RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 PGLYRP4Q96LB8 373 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 KIR2DL4Q99706 377 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 MRPL32Q9BYC8 188 aaKnown RBP8.31□□□□□ -1.08
VPS11-207ENST00000620429 OOEPA6NGQ2 149 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 UCNP55089 124 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 FAM159AQ6UWV7 190 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 OR5AN1Q8NGI8 311 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 RFESDQ8TAC1 157 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 DNAJC30Q96LL9 226 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 ZNF492Q9P255 531 aa8.31□□□□□ -1.08
VPS11-207ENST00000620429 C8orf88P0DMB2 117 aa8.3□□□□□ -1.08
VPS11-207ENST00000620429 ASIPP42127 132 aa8.3□□□□□ -1.08
VPS11-207ENST00000620429 ATP5IP56385 69 aaPredicted RBP8.3□□□□□ -1.08
VPS11-207ENST00000620429 MEIG1Q5JSS6 88 aa8.3□□□□□ -1.08
VPS11-207ENST00000620429 FAM173AQ9BQD7 235 aa8.3□□□□□ -1.08
VPS11-207ENST00000620429 TTTY12Q9BZ98 90 aa8.3□□□□□ -1.08
VPS11-207ENST00000620429 CNOT1A5YKK6 2376 aaKnown RBP8.3□□□□□ -1.08
VPS11-207ENST00000620429 IGKV2D-26A0A0A0MRZ7 120 aa8.3□□□□□ -1.08
VPS11-207ENST00000620429 TFF1P04155 84 aa8.3□□□□□ -1.08
VPS11-207ENST00000620429 EVI2AP22794 236 aa8.3□□□□□ -1.08
VPS11-207ENST00000620429 MDP1Q86V88 176 aa8.3□□□□□ -1.08
VPS11-207ENST00000620429 AJUBAQ96IF1 538 aa8.3□□□□□ -1.08
VPS11-207ENST00000620429 PRORYQ9H606 182 aa8.3□□□□□ -1.08
VPS11-207ENST00000620429 MDFICQ9P1T7 246 aa8.3□□□□□ -1.08
VPS11-207ENST00000620429 LAMA5O15230 3695 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 CHD6Q8TD26 2715 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 C19orf71A6NCJ1 209 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 SMIM9A6NGZ8 99 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 WNT9BO14905 357 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 FCGR3BO75015 233 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 DUTP33316 252 aaKnown RBP8.29□□□□□ -1.08
VPS11-207ENST00000620429 HOXA4Q00056 320 aaPredicted RBP8.29□□□□□ -1.08
VPS11-207ENST00000620429 ALKBH6Q3KRA9 238 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 CXorf67Q86X51 503 aaPredicted RBP8.29□□□□□ -1.08
VPS11-207ENST00000620429 TMEM158Q8WZ71 300 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 MLST8Q9BVC4 326 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 FAM234AQ9H0X4 552 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 ZMAT4Q9H898 229 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 TRGV8A0A0C4DH27 118 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 SNCGO76070 127 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 MYOD1P15172 320 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 PLGLB1Q02325 96 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 ZNF329Q86UD4 541 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 SBSPONQ8IVN8 264 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 IFI27L1Q96BM0 104 aa8.29□□□□□ -1.08
VPS11-207ENST00000620429 TET2Q6N021 2002 aaPredicted RBP8.28□□□□□ -1.08
VPS11-207ENST00000620429 ZNF826PQ6ZT77 177 aa8.28□□□□□ -1.08
VPS11-207ENST00000620429 MOB3BQ86TA1 216 aa8.28□□□□□ -1.08
VPS11-207ENST00000620429 RASL10AQ92737 203 aa8.28□□□□□ -1.08
VPS11-207ENST00000620429 FBXL15Q9H469 300 aa8.28□□□□□ -1.08
VPS11-207ENST00000620429 HHLA3Q9XRX5 114 aa8.28□□□□□ -1.08
VPS11-207ENST00000620429 P01737 135 aa8.28□□□□□ -1.08
VPS11-207ENST00000620429 HBDP02042 147 aa8.28□□□□□ -1.08
VPS11-207ENST00000620429 FOXF2Q12947 444 aa8.28□□□□□ -1.08
VPS11-207ENST00000620429 VKORC1L1Q8N0U8 176 aa8.28□□□□□ -1.08
VPS11-207ENST00000620429 FAM169BQ8N8A8 192 aa8.28□□□□□ -1.08
VPS11-207ENST00000620429 KLF12Q9Y4X4 402 aa8.28□□□□□ -1.08
VPS11-207ENST00000620429 BAHCC1Q9P281 2608 aa8.28□□□□□ -1.08
VPS11-207ENST00000620429 TMEM213A2RRL7 107 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 FAM106CPP0CH98 169 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 TNFRSF1AP19438 455 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 IFI27P40305 119 aaPredicted RBP8.27□□□□□ -1.09
VPS11-207ENST00000620429 PAX8Q06710 450 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 LOXL1Q08397 574 aaPredicted RBP8.27□□□□□ -1.09
VPS11-207ENST00000620429 LY6DQ14210 128 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 TBC1D28Q2M2D7 210 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 FAM106AQ4KMX7 169 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 MORN3Q6PF18 240 aaPredicted RBP8.27□□□□□ -1.09
VPS11-207ENST00000620429 PPP1R27Q86WC6 154 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 NBEAQ8NFP9 2946 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 FAM167A-AS1Q96KT0 104 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 DEFB127Q9H1M4 99 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 CACNA1GO43497 2377 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 LINC01619G3V211 115 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 K7EMI3 77 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 OVOL3O00110 214 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 CEACAM4O75871 244 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 MOSP00540 346 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 UBE2L3P68036 154 aaKnown RBP8.27□□□□□ -1.09
VPS11-207ENST00000620429 ZNF766Q5HY98 468 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 KLF17Q5JT82 389 aaPredicted RBP8.27□□□□□ -1.09
VPS11-207ENST00000620429 LINC00322Q6ZN03 302 aaPredicted RBP8.27□□□□□ -1.09
VPS11-207ENST00000620429 OR13A1Q8NGR1 328 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 DKK2Q9UBU2 259 aa8.27□□□□□ -1.09
VPS11-207ENST00000620429 KLF13Q9Y2Y9 288 aaPredicted RBP8.27□□□□□ -1.09
VPS11-207ENST00000620429 CHD8Q9HCK8 2581 aa8.26□□□□□ -1.09
VPS11-207ENST00000620429 TRAV4A0A0B4J268 109 aa8.26□□□□□ -1.09
VPS11-207ENST00000620429 ERVK-16P61578 105 aa8.26□□□□□ -1.09
VPS11-207ENST00000620429 POU2AF1Q16633 256 aa8.26□□□□□ -1.09
VPS11-207ENST00000620429 RASL11BQ9BPW5 248 aa8.26□□□□□ -1.09
VPS11-207ENST00000620429 DCTN5Q9BTE1 182 aa8.26□□□□□ -1.09
VPS11-207ENST00000620429 OBP2BQ9NPH6 170 aa8.26□□□□□ -1.09
VPS11-207ENST00000620429 TRAV3A0A0B4J244 114 aa8.26□□□□□ -1.09
VPS11-207ENST00000620429 WI2-2373I1.2A0A1W2PRP0 233 aa8.26□□□□□ -1.09
VPS11-207ENST00000620429 SP1P08047 785 aa8.26□□□□□ -1.09
VPS11-207ENST00000620429 RBMXL3Q8N7X1 1067 aaKnown RBP8.26□□□□□ -1.09
VPS11-207ENST00000620429 SLC25A2Q9BXI2 301 aa8.26□□□□□ -1.09
VPS11-207ENST00000620429 TTTY13Q9BZ97 58 aa8.26□□□□□ -1.09
VPS11-207ENST00000620429 RAXQ9Y2V3 346 aa8.26□□□□□ -1.09
VPS11-207ENST00000620429 SIGLEC9Q9Y336 463 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms