RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 COL5A1P20908 1838 aaPredicted RBP11.32□□□□□ -0.6
CHD1-212ENST00000614616 LINC00158P58513 81 aa11.32□□□□□ -0.6
CHD1-212ENST00000614616 ZNF492Q9P255 531 aa11.32□□□□□ -0.6
CHD1-212ENST00000614616 PMS2P5A8MQ11 134 aa11.32□□□□□ -0.6
CHD1-212ENST00000614616 SRSF8Q9BRL6 282 aaKnown RBP11.31□□□□□ -0.6
CHD1-212ENST00000614616 NPYP01303 97 aa11.31□□□□□ -0.6
CHD1-212ENST00000614616 IGHV3-23P01764 117 aa11.31□□□□□ -0.6
CHD1-212ENST00000614616 PPIFP30405 207 aaKnown RBP11.31□□□□□ -0.6
CHD1-212ENST00000614616 RPUSD1Q9UJJ7 312 aaKnown RBP11.31□□□□□ -0.6
CHD1-212ENST00000614616 IGKV3-20P01619 116 aa11.31□□□□□ -0.6
CHD1-212ENST00000614616 PRSS29PA6NIE9 313 aa11.31□□□□□ -0.6
CHD1-212ENST00000614616 C8orf86Q6ZUL3 223 aa11.31□□□□□ -0.6
CHD1-212ENST00000614616 TRBV6-6A0A0A6YYG2 114 aa11.31□□□□□ -0.6
CHD1-212ENST00000614616 MAFAQ8NHW3 353 aaPredicted RBP11.31□□□□□ -0.6
CHD1-212ENST00000614616 TMEM141Q96I45 108 aa11.31□□□□□ -0.6
CHD1-212ENST00000614616 CYYR1Q96J86 154 aa11.31□□□□□ -0.6
CHD1-212ENST00000614616 IGKV2-40A0A087WW87 121 aaPredicted RBP11.3□□□□□ -0.6
CHD1-212ENST00000614616 IGKV2D-40P01614 121 aaPredicted RBP11.3□□□□□ -0.6
CHD1-212ENST00000614616 RBMY1FQ15415 496 aaKnown RBP11.3□□□□□ -0.6
CHD1-212ENST00000614616 PNRC2Q9NPJ4 139 aaKnown RBP11.3□□□□□ -0.6
CHD1-212ENST00000614616 TMEM240Q5SV17 173 aa11.3□□□□□ -0.6
CHD1-212ENST00000614616 ATP6V0E2Q8NHE4 81 aa11.3□□□□□ -0.6
CHD1-212ENST00000614616 AHRRA9YTQ3 701 aa11.3□□□□□ -0.6
CHD1-212ENST00000614616 WIPF2Q8TF74 440 aaPredicted RBP11.3□□□□□ -0.6
CHD1-212ENST00000614616 PRADC1Q9BSG0 188 aa11.3□□□□□ -0.6
CHD1-212ENST00000614616 SMKR1H3BMG3 65 aa11.3□□□□□ -0.6
CHD1-212ENST00000614616 CFHR2P36980 270 aa11.3□□□□□ -0.6
CHD1-212ENST00000614616 LINC01545Q5VT33 79 aa11.3□□□□□ -0.6
CHD1-212ENST00000614616 Q8NFD4 153 aa11.3□□□□□ -0.6
CHD1-212ENST00000614616 C15orf62A8K5M9 175 aa11.3□□□□□ -0.6
CHD1-212ENST00000614616 FAM231DQ6ZW35 169 aa11.3□□□□□ -0.6
CHD1-212ENST00000614616 PRSS46E5RG02 174 aa11.3□□□□□ -0.6
CHD1-212ENST00000614616 RPL15P61313 204 aaKnown RBP11.3□□□□□ -0.6
CHD1-212ENST00000614616 SLC22A18ASQ8N1D0 253 aa11.29□□□□□ -0.6
CHD1-212ENST00000614616 NOTCH4Q99466 2003 aa11.29□□□□□ -0.6
CHD1-212ENST00000614616 RSPO4Q2I0M5 234 aaPredicted RBP11.29□□□□□ -0.6
CHD1-212ENST00000614616 ATP5G1P05496 136 aa11.29□□□□□ -0.6
CHD1-212ENST00000614616 FAM90A27PA6NNH2 459 aa11.29□□□□□ -0.6
CHD1-212ENST00000614616 TEN1Q86WV5 123 aa11.29□□□□□ -0.6
CHD1-212ENST00000614616 E9PQ18 207 aa11.29□□□□□ -0.6
CHD1-212ENST00000614616 TDRG1Q3Y452 100 aa11.29□□□□□ -0.6
CHD1-212ENST00000614616 Q6ZVH6 145 aa11.29□□□□□ -0.6
CHD1-212ENST00000614616 PAX4O43316 350 aa11.28□□□□□ -0.6
CHD1-212ENST00000614616 SH2D6Q7Z4S9 175 aa11.28□□□□□ -0.6
CHD1-212ENST00000614616 PLCE1Q9P212 2302 aa11.28□□□□□ -0.6
CHD1-212ENST00000614616 PDE6HQ13956 83 aa11.28□□□□□ -0.6
CHD1-212ENST00000614616 RASL10AQ92737 203 aa11.28□□□□□ -0.6
CHD1-212ENST00000614616 AMTNQ6UX39 209 aa11.28□□□□□ -0.6
CHD1-212ENST00000614616 H0YJW9 148 aa11.28□□□□□ -0.6
CHD1-212ENST00000614616 IGKV1D-33P01593 117 aa11.28□□□□□ -0.6
CHD1-212ENST00000614616 IGKV1-33P01594 117 aa11.28□□□□□ -0.6
CHD1-212ENST00000614616 COL6A6A6NMZ7 2263 aa11.28□□□□□ -0.6
CHD1-212ENST00000614616 WBP1Q96G27 269 aa11.28□□□□□ -0.6
CHD1-212ENST00000614616 CARD19Q96LW7 228 aa11.28□□□□□ -0.6
CHD1-212ENST00000614616 TET2Q6N021 2002 aaPredicted RBP11.27□□□□□ -0.6
CHD1-212ENST00000614616 F8VRH5 84 aa11.27□□□□□ -0.6
CHD1-212ENST00000614616 ARMS2P0C7Q2 107 aa11.27□□□□□ -0.6
CHD1-212ENST00000614616 PLAURQ03405 335 aa11.27□□□□□ -0.6
CHD1-212ENST00000614616 FAM104BQ5XKR9 115 aa11.27□□□□□ -0.6
CHD1-212ENST00000614616 Q6ZT83 130 aa11.27□□□□□ -0.6
CHD1-212ENST00000614616 ADARB2-AS1A8MUL3 147 aa11.27□□□□□ -0.6
CHD1-212ENST00000614616 Q86TA4 180 aa11.27□□□□□ -0.6
CHD1-212ENST00000614616 A0A1W2PPI3 338 aa11.27□□□□□ -0.61
CHD1-212ENST00000614616 MORN5Q5VZ52 161 aa11.27□□□□□ -0.61
CHD1-212ENST00000614616 SIGLEC15Q6ZMC9 328 aa11.27□□□□□ -0.61
CHD1-212ENST00000614616 Q6ZS52 159 aa11.27□□□□□ -0.61
CHD1-212ENST00000614616 Q8N8P6 123 aa11.27□□□□□ -0.61
CHD1-212ENST00000614616 PTPRSQ13332 1948 aa11.27□□□□□ -0.61
CHD1-212ENST00000614616 JPT2Q9H910 190 aa11.27□□□□□ -0.61
CHD1-212ENST00000614616 IGHV3-35A0A0C4DH35 117 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 TRGV3P03979 118 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 HERV-K104P63124 156 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 A0A0U1RRA0 63 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 FAM236AA0A1B0GUQ0 79 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 FAM236BA0A1B0GV22 79 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 ANAPC10Q9UM13 185 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 IGHV3-49A0A0A0MS15 119 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 OVOL1O14753 267 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 SPXQ9BT56 116 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 ZNF576Q9H609 170 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 A0A1W2PR77 199 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 TAX1BP3O14907 124 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 HLA-DRB4P13762 266 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 GLRXP35754 106 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 SPEM2Q0P670 501 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 HLA-DRB4X5D2U9 266 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 TRGV11A0A075B6L2 103 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 C9orf172C9J069 976 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 SYNJ2BPP57105 145 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 S4R3C0 116 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 SLC25A16P16260 332 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 FOXI1Q12951 378 aa11.26□□□□□ -0.61
CHD1-212ENST00000614616 C1orf162Q8NEQ5 155 aaPredicted RBP11.26□□□□□ -0.61
CHD1-212ENST00000614616 CELA2AP08217 269 aa11.25□□□□□ -0.61
CHD1-212ENST00000614616 ZNF625Q96I27 306 aaPredicted RBP11.25□□□□□ -0.61
CHD1-212ENST00000614616 CHCHD2Q9Y6H1 151 aaPredicted RBP11.25□□□□□ -0.61
CHD1-212ENST00000614616 IGKV1-27A0A075B6S5 117 aa11.25□□□□□ -0.61
CHD1-212ENST00000614616 ZNF726P1Q15940 193 aa11.25□□□□□ -0.61
CHD1-212ENST00000614616 CLEC19AQ6UXS0 136 aa11.25□□□□□ -0.61
CHD1-212ENST00000614616 TMEM133Q9H2Q1 129 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms