RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 IGLC2P0DOY2 106 aa6.07□□□□□ -1.44
CPNE3-209ENST00000620393 GP9P14770 177 aa6.07□□□□□ -1.44
CPNE3-209ENST00000620393 PPT1P50897 306 aa6.07□□□□□ -1.44
CPNE3-209ENST00000620393 RIPPLY3P57055 190 aa6.07□□□□□ -1.44
CPNE3-209ENST00000620393 DEFB114Q30KQ6 69 aa6.07□□□□□ -1.44
CPNE3-209ENST00000620393 FAM90A2PQ658T7 463 aa6.07□□□□□ -1.44
CPNE3-209ENST00000620393 SIGLEC15Q6ZMC9 328 aa6.07□□□□□ -1.44
CPNE3-209ENST00000620393 TCF24Q7RTU0 167 aa6.07□□□□□ -1.44
CPNE3-209ENST00000620393 IQCF2Q8IXL9 164 aa6.07□□□□□ -1.44
CPNE3-209ENST00000620393 C17orf77Q96MU5 243 aa6.07□□□□□ -1.44
CPNE3-209ENST00000620393 MED9Q9NWA0 146 aa6.07□□□□□ -1.44
CPNE3-209ENST00000620393 ZNF586Q9NXT0 402 aa6.07□□□□□ -1.44
CPNE3-209ENST00000620393 TRBV19A0A075B6N1 114 aa6.06□□□□□ -1.44
CPNE3-209ENST00000620393 A0A087X0K7 114 aa6.06□□□□□ -1.44
CPNE3-209ENST00000620393 LINC00862A6NCI5 91 aa6.06□□□□□ -1.44
CPNE3-209ENST00000620393 SNRPCP09234 159 aaKnown RBP6.06□□□□□ -1.44
CPNE3-209ENST00000620393 ATF4P18848 351 aaPredicted RBP6.06□□□□□ -1.44
CPNE3-209ENST00000620393 TAGLN2P37802 199 aaKnown RBP6.06□□□□□ -1.44
CPNE3-209ENST00000620393 MEOX2P50222 304 aa6.06□□□□□ -1.44
CPNE3-209ENST00000620393 UBE2L3P68036 154 aaKnown RBP6.06□□□□□ -1.44
CPNE3-209ENST00000620393 GUK1Q16774 197 aa6.06□□□□□ -1.44
CPNE3-209ENST00000620393 MLXQ9UH92 298 aa6.06□□□□□ -1.44
CPNE3-209ENST00000620393 A0A1W2PRE2 83 aa6.05□□□□□ -1.44
CPNE3-209ENST00000620393 RBFOX3A6NFN3 312 aa6.05□□□□□ -1.44
CPNE3-209ENST00000620393 PAGE4O60829 102 aa6.05□□□□□ -1.44
CPNE3-209ENST00000620393 NDUFB4O95168 129 aa6.05□□□□□ -1.44
CPNE3-209ENST00000620393 IFNA1P01562 189 aa6.05□□□□□ -1.44
CPNE3-209ENST00000620393 RANP62826 216 aaKnown RBP6.05□□□□□ -1.44
CPNE3-209ENST00000620393 RPL11P62913 178 aaKnown RBP6.05□□□□□ -1.44
CPNE3-209ENST00000620393 PDE6HQ13956 83 aa6.05□□□□□ -1.44
CPNE3-209ENST00000620393 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.05□□□□□ -1.44
CPNE3-209ENST00000620393 LYPD1Q8N2G4 141 aa6.05□□□□□ -1.44
CPNE3-209ENST00000620393 BLNKQ8WV28 456 aa6.05□□□□□ -1.44
CPNE3-209ENST00000620393 FAM210AQ96ND0 272 aa6.05□□□□□ -1.44
CPNE3-209ENST00000620393 NKX6-2Q9C056 277 aaPredicted RBP6.05□□□□□ -1.44
CPNE3-209ENST00000620393 MANBALQ9NQG1 85 aa6.05□□□□□ -1.44
CPNE3-209ENST00000620393 GNG13Q9P2W3 67 aa6.05□□□□□ -1.44
CPNE3-209ENST00000620393 ARL2-SNX15V9GYD0 113 aa6.05□□□□□ -1.44
CPNE3-209ENST00000620393 TRAV25A0A0B4J276 109 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 RAB19A4D1S5 217 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 PGPA6NDG6 321 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 FAM74A7A6NL05 159 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 H3BTX0 84 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 TSPAN4O14817 238 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 ZNF253O75346 499 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 SAP30O75446 220 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 INSL3P51460 131 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 UBE2G2P60604 165 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 SUMO1P63165 101 aaKnown RBP6.04□□□□□ -1.44
CPNE3-209ENST00000620393 PAFAH1B2P68402 229 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 PSG9Q00887 426 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 HAGHQ16775 308 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 ZNF506Q5JVG8 444 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 RBPMS2Q6ZRY4 209 aaKnown RBP6.04□□□□□ -1.44
CPNE3-209ENST00000620393 DYNLRB2Q8TF09 96 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 RARRES2Q99969 163 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 TXNDC17Q9BRA2 123 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 MCRIP2Q9BUT9 160 aaKnown RBP6.04□□□□□ -1.44
CPNE3-209ENST00000620393 SSBP4Q9BWG4 385 aaPredicted RBP6.04□□□□□ -1.44
CPNE3-209ENST00000620393 MS4A6AQ9H2W1 248 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 SMDT1Q9H4I9 107 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 NRN1Q9NPD7 142 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 CLEC5AQ9NY25 188 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 VAX2Q9UIW0 290 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 YTHDF2Q9Y5A9 579 aaKnown RBP6.04□□□□□ -1.44
CPNE3-209ENST00000620393 SELENOKQ9Y6D0 94 aa6.04□□□□□ -1.44
CPNE3-209ENST00000620393 WNK1Q9H4A3 2382 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 COL6A5A8TX70 2615 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 IGKV3-7A0A075B6H7 116 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 TRAV2A0A0B4J234 112 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 TRAV8-2A0A0B4J237 113 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 LOC102723971A0A1B0GUV8 181 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 DNASE2O00115 360 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-209ENST00000620393 SLC17A3O00476 420 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 SOCS3O14543 225 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 NDUFS6O75380 124 aaKnown RBP6.03□□□□□ -1.44
CPNE3-209ENST00000620393 IGLV1-51P01701 117 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 BCL2P10415 239 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 ICAM4Q14773 271 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 PEA15Q15121 130 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 NDUFA5Q16718 116 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 KRTAP21-3Q3LHN1 58 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 CD300EQ496F6 205 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-209ENST00000620393 C9orf66Q5T8R8 295 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 SAMD13Q5VXD3 122 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 CST9LP1Q5W188 147 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 WFDC3Q8IUB2 231 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 CCDC28AQ8IWP9 274 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 TMEM61Q8N0U2 210 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 GBGT1Q8N5D6 347 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 EIF4E3Q8N5X7 224 aaKnown RBP6.03□□□□□ -1.44
CPNE3-209ENST00000620393 OR2K2Q8NGT1 345 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 SPATA3Q8NHX4 192 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 DCANP1Q8TF63 244 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 C16orf92Q96LL3 132 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 SLC50A1Q9BRV3 221 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 EIF5A2Q9GZV4 153 aaKnown RBP6.03□□□□□ -1.44
CPNE3-209ENST00000620393 Q9H3A6 140 aa6.03□□□□□ -1.44
CPNE3-209ENST00000620393 ZNF331Q9NQX6 463 aaPredicted RBP6.03□□□□□ -1.44
CPNE3-209ENST00000620393 OTORQ9NRC9 128 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms