RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 SRSF3P84103 164 aaKnown RBP6.04□□□□□ -1.44
PCDH9-205ENST00000614931 IGFL4Q6B9Z1 124 aa6.04□□□□□ -1.44
PCDH9-205ENST00000614931 TCF24Q7RTU0 167 aa6.04□□□□□ -1.44
PCDH9-205ENST00000614931 RARRES2Q99969 163 aa6.04□□□□□ -1.44
PCDH9-205ENST00000614931 GNG13Q9P2W3 67 aa6.04□□□□□ -1.44
PCDH9-205ENST00000614931 PEMTQ9UBM1 199 aa6.04□□□□□ -1.44
PCDH9-205ENST00000614931 IGKV3-7A0A075B6H7 116 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 TRBV19A0A075B6N1 114 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 TRAV8-2A0A0B4J237 113 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 A0A1W2PS18 150 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 FAM74A7A6NL05 159 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 GGTLC3B5MD39 225 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 C9JQL5 133 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 PAGE4O60829 102 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 NBEAP1P0C6P0 100 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 BCL2P10415 239 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 ATF4P18848 351 aaPredicted RBP6.03□□□□□ -1.44
PCDH9-205ENST00000614931 GALR1P47211 349 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 PSMB3P49720 205 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 KRTAP10-11P60412 298 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 EGFEM1PQ0D2K5 195 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 PMS2P11Q13670 270 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 ICAM4Q14773 271 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 HAGHQ16775 308 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 DEFB114Q30KQ6 69 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 TOR2AQ5JU69 321 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 S100A7AQ86SG5 101 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 COMMD7Q86VX2 200 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 TMEM61Q8N0U2 210 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 GBGT1Q8N5D6 347 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 FAM24BQ8N5W8 94 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 MRAPQ8TCY5 172 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 MARC2Q969Z3 335 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 GRAMD2BQ96HH9 432 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 NARS2Q96I59 477 aaKnown RBP6.03□□□□□ -1.44
PCDH9-205ENST00000614931 C20orf173Q96LM9 149 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 FAM210AQ96ND0 272 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 TMEM231Q9H6L2 316 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 TMEM167BQ9NRX6 74 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 MED9Q9NWA0 146 aa6.03□□□□□ -1.44
PCDH9-205ENST00000614931 NOTCH3Q9UM47 2321 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 ZNF785A8K8V0 405 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 K7EIL1 84 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 SAP30O75446 220 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 IGLV1-51P01701 117 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 GUK1Q16774 197 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 CD300EQ496F6 205 aaPredicted RBP6.02□□□□□ -1.45
PCDH9-205ENST00000614931 ZNF506Q5JVG8 444 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 EXOC3-AS1Q8N2X6 119 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 RNF182Q8N6D2 247 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 STXBP6Q8NFX7 210 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 RXFP4Q8TDU9 374 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 DYNLRB2Q8TF09 96 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 DCANP1Q8TF63 244 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 GPR82Q96P67 336 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 MCRIP2Q9BUT9 160 aaKnown RBP6.02□□□□□ -1.45
PCDH9-205ENST00000614931 GPR61Q9BZJ8 451 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 MS4A6AQ9H2W1 248 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 Q9H3A6 140 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 MANBALQ9NQG1 85 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 SIGLEC8Q9NYZ4 499 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 PFDN2Q9UHV9 154 aa6.02□□□□□ -1.45
PCDH9-205ENST00000614931 A0A1W2PRE2 83 aa6.01□□□□□ -1.45
PCDH9-205ENST00000614931 HELTA6NFD8 242 aa6.01□□□□□ -1.45
PCDH9-205ENST00000614931 RBFOX3A6NFN3 312 aa6.01□□□□□ -1.45
PCDH9-205ENST00000614931 K7EQG2 157 aa6.01□□□□□ -1.45
PCDH9-205ENST00000614931 M0R3E3 92 aa6.01□□□□□ -1.45
PCDH9-205ENST00000614931 S100A7P31151 101 aa6.01□□□□□ -1.45
PCDH9-205ENST00000614931 TFPI2P48307 235 aa6.01□□□□□ -1.45
PCDH9-205ENST00000614931 DEFB1P60022 68 aa6.01□□□□□ -1.45
PCDH9-205ENST00000614931 CD81P60033 236 aa6.01□□□□□ -1.45
PCDH9-205ENST00000614931 RANP62826 216 aaKnown RBP6.01□□□□□ -1.45
PCDH9-205ENST00000614931 SUMO1P63165 101 aaKnown RBP6.01□□□□□ -1.45
PCDH9-205ENST00000614931 GNG5P63218 68 aa6.01□□□□□ -1.45
PCDH9-205ENST00000614931 WFDC3Q8IUB2 231 aa6.01□□□□□ -1.45
PCDH9-205ENST00000614931 CCDC28AQ8IWP9 274 aa6.01□□□□□ -1.45
PCDH9-205ENST00000614931 SLC7A5P1Q8MH63 180 aa6.01□□□□□ -1.45
PCDH9-205ENST00000614931 NRN1Q9NPD7 142 aa6.01□□□□□ -1.45
PCDH9-205ENST00000614931 ZNF331Q9NQX6 463 aaPredicted RBP6.01□□□□□ -1.45
PCDH9-205ENST00000614931 RNF24Q9Y225 148 aa6.01□□□□□ -1.45
PCDH9-205ENST00000614931 SCO2A0A1W2PP80 73 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 RAB19A4D1S5 217 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 PGPA6NDG6 321 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 ZNF705FA8MVS1 300 aaPredicted RBP6□□□□□ -1.45
PCDH9-205ENST00000614931 PRAC2D3DTV9 90 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 TSPAN4O14817 238 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 ZNF253O75346 499 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 IFNA1P01562 189 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 CD5P06127 495 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 SRP19P09132 144 aaKnown RBP6□□□□□ -1.45
PCDH9-205ENST00000614931 BMI1P35226 326 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 PPT1P50897 306 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 RPL11P62913 178 aaKnown RBP6□□□□□ -1.45
PCDH9-205ENST00000614931 PDE6HQ13956 83 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 CST9LP1Q5W188 147 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 SLC50A1Q9BRV3 221 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 OTORQ9NRC9 128 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 VAX2Q9UIW0 290 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 ARL2-SNX15V9GYD0 113 aa6□□□□□ -1.45
PCDH9-205ENST00000614931 C11orf94C9JXX5 98 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms