RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 NOTCH1P46531 2555 aa11.65□□□□□ -0.55
PCDHGC3-204ENST00000617222 CTXND1A0A1B0GTU2 59 aa11.64□□□□□ -0.55
PCDHGC3-204ENST00000617222 SOCS3O14543 225 aa11.64□□□□□ -0.55
PCDHGC3-204ENST00000617222 ZNF688P0C7X2 276 aa11.64□□□□□ -0.55
PCDHGC3-204ENST00000617222 STAG3L2P0CL84 134 aa11.64□□□□□ -0.55
PCDHGC3-204ENST00000617222 STAG3L3P0CL85 134 aa11.64□□□□□ -0.55
PCDHGC3-204ENST00000617222 CMC4P56277 68 aaPredicted RBP11.64□□□□□ -0.55
PCDHGC3-204ENST00000617222 DEFB131AP59861 70 aa11.64□□□□□ -0.55
PCDHGC3-204ENST00000617222 IGFL4Q6B9Z1 124 aa11.64□□□□□ -0.55
PCDHGC3-204ENST00000617222 FAM213BQ8TBF2 198 aa11.64□□□□□ -0.55
PCDHGC3-204ENST00000617222 BLNKQ8WV28 456 aa11.64□□□□□ -0.55
PCDHGC3-204ENST00000617222 FXYD5Q96DB9 178 aa11.64□□□□□ -0.55
PCDHGC3-204ENST00000617222 LINC00052Q96N35 136 aa11.64□□□□□ -0.55
PCDHGC3-204ENST00000617222 C19orf73Q9NVV2 129 aa11.64□□□□□ -0.55
PCDHGC3-204ENST00000617222 TRAV8-2A0A0B4J237 113 aa11.63□□□□□ -0.55
PCDHGC3-204ENST00000617222 OR11H12B2RN74 326 aa11.63□□□□□ -0.55
PCDHGC3-204ENST00000617222 NBEAP1P0C6P0 100 aa11.63□□□□□ -0.55
PCDHGC3-204ENST00000617222 SNRPD3P62318 126 aaKnown RBP11.63□□□□□ -0.55
PCDHGC3-204ENST00000617222 GUK1Q16774 197 aa11.63□□□□□ -0.55
PCDHGC3-204ENST00000617222 ODF3L2Q3SX64 289 aa11.63□□□□□ -0.55
PCDHGC3-204ENST00000617222 SAMD13Q5VXD3 122 aa11.63□□□□□ -0.55
PCDHGC3-204ENST00000617222 LCN15Q6UWW0 184 aa11.63□□□□□ -0.55
PCDHGC3-204ENST00000617222 PQLC2Q6ZP29 291 aa11.63□□□□□ -0.55
PCDHGC3-204ENST00000617222 WFDC10AQ9H1F0 79 aa11.63□□□□□ -0.55
PCDHGC3-204ENST00000617222 MAP6D1Q9H9H5 199 aa11.63□□□□□ -0.55
PCDHGC3-204ENST00000617222 TRBV19A0A075B6N1 114 aa11.62□□□□□ -0.55
PCDHGC3-204ENST00000617222 SLC17A3O00476 420 aa11.62□□□□□ -0.55
PCDHGC3-204ENST00000617222 ISLRO14498 428 aa11.62□□□□□ -0.55
PCDHGC3-204ENST00000617222 ARL14EPLP0DKL9 152 aa11.62□□□□□ -0.55
PCDHGC3-204ENST00000617222 PSMB3P49720 205 aa11.62□□□□□ -0.55
PCDHGC3-204ENST00000617222 SULT1A2P50226 295 aa11.62□□□□□ -0.55
PCDHGC3-204ENST00000617222 UBE2L3P68036 154 aaKnown RBP11.62□□□□□ -0.55
PCDHGC3-204ENST00000617222 PSMG4Q5JS54 123 aa11.62□□□□□ -0.55
PCDHGC3-204ENST00000617222 FAM74A1Q5RGS3 127 aa11.62□□□□□ -0.55
PCDHGC3-204ENST00000617222 ALKAL2Q6UX46 152 aa11.62□□□□□ -0.55
PCDHGC3-204ENST00000617222 DPPA3Q6W0C5 159 aa11.62□□□□□ -0.55
PCDHGC3-204ENST00000617222 DEFB125Q8N687 156 aa11.62□□□□□ -0.55
PCDHGC3-204ENST00000617222 SAT2Q96F10 170 aaPredicted RBP11.62□□□□□ -0.55
PCDHGC3-204ENST00000617222 PHYHIPLQ96FC7 376 aa11.62□□□□□ -0.55
PCDHGC3-204ENST00000617222 C20orf173Q96LM9 149 aa11.62□□□□□ -0.55
PCDHGC3-204ENST00000617222 MAP1LC3B2A6NCE7 125 aa11.61□□□□□ -0.55
PCDHGC3-204ENST00000617222 K7EIL1 84 aa11.61□□□□□ -0.55
PCDHGC3-204ENST00000617222 CXorf1O96002 111 aa11.61□□□□□ -0.55
PCDHGC3-204ENST00000617222 HLA-DMBP28068 263 aa11.61□□□□□ -0.55
PCDHGC3-204ENST00000617222 GCHFRP30047 84 aa11.61□□□□□ -0.55
PCDHGC3-204ENST00000617222 RAB5CP51148 216 aa11.61□□□□□ -0.55
PCDHGC3-204ENST00000617222 FGF8P55075 233 aaPredicted RBP11.61□□□□□ -0.55
PCDHGC3-204ENST00000617222 ZNF124Q15973 351 aa11.61□□□□□ -0.55
PCDHGC3-204ENST00000617222 APRG1Q8IVJ8 170 aa11.61□□□□□ -0.55
PCDHGC3-204ENST00000617222 RNF182Q8N6D2 247 aa11.61□□□□□ -0.55
PCDHGC3-204ENST00000617222 SLC50A1Q9BRV3 221 aa11.61□□□□□ -0.55
PCDHGC3-204ENST00000617222 MAP1LC3BQ9GZQ8 125 aa11.61□□□□□ -0.55
PCDHGC3-204ENST00000617222 ZNF331Q9NQX6 463 aaPredicted RBP11.61□□□□□ -0.55
PCDHGC3-204ENST00000617222 NDUFB4O95168 129 aa11.6□□□□□ -0.55
PCDHGC3-204ENST00000617222 DEFA6Q01524 100 aa11.6□□□□□ -0.55
PCDHGC3-204ENST00000617222 IQCF2Q8IXL9 164 aa11.6□□□□□ -0.55
PCDHGC3-204ENST00000617222 SFT2D1Q8WV19 159 aa11.6□□□□□ -0.55
PCDHGC3-204ENST00000617222 MBD3L1Q8WWY6 194 aa11.6□□□□□ -0.55
PCDHGC3-204ENST00000617222 FAM110AQ9BQ89 295 aa11.6□□□□□ -0.55
PCDHGC3-204ENST00000617222 NBEAL1Q6ZS30 2694 aa11.59□□□□□ -0.55
PCDHGC3-204ENST00000617222 ZNF253O75346 499 aa11.59□□□□□ -0.55
PCDHGC3-204ENST00000617222 H2AFB1P0C5Y9 115 aa11.59□□□□□ -0.55
PCDHGC3-204ENST00000617222 RANP62826 216 aaKnown RBP11.59□□□□□ -0.55
PCDHGC3-204ENST00000617222 PSG9Q00887 426 aa11.59□□□□□ -0.55
PCDHGC3-204ENST00000617222 PDE6HQ13956 83 aa11.59□□□□□ -0.55
PCDHGC3-204ENST00000617222 PSG3Q16557 428 aa11.59□□□□□ -0.55
PCDHGC3-204ENST00000617222 DEFB121Q5J5C9 76 aa11.59□□□□□ -0.55
PCDHGC3-204ENST00000617222 CITED4Q96RK1 184 aa11.59□□□□□ -0.55
PCDHGC3-204ENST00000617222 TMPRSS5Q9H3S3 457 aa11.59□□□□□ -0.55
PCDHGC3-204ENST00000617222 TUBA4BQ9H853 241 aa11.59□□□□□ -0.55
PCDHGC3-204ENST00000617222 A0A1B0GV50 99 aa11.58□□□□□ -0.56
PCDHGC3-204ENST00000617222 KNCNA6PVL3 124 aa11.58□□□□□ -0.56
PCDHGC3-204ENST00000617222 IGHV4-30-4P0DP06 118 aa11.58□□□□□ -0.56
PCDHGC3-204ENST00000617222 PRB4P10163 310 aaPredicted RBP11.58□□□□□ -0.56
PCDHGC3-204ENST00000617222 DEFB1P60022 68 aa11.58□□□□□ -0.56
PCDHGC3-204ENST00000617222 EXOC3-AS1Q8N2X6 119 aa11.58□□□□□ -0.56
PCDHGC3-204ENST00000617222 SRD5A3Q9H8P0 318 aa11.58□□□□□ -0.56
PCDHGC3-204ENST00000617222 TMEM167BQ9NRX6 74 aa11.58□□□□□ -0.56
PCDHGC3-204ENST00000617222 ZNF705FA8MVS1 300 aaPredicted RBP11.57□□□□□ -0.56
PCDHGC3-204ENST00000617222 ZNF705EA8MWA4 302 aaPredicted RBP11.57□□□□□ -0.56
PCDHGC3-204ENST00000617222 ZNF738Q8NE65 137 aa11.57□□□□□ -0.56
PCDHGC3-204ENST00000617222 SUN5Q8TC36 379 aa11.57□□□□□ -0.56
PCDHGC3-204ENST00000617222 MRAPQ8TCY5 172 aa11.57□□□□□ -0.56
PCDHGC3-204ENST00000617222 AAMDCQ9H7C9 122 aa11.57□□□□□ -0.56
PCDHGC3-204ENST00000617222 CLEC5AQ9NY25 188 aa11.57□□□□□ -0.56
PCDHGC3-204ENST00000617222 F6UB75 175 aa11.56□□□□□ -0.56
PCDHGC3-204ENST00000617222 ICAM4Q14773 271 aa11.56□□□□□ -0.56
PCDHGC3-204ENST00000617222 ACTL10Q5JWF8 245 aa11.56□□□□□ -0.56
PCDHGC3-204ENST00000617222 RPUSD4Q96CM3 377 aaKnown RBP11.56□□□□□ -0.56
PCDHGC3-204ENST00000617222 Q9H3A6 140 aa11.56□□□□□ -0.56
PCDHGC3-204ENST00000617222 DNAH3Q8TD57 4116 aa11.55□□□□□ -0.56
PCDHGC3-204ENST00000617222 PGPA6NDG6 321 aa11.55□□□□□ -0.56
PCDHGC3-204ENST00000617222 M0R3E3 92 aa11.55□□□□□ -0.56
PCDHGC3-204ENST00000617222 GDF5OSQ5U4N7 250 aa11.55□□□□□ -0.56
PCDHGC3-204ENST00000617222 EBLN2Q6P2I7 272 aa11.55□□□□□ -0.56
PCDHGC3-204ENST00000617222 TEX261Q6UWH6 196 aa11.55□□□□□ -0.56
PCDHGC3-204ENST00000617222 FOXI2Q6ZQN5 318 aa11.55□□□□□ -0.56
PCDHGC3-204ENST00000617222 LYPD1Q8N2G4 141 aa11.55□□□□□ -0.56
PCDHGC3-204ENST00000617222 PRELID1Q9Y255 219 aa11.55□□□□□ -0.56
PCDHGC3-204ENST00000617222 TRAV1-1A0A0B4J248 108 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms