RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 TTRP02766 147 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 PDE6HQ13956 83 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 C1orf194Q5T5A4 169 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 TIMM17AQ99595 171 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 TMEM243Q9BU79 118 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 K7EM74 188 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 GOLT1AQ6ZVE7 132 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 PCP4P48539 62 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 LAIR2Q6ISS4 152 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 CTHRC1Q96CG8 243 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 A0A1B0GTL3 188 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 HRKO00198 91 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 ZNF114Q8NC26 417 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 C5orf30Q96GV9 206 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 TMSB15BA0A087X1C1 80 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 SRRM4A7MD48 611 aaKnown RBP2.68□□□□□ -1.98
LPP-220ENST00000617246 LINC00473A8K010 186 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 NDUFA1O15239 70 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 SPSB4Q96A44 273 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 ADAMTSL5Q6ZMM2 481 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 NCOR1P1Q9H4R4 102 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 SFT2D2O95562 160 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 CRYGDP07320 174 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 DIAPH2-AS1Q14236 149 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 MRGPRG-AS1Q2M3A8 158 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 FER1L6-AS1Q8NA97 138 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 LEAP2Q969E1 77 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 FAM110AQ9BQ89 295 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 TRBV20-1A0A075B6N2 111 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 K7EQD1 137 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 SNRPBP14678 240 aaKnown RBP2.68□□□□□ -1.98
LPP-220ENST00000617246 ERVS71-1P61550 626 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 MORN2Q502X0 79 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 TMEM170BQ5T4T1 132 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 VCX2Q9H322 139 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 HLA-DQB1P01920 261 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 RIMKLAQ8IXN7 391 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 Q8N976 141 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 NRGNQ92686 78 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 NEUROG1Q92886 237 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 JKAMPQ9P055 326 aa2.68□□□□□ -1.98
LPP-220ENST00000617246 IGHV1OR15-1A0A075B7D0 117 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 FGF23Q9GZV9 251 aaPredicted RBP2.67□□□□□ -1.98
LPP-220ENST00000617246 NAT8BQ9UHF3 227 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 KCNE5Q9UJ90 142 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 TRAPPC1Q9Y5R8 145 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 DSCAML1Q8TD84 2053 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 TMEM263Q8WUH6 116 aaKnown RBP2.67□□□□□ -1.98
LPP-220ENST00000617246 IGHV3OR16-13A0A075B7E8 117 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 IGHV3-74A0A0B4J1X5 117 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 SNRPNP63162 240 aaKnown RBP2.67□□□□□ -1.98
LPP-220ENST00000617246 LINC00311Q8N616 119 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 HDHD3Q9BSH5 251 aaPredicted RBP2.67□□□□□ -1.98
LPP-220ENST00000617246 PNRC2Q9NPJ4 139 aaKnown RBP2.67□□□□□ -1.98
LPP-220ENST00000617246 IGHV3-35A0A0C4DH35 117 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 ITGB1BP1O14713 200 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 CTSGP08311 255 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 ZNF138P52744 262 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 SUMO1P63165 101 aaKnown RBP2.67□□□□□ -1.98
LPP-220ENST00000617246 LINC01551Q86U37 167 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 OR10AG1Q8NH19 301 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 ANAPC13Q9BS18 74 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 MRPL13Q9BYD1 178 aaKnown RBP2.67□□□□□ -1.98
LPP-220ENST00000617246 PRSS29PA6NIE9 313 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 TVP23CQ96ET8 276 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 CYTL1Q9NRR1 136 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 CLDN34H7C241 214 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 ZNF25P17030 456 aaPredicted RBP2.67□□□□□ -1.98
LPP-220ENST00000617246 FHITP49789 147 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 F2Z2F3 143 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 IGF1P05019 195 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 P0C879 139 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 OTORQ9NRC9 128 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 LHFPL6Q9Y693 200 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 ZAR1LA6NP61 321 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 SRSF1Q07955 248 aaKnown RBP eCLIP2.67□□□□□ -1.98
LPP-220ENST00000617246 LINC00299Q6ZSB3 139 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 DYNAPQ8N1N2 210 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 SMDT1Q9H4I9 107 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 TAL2Q16559 108 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 ZNF562Q6V9R5 426 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 XCL2Q9UBD3 114 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 TMEM50BP56557 158 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 MESP1Q9BRJ9 268 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 S4R3C0 116 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 IGKV1D-42A0A075B6H8 117 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 A0A0J9YY99 117 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 GAGE10A6NGK3 116 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 IGLV2-23P01705 113 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 SEC61GP60059 68 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 LY6G6FQ5SQ64 297 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 VKORC1L1Q8N0U8 176 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 RBM38Q9H0Z9 239 aaKnown RBP2.67□□□□□ -1.98
LPP-220ENST00000617246 MS4A6AQ9H2W1 248 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 LAGE3Q14657 143 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 MUC21Q5SSG8 566 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 LYPD1Q8N2G4 141 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 GATD1Q8NB37 220 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 IGHV7-4-1A0A0J9YVY3 117 aa2.67□□□□□ -1.98
LPP-220ENST00000617246 PINLYPA6NC86 204 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms