RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 NPIPB5A8MRT5 1133 aa6.75□□□□□ -1.33
ALMS1-208ENST00000620466 ZNF134P52741 427 aa6.75□□□□□ -1.33
ALMS1-208ENST00000620466 MINOS1Q5TGZ0 78 aa6.75□□□□□ -1.33
ALMS1-208ENST00000620466 ZNF833PQ6ZTB9 187 aa6.75□□□□□ -1.33
ALMS1-208ENST00000620466 Q6ZWC4 215 aa6.75□□□□□ -1.33
ALMS1-208ENST00000620466 Q86TA4 180 aa6.75□□□□□ -1.33
ALMS1-208ENST00000620466 ORAOV1Q8WV07 137 aa6.75□□□□□ -1.33
ALMS1-208ENST00000620466 MINOS1-NBL1R4GNA1 71 aa6.75□□□□□ -1.33
ALMS1-208ENST00000620466 TRAV8-1A0A0A6YYK1 113 aa6.75□□□□□ -1.33
ALMS1-208ENST00000620466 A0A0U1RRA0 63 aa6.75□□□□□ -1.33
ALMS1-208ENST00000620466 H3BUX3 64 aa6.75□□□□□ -1.33
ALMS1-208ENST00000620466 NCR2O95944 276 aa6.75□□□□□ -1.33
ALMS1-208ENST00000620466 GATD1Q8NB37 220 aa6.75□□□□□ -1.33
ALMS1-208ENST00000620466 ZNF138P52744 262 aa6.74□□□□□ -1.33
ALMS1-208ENST00000620466 NDUFA4L2Q9NRX3 87 aa6.74□□□□□ -1.33
ALMS1-208ENST00000620466 SYS1-DBNDD2H3BUS1 97 aa6.74□□□□□ -1.33
ALMS1-208ENST00000620466 SFTA2Q6UW10 78 aa6.74□□□□□ -1.33
ALMS1-208ENST00000620466 C3orf56Q8N813 242 aa6.74□□□□□ -1.33
ALMS1-208ENST00000620466 A0A1W2PPI3 338 aa6.74□□□□□ -1.33
ALMS1-208ENST00000620466 TMEM8BA6NDV4 472 aa6.74□□□□□ -1.33
ALMS1-208ENST00000620466 M0R1W7 72 aa6.74□□□□□ -1.33
ALMS1-208ENST00000620466 KLF17Q5JT82 389 aaPredicted RBP6.74□□□□□ -1.33
ALMS1-208ENST00000620466 IFI27L1Q96BM0 104 aa6.74□□□□□ -1.33
ALMS1-208ENST00000620466 C5orf30Q96GV9 206 aa6.74□□□□□ -1.33
ALMS1-208ENST00000620466 SNHG12Q9BXW3 62 aa6.74□□□□□ -1.33
ALMS1-208ENST00000620466 M0R2P5 195 aa6.74□□□□□ -1.33
ALMS1-208ENST00000620466 INSP01308 110 aa6.74□□□□□ -1.33
ALMS1-208ENST00000620466 RPRMLQ8N4K4 120 aa6.74□□□□□ -1.33
ALMS1-208ENST00000620466 MUC22E2RYF6 1773 aaPredicted RBP6.73□□□□□ -1.33
ALMS1-208ENST00000620466 YPEL3P61236 119 aaPredicted RBP6.73□□□□□ -1.33
ALMS1-208ENST00000620466 ASPHD1Q5U4P2 390 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 CABIN1Q9Y6J0 2220 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 SMIM27A0A1W2PRY6 76 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 GGTLC3B5MD39 225 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 ERCC8Q13216 396 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 PIP4P2Q8N4L2 257 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 UBE2E2Q96LR5 201 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 MCRIP2Q9BUT9 160 aaKnown RBP6.73□□□□□ -1.33
ALMS1-208ENST00000620466 GFRA4Q9GZZ7 299 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 K7EN84 100 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 FCN3O75636 299 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 RNF5Q99942 180 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 A0A087WX48 190 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 COL8A2P25067 703 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 RUSC1-AS1Q66K80 236 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 C18orf32Q8TCD1 76 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 Q8TCH9 128 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 CITED1Q99966 193 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 C20orf144Q9BQM9 153 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 NHP2Q9NX24 153 aaKnown RBP6.73□□□□□ -1.33
ALMS1-208ENST00000620466 VWC2Q2TAL6 325 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 TMEM131Q92545 1883 aa6.73□□□□□ -1.33
ALMS1-208ENST00000620466 A0A087X0K7 114 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 PPBPP02775 128 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 IGFL4Q6B9Z1 124 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 SP5Q6BEB4 398 aaPredicted RBP6.72□□□□□ -1.33
ALMS1-208ENST00000620466 TMEM190Q8WZ59 177 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 RNF114Q9Y508 228 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 SLC25A16P16260 332 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 GATA4P43694 442 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 HSD52Q0P140 79 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 MORN3Q6PF18 240 aaPredicted RBP6.72□□□□□ -1.33
ALMS1-208ENST00000620466 C11orf53Q8IXP5 236 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 Q8TAT8 98 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 IGLV1-44P01699 117 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 CD300EQ496F6 205 aaPredicted RBP6.72□□□□□ -1.33
ALMS1-208ENST00000620466 F8WEM9 126 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 PLNP26678 52 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 SSBP2P81877 361 aaPredicted RBP6.72□□□□□ -1.33
ALMS1-208ENST00000620466 GUSBP1Q15486 140 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 MPV17L2Q567V2 206 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 LSM4Q9Y4Z0 139 aaKnown RBP6.72□□□□□ -1.33
ALMS1-208ENST00000620466 SEC11AP67812 179 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 Q96MF0 132 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 NCOR1P1Q9H4R4 102 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 ZNF492Q9P255 531 aa6.72□□□□□ -1.33
ALMS1-208ENST00000620466 RNF223E7ERA6 249 aa6.71□□□□□ -1.33
ALMS1-208ENST00000620466 RPL36AP83881 106 aaKnown RBP6.71□□□□□ -1.33
ALMS1-208ENST00000620466 SLAQ13239 276 aa6.71□□□□□ -1.33
ALMS1-208ENST00000620466 TEX43Q6ZNM6 134 aa6.71□□□□□ -1.33
ALMS1-208ENST00000620466 Q6ZS92 163 aa6.71□□□□□ -1.33
ALMS1-208ENST00000620466 RPL36ALQ969Q0 106 aaKnown RBP6.71□□□□□ -1.33
ALMS1-208ENST00000620466 RP1P56715 2156 aa6.71□□□□□ -1.34
ALMS1-208ENST00000620466 C8orf49Q96NF6 230 aa6.71□□□□□ -1.34
ALMS1-208ENST00000620466 SHANK2-AS3Q9BTD1 123 aa6.71□□□□□ -1.34
ALMS1-208ENST00000620466 JPT2Q9H910 190 aa6.71□□□□□ -1.34
ALMS1-208ENST00000620466 SMKR1H3BMG3 65 aa6.71□□□□□ -1.34
ALMS1-208ENST00000620466 MMP23AO75900 390 aa6.71□□□□□ -1.34
ALMS1-208ENST00000620466 RASL10AQ92737 203 aa6.71□□□□□ -1.34
ALMS1-208ENST00000620466 E7EQL1 145 aa6.71□□□□□ -1.34
ALMS1-208ENST00000620466 TMEM249Q2WGJ8 235 aa6.71□□□□□ -1.34
ALMS1-208ENST00000620466 LYPD1Q8N2G4 141 aa6.71□□□□□ -1.34
ALMS1-208ENST00000620466 TMEM75Q8N9X5 138 aa6.71□□□□□ -1.34
ALMS1-208ENST00000620466 USMG5Q96IX5 58 aa6.71□□□□□ -1.34
ALMS1-208ENST00000620466 ATXN8Q156A1 80 aa6.71□□□□□ -1.34
ALMS1-208ENST00000620466 C5orf64Q2M2E5 130 aa6.71□□□□□ -1.34
ALMS1-208ENST00000620466 MED12Q93074 2177 aa6.71□□□□□ -1.34
ALMS1-208ENST00000620466 SRRM4A7MD48 611 aaKnown RBP6.7□□□□□ -1.34
ALMS1-208ENST00000620466 ZNF876PQ49A33 203 aa6.7□□□□□ -1.34
ALMS1-208ENST00000620466 NAA38Q9BRA0 125 aaKnown RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms