RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 C2orf70A6NJV1 201 aa6.96□□□□□ -1.3
SYN3-213ENST00000619146 HMGB3O15347 200 aaKnown RBP6.96□□□□□ -1.3
SYN3-213ENST00000619146 ZNF207O43670 478 aaKnown RBP6.96□□□□□ -1.3
SYN3-213ENST00000619146 ARL14EPLP0DKL9 152 aa6.96□□□□□ -1.3
SYN3-213ENST00000619146 GCHFRP30047 84 aa6.96□□□□□ -1.3
SYN3-213ENST00000619146 GALR1P47211 349 aa6.96□□□□□ -1.3
SYN3-213ENST00000619146 MEOX2P50222 304 aa6.96□□□□□ -1.3
SYN3-213ENST00000619146 PMS2P11Q13670 270 aa6.96□□□□□ -1.3
SYN3-213ENST00000619146 TM4SF20Q53R12 229 aa6.96□□□□□ -1.3
SYN3-213ENST00000619146 MORN5Q5VZ52 161 aa6.96□□□□□ -1.3
SYN3-213ENST00000619146 SPATA31B1PQ5VZV4 182 aa6.96□□□□□ -1.3
SYN3-213ENST00000619146 IL34Q6ZMJ4 242 aa6.96□□□□□ -1.3
SYN3-213ENST00000619146 DLX4Q92988 240 aaPredicted RBP6.96□□□□□ -1.3
SYN3-213ENST00000619146 PAXXQ9BUH6 204 aa6.96□□□□□ -1.3
SYN3-213ENST00000619146 RHPN1-AS1Q9BWJ2 59 aa6.96□□□□□ -1.3
SYN3-213ENST00000619146 OR51M1Q9H341 326 aa6.96□□□□□ -1.3
SYN3-213ENST00000619146 ALMS1Q8TCU4 4167 aa6.96□□□□□ -1.3
SYN3-213ENST00000619146 TRAV5A0A0B4J249 113 aa6.95□□□□□ -1.3
SYN3-213ENST00000619146 OVOL1O14753 267 aa6.95□□□□□ -1.3
SYN3-213ENST00000619146 CHEK1O14757 476 aa6.95□□□□□ -1.3
SYN3-213ENST00000619146 IFNA1P01562 189 aa6.95□□□□□ -1.3
SYN3-213ENST00000619146 HIST1H1EP10412 219 aaKnown RBP6.95□□□□□ -1.3
SYN3-213ENST00000619146 FOLR2P14207 255 aa6.95□□□□□ -1.3
SYN3-213ENST00000619146 CBLN1P23435 193 aa6.95□□□□□ -1.3
SYN3-213ENST00000619146 UBE2L3P68036 154 aaKnown RBP6.95□□□□□ -1.3
SYN3-213ENST00000619146 GUK1Q16774 197 aa6.95□□□□□ -1.3
SYN3-213ENST00000619146 SAMD13Q5VXD3 122 aa6.95□□□□□ -1.3
SYN3-213ENST00000619146 LEMD1Q68G75 181 aa6.95□□□□□ -1.3
SYN3-213ENST00000619146 C16orf54Q6UWD8 224 aa6.95□□□□□ -1.3
SYN3-213ENST00000619146 SSX7Q7RTT5 188 aa6.95□□□□□ -1.3
SYN3-213ENST00000619146 IQCF2Q8IXL9 164 aa6.95□□□□□ -1.3
SYN3-213ENST00000619146 EDA2RQ9HAV5 297 aa6.95□□□□□ -1.3
SYN3-213ENST00000619146 MANBALQ9NQG1 85 aa6.95□□□□□ -1.3
SYN3-213ENST00000619146 SIGLEC8Q9NYZ4 499 aa6.95□□□□□ -1.3
SYN3-213ENST00000619146 IGHV3-49A0A0A0MS15 119 aa6.94□□□□□ -1.3
SYN3-213ENST00000619146 RBMY1BA6NDE4 496 aaKnown RBP6.94□□□□□ -1.3
SYN3-213ENST00000619146 RBMY1EA6NEQ0 496 aaKnown RBP6.94□□□□□ -1.3
SYN3-213ENST00000619146 ZNF785A8K8V0 405 aa6.94□□□□□ -1.3
SYN3-213ENST00000619146 SAP30O75446 220 aa6.94□□□□□ -1.3
SYN3-213ENST00000619146 APOHP02749 345 aaPredicted RBP6.94□□□□□ -1.3
SYN3-213ENST00000619146 OR10J4P0C629 311 aa6.94□□□□□ -1.3
SYN3-213ENST00000619146 NBEAP1P0C6P0 100 aa6.94□□□□□ -1.3
SYN3-213ENST00000619146 RBMY1DP0C7P1 496 aaKnown RBP6.94□□□□□ -1.3
SYN3-213ENST00000619146 IGLC2P0DOY2 106 aa6.94□□□□□ -1.3
SYN3-213ENST00000619146 GP9P14770 177 aa6.94□□□□□ -1.3
SYN3-213ENST00000619146 ATF4P18848 351 aaPredicted RBP6.94□□□□□ -1.3
SYN3-213ENST00000619146 FGF8P55075 233 aaPredicted RBP6.94□□□□□ -1.3
SYN3-213ENST00000619146 NDUFA5Q16718 116 aa6.94□□□□□ -1.3
SYN3-213ENST00000619146 SUN5Q8TC36 379 aa6.94□□□□□ -1.3
SYN3-213ENST00000619146 GLMPQ8WWB7 406 aa6.94□□□□□ -1.3
SYN3-213ENST00000619146 FXYD5Q96DB9 178 aa6.94□□□□□ -1.3
SYN3-213ENST00000619146 MED9Q9NWA0 146 aa6.94□□□□□ -1.3
SYN3-213ENST00000619146 GNG13Q9P2W3 67 aa6.94□□□□□ -1.3
SYN3-213ENST00000619146 ARL2-SNX15V9GYD0 113 aa6.94□□□□□ -1.3
SYN3-213ENST00000619146 IGHV3OR16-13A0A075B7E8 117 aa6.93□□□□□ -1.3
SYN3-213ENST00000619146 IGHV3-74A0A0B4J1X5 117 aa6.93□□□□□ -1.3
SYN3-213ENST00000619146 IGHV3-66A0A0C4DH42 116 aa6.93□□□□□ -1.3
SYN3-213ENST00000619146 A0A1B0GV50 99 aa6.93□□□□□ -1.3
SYN3-213ENST00000619146 LINC00862A6NCI5 91 aa6.93□□□□□ -1.3
SYN3-213ENST00000619146 EIF3GO75821 320 aaKnown RBP eCLIP6.93□□□□□ -1.3
SYN3-213ENST00000619146 CSN3P07498 182 aa6.93□□□□□ -1.3
SYN3-213ENST00000619146 PDE6HQ13956 83 aa6.93□□□□□ -1.3
SYN3-213ENST00000619146 SIGLEC15Q6ZMC9 328 aa6.93□□□□□ -1.3
SYN3-213ENST00000619146 DYNLRB2Q8TF09 96 aa6.93□□□□□ -1.3
SYN3-213ENST00000619146 PCNPQ8WW12 178 aaKnown RBP6.93□□□□□ -1.3
SYN3-213ENST00000619146 ZNF503Q96F45 646 aa6.93□□□□□ -1.3
SYN3-213ENST00000619146 NKX6-2Q9C056 277 aaPredicted RBP6.93□□□□□ -1.3
SYN3-213ENST00000619146 RETNQ9HD89 108 aa6.93□□□□□ -1.3
SYN3-213ENST00000619146 TRBV19A0A075B6N1 114 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 A0A087X0K7 114 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 A0A1W2PRE2 83 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 RAB19A4D1S5 217 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 MRPS12O15235 138 aaKnown RBP6.92□□□□□ -1.3
SYN3-213ENST00000619146 ZNF253O75346 499 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 PYYP10082 97 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 BCL2P10415 239 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 RPL11P62913 178 aaKnown RBP6.92□□□□□ -1.3
SYN3-213ENST00000619146 CCL20P78556 96 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 PEA15Q15121 130 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 TCF24Q7RTU0 167 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 LYPD1Q8N2G4 141 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 FAM110AQ9BQ89 295 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 TXNDC17Q9BRA2 123 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 TM2D3Q9BRN9 247 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 TMPRSS5Q9H3S3 457 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 SMDT1Q9H4I9 107 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 CLEC5AQ9NY25 188 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 VAX2Q9UIW0 290 aa6.92□□□□□ -1.3
SYN3-213ENST00000619146 PCLOQ9Y6V0 5065 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 TRAV25A0A0B4J276 109 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 RBFOX3A6NFN3 312 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 H3BQ15 152 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 PAGE4O60829 102 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 NDUFS6O75380 124 aaKnown RBP6.91□□□□□ -1.3
SYN3-213ENST00000619146 IGHV4-30-4P0DP06 118 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 INSL3P51460 131 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 PAFAH1B2P68402 229 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 PSG9Q00887 426 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 DEFB114Q30KQ6 69 aa6.91□□□□□ -1.3
SYN3-213ENST00000619146 CST9LP1Q5W188 147 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms