ9P055 326 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 ARHGAP32A7KAX9 2087 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 FOLR2P14207 255 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 PRR31Q5SQ13 230 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 C10orf105Q8TEF2 133 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 RCHY1Q96PM5 261 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 DERL1Q9BUN8 251 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 PRDM13Q9H4Q3 707 aa7.4□□□□□ -1.22
GGA3-223ENST00000621870 TRBV9A0A0B4J1U6 114 aa7.4□□□□□ -1.23
GGA3-223ENST00000621870 TRAV8-6A0A0B4J262 113 aa7.4□□□□□ -1.23
GGA3-223ENST00000621870 LGALS3P17931 250 aaKnown RBP7.4□□□□□ -1.23
GGA3-223ENST00000621870 OR10J3Q5JRS4 329 aa7.4□□□□□ -1.23
GGA3-223ENST00000621870 GTF2H5Q6ZYL4 71 aa7.4□□□□□ -1.23
GGA3-223ENST00000621870 C1QTNF4Q9BXJ3 329 aa7.4□□□□□ -1.23
GGA3-223ENST00000621870 PRORYQ9H606 182 aa7.4□□□□□ -1.23
GGA3-223ENST00000621870 DMRT1Q9Y5R6 373 aa7.4□□□□□ -1.23
GGA3-223ENST00000621870 TOMM40O96008 361 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 IGKV1-39P01597 117 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 IGKV1D-39P04432 117 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 BLCAPP62952 87 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 FAM19A2Q8N3H0 131 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 SRSF8Q9BRL6 282 aaKnown RBP7.39□□□□□ -1.23
GGA3-223ENST00000621870 LINC01619G3V211 115 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 CIRBPQ14011 172 aaKnown RBP7.39□□□□□ -1.23
GGA3-223ENST00000621870 MSMPQ1L6U9 139 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 HIST2H2BCQ6DN03 193 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 TCF23Q7RTU1 214 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 OR4C5Q8NGB2 326 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 ZNF414Q96IQ9 312 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 TMEM70Q9BUB7 260 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 VPREB3Q9UKI3 123 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 DAZAP2Q15038 168 aaPredicted RBP7.39□□□□□ -1.23
GGA3-223ENST00000621870 OR11H2Q8NH07 326 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 LINC00479Q96M42 142 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 OSTCQ9NRP0 149 aa7.39□□□□□ -1.23
GGA3-223ENST00000621870 ADCYAP1P18509 176 aa7.38□□□□□ -1.23
GGA3-223ENST00000621870 LYRM7Q5U5X0 104 aa7.38□□□□□ -1.23
GGA3-223ENST00000621870 OR13C6PQ8NH95 151 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms