RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 IFNA1P01562 189 aa11.47□□□□□ -0.57
CBWD1-225ENST00000616944 CD5P06127 495 aa11.47□□□□□ -0.57
CBWD1-225ENST00000616944 BMI1P35226 326 aa11.47□□□□□ -0.57
CBWD1-225ENST00000616944 GALR1P47211 349 aa11.47□□□□□ -0.57
CBWD1-225ENST00000616944 UBE2G2P60604 165 aa11.47□□□□□ -0.57
CBWD1-225ENST00000616944 PDE6HQ13956 83 aa11.47□□□□□ -0.57
CBWD1-225ENST00000616944 LINC00482Q8N8I6 264 aa11.47□□□□□ -0.57
CBWD1-225ENST00000616944 MLXQ9UH92 298 aa11.47□□□□□ -0.57
CBWD1-225ENST00000616944 GGTLC3B5MD39 225 aa11.46□□□□□ -0.57
CBWD1-225ENST00000616944 H3BTX0 84 aa11.46□□□□□ -0.57
CBWD1-225ENST00000616944 TAGLN2P37802 199 aaKnown RBP11.46□□□□□ -0.57
CBWD1-225ENST00000616944 MEF2BQ02080 365 aaPredicted RBP11.46□□□□□ -0.57
CBWD1-225ENST00000616944 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.46□□□□□ -0.57
CBWD1-225ENST00000616944 CCDC28AQ8IWP9 274 aa11.46□□□□□ -0.57
CBWD1-225ENST00000616944 BLNKQ8WV28 456 aa11.46□□□□□ -0.57
CBWD1-225ENST00000616944 SIGLEC8Q9NYZ4 499 aa11.46□□□□□ -0.57
CBWD1-225ENST00000616944 VAX2Q9UIW0 290 aa11.46□□□□□ -0.57
CBWD1-225ENST00000616944 NOTCH3Q9UM47 2321 aa11.46□□□□□ -0.58
CBWD1-225ENST00000616944 ZNF253O75346 499 aa11.46□□□□□ -0.58
CBWD1-225ENST00000616944 ATF4P18848 351 aaPredicted RBP11.46□□□□□ -0.58
CBWD1-225ENST00000616944 ATP5G3P48201 142 aa11.46□□□□□ -0.58
CBWD1-225ENST00000616944 CD81P60033 236 aa11.46□□□□□ -0.58
CBWD1-225ENST00000616944 EIF5A2Q9GZV4 153 aaKnown RBP11.46□□□□□ -0.58
CBWD1-225ENST00000616944 SMDT1Q9H4I9 107 aa11.46□□□□□ -0.58
CBWD1-225ENST00000616944 SORL1Q92673 2214 aa11.45□□□□□ -0.58
CBWD1-225ENST00000616944 HELTA6NFD8 242 aa11.45□□□□□ -0.58
CBWD1-225ENST00000616944 C9JQL5 133 aa11.45□□□□□ -0.58
CBWD1-225ENST00000616944 PF4P02776 101 aa11.45□□□□□ -0.58
CBWD1-225ENST00000616944 MEOX2P50222 304 aa11.45□□□□□ -0.58
CBWD1-225ENST00000616944 UQCC3Q6UW78 93 aa11.45□□□□□ -0.58
CBWD1-225ENST00000616944 TCF24Q7RTU0 167 aa11.45□□□□□ -0.58
CBWD1-225ENST00000616944 TXNDC17Q9BRA2 123 aa11.45□□□□□ -0.58
CBWD1-225ENST00000616944 C11orf94C9JXX5 98 aa11.44□□□□□ -0.58
CBWD1-225ENST00000616944 SOCS3O14543 225 aa11.44□□□□□ -0.58
CBWD1-225ENST00000616944 NDUFS6O75380 124 aaKnown RBP11.44□□□□□ -0.58
CBWD1-225ENST00000616944 RANP62826 216 aaKnown RBP11.44□□□□□ -0.58
CBWD1-225ENST00000616944 C12orf54Q6X4T0 127 aa11.44□□□□□ -0.58
CBWD1-225ENST00000616944 LYPD1Q8N2G4 141 aa11.44□□□□□ -0.58
CBWD1-225ENST00000616944 C3orf56Q8N813 242 aa11.44□□□□□ -0.58
CBWD1-225ENST00000616944 RXFP4Q8TDU9 374 aa11.44□□□□□ -0.58
CBWD1-225ENST00000616944 Q9H3A6 140 aa11.44□□□□□ -0.58
CBWD1-225ENST00000616944 ZNF331Q9NQX6 463 aaPredicted RBP11.44□□□□□ -0.58
CBWD1-225ENST00000616944 SELENOKQ9Y6D0 94 aa11.44□□□□□ -0.58
CBWD1-225ENST00000616944 ZNF785A8K8V0 405 aa11.43□□□□□ -0.58
CBWD1-225ENST00000616944 M0QZ24 198 aa11.43□□□□□ -0.58
CBWD1-225ENST00000616944 CST9LP1Q5W188 147 aa11.43□□□□□ -0.58
CBWD1-225ENST00000616944 SHISA2Q6UWI4 295 aa11.43□□□□□ -0.58
CBWD1-225ENST00000616944 NKX6-2Q9C056 277 aaPredicted RBP11.43□□□□□ -0.58
CBWD1-225ENST00000616944 NRN1Q9NPD7 142 aa11.43□□□□□ -0.58
CBWD1-225ENST00000616944 SUMO1P63165 101 aaKnown RBP11.42□□□□□ -0.58
CBWD1-225ENST00000616944 PEA15Q15121 130 aa11.42□□□□□ -0.58
CBWD1-225ENST00000616944 DCANP1Q8TF63 244 aa11.42□□□□□ -0.58
CBWD1-225ENST00000616944 OTORQ9NRC9 128 aa11.42□□□□□ -0.58
CBWD1-225ENST00000616944 TRAV8-2A0A0B4J237 113 aa11.42□□□□□ -0.58
CBWD1-225ENST00000616944 SRP19P09132 144 aaKnown RBP11.42□□□□□ -0.58
CBWD1-225ENST00000616944 DEFB114Q30KQ6 69 aa11.42□□□□□ -0.58
CBWD1-225ENST00000616944 EXOC3-AS1Q8N2X6 119 aa11.42□□□□□ -0.58
CBWD1-225ENST00000616944 SPATA3Q8NHX4 192 aa11.42□□□□□ -0.58
CBWD1-225ENST00000616944 SLC50A1Q9BRV3 221 aa11.42□□□□□ -0.58
CBWD1-225ENST00000616944 PDE6DO43924 150 aa11.41□□□□□ -0.58
CBWD1-225ENST00000616944 PSG9Q00887 426 aa11.41□□□□□ -0.58
CBWD1-225ENST00000616944 TMEM61Q8N0U2 210 aa11.41□□□□□ -0.58
CBWD1-225ENST00000616944 C11orf52Q96A22 123 aa11.41□□□□□ -0.58
CBWD1-225ENST00000616944 CITED4Q96RK1 184 aa11.41□□□□□ -0.58
CBWD1-225ENST00000616944 MS4A6AQ9H2W1 248 aa11.41□□□□□ -0.58
CBWD1-225ENST00000616944 PGPA6NDG6 321 aa11.4□□□□□ -0.58
CBWD1-225ENST00000616944 TMEM250H0YL14 139 aa11.4□□□□□ -0.58
CBWD1-225ENST00000616944 RPL11P62913 178 aaKnown RBP11.4□□□□□ -0.58
CBWD1-225ENST00000616944 CYB561D1Q8N8Q1 229 aa11.4□□□□□ -0.58
CBWD1-225ENST00000616944 C5orf17Q8NAS9 161 aa11.4□□□□□ -0.58
CBWD1-225ENST00000616944 DYNLRB2Q8TF09 96 aa11.4□□□□□ -0.58
CBWD1-225ENST00000616944 TCEAL7Q9BRU2 100 aa11.4□□□□□ -0.58
CBWD1-225ENST00000616944 TREM1Q9NP99 234 aa11.4□□□□□ -0.58
CBWD1-225ENST00000616944 TSPAN4O14817 238 aa11.39□□□□□ -0.59
CBWD1-225ENST00000616944 IGLV1-51P01701 117 aa11.39□□□□□ -0.59
CBWD1-225ENST00000616944 CD300EQ496F6 205 aaPredicted RBP11.39□□□□□ -0.59
CBWD1-225ENST00000616944 IGFL4Q6B9Z1 124 aa11.39□□□□□ -0.59
CBWD1-225ENST00000616944 SLC35B3Q9H1N7 401 aa11.39□□□□□ -0.59
CBWD1-225ENST00000616944 AAMDCQ9H7C9 122 aa11.39□□□□□ -0.59
CBWD1-225ENST00000616944 IGKV3-7A0A075B6H7 116 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 SCO2A0A1W2PP80 73 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 F6UZH7 168 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 K7EQG2 157 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 M0R3E3 92 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 ISLRO14498 428 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 SAP30O75446 220 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 HLA-DMBP28068 263 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 WFDC9Q8NEX5 89 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 TRAV2A0A0B4J234 112 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 TRAV25A0A0B4J276 109 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 TMEM218A2RU14 115 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 SLC25A5P05141 298 aaKnown RBP11.38□□□□□ -0.59
CBWD1-225ENST00000616944 SFTA3P0C7M3 94 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 GNG5P63218 68 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 SAMD13Q5VXD3 122 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 GBGT1Q8N5D6 347 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 RNF182Q8N6D2 247 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 ARL6IP6Q8N6S5 226 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 C2CD4CQ8TF44 421 aa11.38□□□□□ -0.59
CBWD1-225ENST00000616944 C16orf92Q96LL3 132 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms