RNA–Protein interactions for RNA: ENST00000619747.1

LAPTM4B-204, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 2,758 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-204ENST00000619747 MT-ND6P03923 174 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 UBE2L3P68036 154 aaKnown RBP15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 FXYD3Q14802 87 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 UFSP1Q6NVU6 142 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 C18orf32Q8TCD1 76 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 EPG5Q9HCE0 2579 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 PRTN3P24158 256 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 ATP6V0BQ99437 205 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 SLC25A2Q9BXI2 301 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 BPESC1Q9GZL8 116 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 PSMB11A5LHX3 300 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 H3BTX0 84 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 CEACAM3P40198 252 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 TAS2R45P59539 299 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 PQLC2Q6ZP29 291 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 LINC00305Q7Z4B0 112 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 FAM167A-AS1Q96KT0 104 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 LINC00479Q96M42 142 aa15.36■□□□□ 0.05
LAPTM4B-204ENST00000619747 NCBP2LA6PVI3 153 aaKnown RBP15.35■□□□□ 0.05
LAPTM4B-204ENST00000619747 CX3CL1P78423 397 aa15.35■□□□□ 0.05
LAPTM4B-204ENST00000619747 OR11H6Q8NGC7 330 aa15.35■□□□□ 0.05
LAPTM4B-204ENST00000619747 TMEM167BQ9NRX6 74 aa15.35■□□□□ 0.05
LAPTM4B-204ENST00000619747 THYN1Q9P016 225 aa15.35■□□□□ 0.05
LAPTM4B-204ENST00000619747 TRAV26-1A0A087WT03 109 aa15.35■□□□□ 0.05
LAPTM4B-204ENST00000619747 RAB9AP51151 201 aa15.35■□□□□ 0.05
LAPTM4B-204ENST00000619747 FOXE3Q13461 319 aa15.35■□□□□ 0.05
LAPTM4B-204ENST00000619747 NHLRC2Q8NBF2 726 aa15.34■□□□□ 0.05
LAPTM4B-204ENST00000619747 STXBP6Q8NFX7 210 aa15.34■□□□□ 0.05
LAPTM4B-204ENST00000619747 EAF1Q96JC9 268 aaPredicted RBP15.34■□□□□ 0.05
LAPTM4B-204ENST00000619747 RNASE7Q9H1E1 156 aaKnown RBP15.34■□□□□ 0.05
LAPTM4B-204ENST00000619747 SLAQ13239 276 aa15.34■□□□□ 0.05
LAPTM4B-204ENST00000619747 RNASEKQ6P5S7 137 aaKnown RBP15.34■□□□□ 0.05
LAPTM4B-204ENST00000619747 GTF2H5Q6ZYL4 71 aa15.34■□□□□ 0.05
LAPTM4B-204ENST00000619747 BLNKQ8WV28 456 aa15.34■□□□□ 0.05
LAPTM4B-204ENST00000619747 CFHR4Q92496 578 aa15.34■□□□□ 0.05
LAPTM4B-204ENST00000619747 ST20Q9HBF5 79 aa15.34■□□□□ 0.05
LAPTM4B-204ENST00000619747 F11RQ9Y624 299 aaKnown RBP15.34■□□□□ 0.05
LAPTM4B-204ENST00000619747 USP9YO00507 2555 aaPredicted RBP15.34■□□□□ 0.05
LAPTM4B-204ENST00000619747 HELTA6NFD8 242 aa15.33■□□□□ 0.04
LAPTM4B-204ENST00000619747 APCSP02743 223 aa15.33■□□□□ 0.04
LAPTM4B-204ENST00000619747 PRB4P10163 310 aaPredicted RBP15.33■□□□□ 0.04
LAPTM4B-204ENST00000619747 NEGR1Q7Z3B1 354 aa15.33■□□□□ 0.04
LAPTM4B-204ENST00000619747 CRYBA4P53673 196 aa15.33■□□□□ 0.04
LAPTM4B-204ENST00000619747 SGK494Q96LW2 274 aa15.33■□□□□ 0.04
LAPTM4B-204ENST00000619747 JMJD8Q96S16 334 aa15.33■□□□□ 0.04
LAPTM4B-204ENST00000619747 TXNDC17Q9BRA2 123 aa15.33■□□□□ 0.04
LAPTM4B-204ENST00000619747 NBR2O15453 112 aa15.32■□□□□ 0.04
LAPTM4B-204ENST00000619747 SNAI2O43623 268 aa15.32■□□□□ 0.04
LAPTM4B-204ENST00000619747 M0R1W7 72 aa15.32■□□□□ 0.04
LAPTM4B-204ENST00000619747 EFNA4P52798 201 aa15.32■□□□□ 0.04
LAPTM4B-204ENST00000619747 PLP1P60201 277 aa15.32■□□□□ 0.04
LAPTM4B-204ENST00000619747 PAXXQ9BUH6 204 aa15.32■□□□□ 0.04
LAPTM4B-204ENST00000619747 SH2D7A6NKC9 451 aaPredicted RBP15.31■□□□□ 0.04
LAPTM4B-204ENST00000619747 MGST1P10620 155 aaKnown RBP15.31■□□□□ 0.04
LAPTM4B-204ENST00000619747 CENPWQ5EE01 88 aa15.31■□□□□ 0.04
LAPTM4B-204ENST00000619747 THAP8Q8NA92 274 aa15.31■□□□□ 0.04
LAPTM4B-204ENST00000619747 TMEM70Q9BUB7 260 aa15.31■□□□□ 0.04
LAPTM4B-204ENST00000619747 PRR31Q5SQ13 230 aa15.31■□□□□ 0.04
LAPTM4B-204ENST00000619747 CSPG4Q6UVK1 2322 aa15.31■□□□□ 0.04
LAPTM4B-204ENST00000619747 AP1S3Q96PC3 154 aa15.31■□□□□ 0.04
LAPTM4B-204ENST00000619747 MCRIP2Q9BUT9 160 aaKnown RBP15.31■□□□□ 0.04
LAPTM4B-204ENST00000619747 C19orf24Q9BVV8 132 aa15.31■□□□□ 0.04
LAPTM4B-204ENST00000619747 H3BUT2 72 aa15.3■□□□□ 0.04
LAPTM4B-204ENST00000619747 AMY1AP04745 511 aa15.3■□□□□ 0.04
LAPTM4B-204ENST00000619747 CRYGCP07315 174 aa15.3■□□□□ 0.04
LAPTM4B-204ENST00000619747 SIGMAR1Q99720 223 aa15.3■□□□□ 0.04
LAPTM4B-204ENST00000619747 A6NJY4 79 aa15.3■□□□□ 0.04
LAPTM4B-204ENST00000619747 ODF3BA8MYP8 253 aa15.3■□□□□ 0.04
LAPTM4B-204ENST00000619747 HLA-DQA1P01909 254 aa15.3■□□□□ 0.04
LAPTM4B-204ENST00000619747 GNG4P50150 75 aa15.3■□□□□ 0.04
LAPTM4B-204ENST00000619747 LYZP61626 148 aa15.3■□□□□ 0.04
LAPTM4B-204ENST00000619747 RPL24P83731 157 aaKnown RBP15.3■□□□□ 0.04
LAPTM4B-204ENST00000619747 LINC00173Q6ZV60 143 aa15.3■□□□□ 0.04
LAPTM4B-204ENST00000619747 TMEM116Q8NCL8 245 aa15.3■□□□□ 0.04
LAPTM4B-204ENST00000619747 OR1L4Q8NGR5 311 aa15.3■□□□□ 0.04
LAPTM4B-204ENST00000619747 HOXB4P17483 251 aaPredicted RBP15.29■□□□□ 0.04
LAPTM4B-204ENST00000619747 MRPL32Q9BYC8 188 aaKnown RBP15.29■□□□□ 0.04
LAPTM4B-204ENST00000619747 ABCA2Q9BZC7 2435 aa15.28■□□□□ 0.04
LAPTM4B-204ENST00000619747 IGHV3OR16-10A0A075B7F0 116 aa15.28■□□□□ 0.04
LAPTM4B-204ENST00000619747 CA1P00915 261 aaPredicted RBP15.28■□□□□ 0.04
LAPTM4B-204ENST00000619747 GPR183P32249 361 aa15.28■□□□□ 0.04
LAPTM4B-204ENST00000619747 TIGITQ495A1 244 aa15.28■□□□□ 0.04
LAPTM4B-204ENST00000619747 C11orf52Q96A22 123 aa15.28■□□□□ 0.04
LAPTM4B-204ENST00000619747 SCGB1A1P11684 91 aa15.28■□□□□ 0.04
LAPTM4B-204ENST00000619747 CKS1BP61024 79 aa15.28■□□□□ 0.04
LAPTM4B-204ENST00000619747 GNG5P63218 68 aa15.28■□□□□ 0.04
LAPTM4B-204ENST00000619747 HIST1H1AQ02539 215 aaPredicted RBP15.28■□□□□ 0.04
LAPTM4B-204ENST00000619747 ZNF48Q96MX3 618 aaPredicted RBP15.28■□□□□ 0.04
LAPTM4B-204ENST00000619747 PRB1P04280 392 aa15.27■□□□□ 0.04
LAPTM4B-204ENST00000619747 PERPQ96FX8 193 aa15.27■□□□□ 0.04
LAPTM4B-204ENST00000619747 SCRT2Q9NQ03 307 aa15.27■□□□□ 0.04
LAPTM4B-204ENST00000619747 SERTAD4Q9NUC0 356 aa15.27■□□□□ 0.04
LAPTM4B-204ENST00000619747 K7EP34 96 aa15.27■□□□□ 0.03
LAPTM4B-204ENST00000619747 NDPQ00604 133 aa15.27■□□□□ 0.03
LAPTM4B-204ENST00000619747 C5orf64Q2M2E5 130 aa15.27■□□□□ 0.03
LAPTM4B-204ENST00000619747 FAM120AOSQ5T036 256 aa15.27■□□□□ 0.03
LAPTM4B-204ENST00000619747 NPFFR1Q9GZQ6 430 aa15.27■□□□□ 0.03
LAPTM4B-204ENST00000619747 A0A1W2PRE2 83 aa15.26■□□□□ 0.03
LAPTM4B-204ENST00000619747 I3L2K1 104 aa15.26■□□□□ 0.03
LAPTM4B-204ENST00000619747 ZNF207O43670 478 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms