RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 FXYD5Q96DB9 178 aa11.04□□□□□ -0.64
CD48-203ENST00000613788 ZNF503Q96F45 646 aa11.04□□□□□ -0.64
CD48-203ENST00000613788 TMEM167BQ9NRX6 74 aa11.04□□□□□ -0.64
CD48-203ENST00000613788 UBQLN2Q9UHD9 624 aa11.04□□□□□ -0.64
CD48-203ENST00000613788 CMYA5Q8N3K9 4069 aa11.03□□□□□ -0.64
CD48-203ENST00000613788 G3V4G9 280 aa11.03□□□□□ -0.64
CD48-203ENST00000613788 H3BQ15 152 aa11.03□□□□□ -0.64
CD48-203ENST00000613788 GCHFRP30047 84 aa11.03□□□□□ -0.64
CD48-203ENST00000613788 ID1P41134 155 aa11.03□□□□□ -0.64
CD48-203ENST00000613788 PDE6HQ13956 83 aa11.03□□□□□ -0.64
CD48-203ENST00000613788 IQCF2Q8IXL9 164 aa11.03□□□□□ -0.64
CD48-203ENST00000613788 SAT2Q96F10 170 aaPredicted RBP11.03□□□□□ -0.64
CD48-203ENST00000613788 C16orf92Q96LL3 132 aa11.03□□□□□ -0.64
CD48-203ENST00000613788 ZNF586Q9NXT0 402 aa11.03□□□□□ -0.64
CD48-203ENST00000613788 TRBV19A0A075B6N1 114 aa11.02□□□□□ -0.65
CD48-203ENST00000613788 K7EQG2 157 aa11.02□□□□□ -0.65
CD48-203ENST00000613788 HBE1P02100 147 aa11.02□□□□□ -0.65
CD48-203ENST00000613788 SNRPCP09234 159 aaKnown RBP11.02□□□□□ -0.65
CD48-203ENST00000613788 FGF8P55075 233 aaPredicted RBP11.02□□□□□ -0.65
CD48-203ENST00000613788 CMC4P56277 68 aaPredicted RBP11.02□□□□□ -0.65
CD48-203ENST00000613788 EGFEM1PQ0D2K5 195 aa11.02□□□□□ -0.65
CD48-203ENST00000613788 BLNKQ8WV28 456 aa11.02□□□□□ -0.65
CD48-203ENST00000613788 C17orf77Q96MU5 243 aa11.02□□□□□ -0.65
CD48-203ENST00000613788 SLC50A1Q9BRV3 221 aa11.02□□□□□ -0.65
CD48-203ENST00000613788 ZNF256Q9Y2P7 627 aaPredicted RBP11.02□□□□□ -0.65
CD48-203ENST00000613788 TRAV1-1A0A0B4J248 108 aa11.01□□□□□ -0.65
CD48-203ENST00000613788 ISLRO14498 428 aa11.01□□□□□ -0.65
CD48-203ENST00000613788 ZNF253O75346 499 aa11.01□□□□□ -0.65
CD48-203ENST00000613788 SNRPD3P62318 126 aaKnown RBP11.01□□□□□ -0.65
CD48-203ENST00000613788 PSG9Q00887 426 aa11.01□□□□□ -0.65
CD48-203ENST00000613788 BEAN1Q3B7T3 259 aa11.01□□□□□ -0.65
CD48-203ENST00000613788 CLEC5AQ9NY25 188 aa11.01□□□□□ -0.65
CD48-203ENST00000613788 H3BTX0 84 aa11□□□□□ -0.65
CD48-203ENST00000613788 PSMB3P49720 205 aa11□□□□□ -0.65
CD48-203ENST00000613788 ZNF767PQ75MW2 155 aa11□□□□□ -0.65
CD48-203ENST00000613788 GTSCR1Q86UQ5 136 aa11□□□□□ -0.65
CD48-203ENST00000613788 LYPD1Q8N2G4 141 aa11□□□□□ -0.65
CD48-203ENST00000613788 SUN5Q8TC36 379 aa11□□□□□ -0.65
CD48-203ENST00000613788 ZNF331Q9NQX6 463 aaPredicted RBP11□□□□□ -0.65
CD48-203ENST00000613788 NOTCH3Q9UM47 2321 aa11□□□□□ -0.65
CD48-203ENST00000613788 SOCS3O14543 225 aa10.99□□□□□ -0.65
CD48-203ENST00000613788 PPT1P50897 306 aa10.99□□□□□ -0.65
CD48-203ENST00000613788 TMPRSS5Q9H3S3 457 aa10.99□□□□□ -0.65
CD48-203ENST00000613788 PKD1L1Q8TDX9 2849 aa10.99□□□□□ -0.65
CD48-203ENST00000613788 A0A1B0GV50 99 aa10.99□□□□□ -0.65
CD48-203ENST00000613788 NDUFB4O95168 129 aa10.99□□□□□ -0.65
CD48-203ENST00000613788 RANP62826 216 aaKnown RBP10.99□□□□□ -0.65
CD48-203ENST00000613788 LINC00052Q96N35 136 aa10.99□□□□□ -0.65
CD48-203ENST00000613788 AAMDCQ9H7C9 122 aa10.99□□□□□ -0.65
CD48-203ENST00000613788 SLC17A3O00476 420 aa10.98□□□□□ -0.65
CD48-203ENST00000613788 ZNF688P0C7X2 276 aa10.98□□□□□ -0.65
CD48-203ENST00000613788 RAB14P61106 215 aa10.98□□□□□ -0.65
CD48-203ENST00000613788 IFITM2Q01629 132 aa10.98□□□□□ -0.65
CD48-203ENST00000613788 FAM110AQ9BQ89 295 aa10.98□□□□□ -0.65
CD48-203ENST00000613788 PRELID1Q9Y255 219 aa10.98□□□□□ -0.65
CD48-203ENST00000613788 TRAV8-2A0A0B4J237 113 aa10.97□□□□□ -0.65
CD48-203ENST00000613788 A0A1W2PRE2 83 aa10.97□□□□□ -0.65
CD48-203ENST00000613788 OR11H12B2RN74 326 aa10.97□□□□□ -0.65
CD48-203ENST00000613788 CD7P09564 240 aa10.97□□□□□ -0.65
CD48-203ENST00000613788 CD81P60033 236 aa10.97□□□□□ -0.65
CD48-203ENST00000613788 KRTAP10-11P60412 298 aa10.97□□□□□ -0.65
CD48-203ENST00000613788 PSG3Q16557 428 aa10.97□□□□□ -0.65
CD48-203ENST00000613788 PSMG4Q5JS54 123 aa10.97□□□□□ -0.65
CD48-203ENST00000613788 IGFL4Q6B9Z1 124 aa10.97□□□□□ -0.65
CD48-203ENST00000613788 FAM24BQ8N5W8 94 aa10.97□□□□□ -0.65
CD48-203ENST00000613788 DEFB131AP59861 70 aa10.96□□□□□ -0.65
CD48-203ENST00000613788 ICAM4Q14773 271 aa10.96□□□□□ -0.65
CD48-203ENST00000613788 KPRPQ5T749 579 aaPredicted RBP10.96□□□□□ -0.65
CD48-203ENST00000613788 EXOC3-AS1Q8N2X6 119 aa10.96□□□□□ -0.65
CD48-203ENST00000613788 LYPD6BQ8NI32 183 aa10.96□□□□□ -0.65
CD48-203ENST00000613788 NKX6-2Q9C056 277 aaPredicted RBP10.96□□□□□ -0.65
CD48-203ENST00000613788 Q9H3A6 140 aa10.96□□□□□ -0.65
CD48-203ENST00000613788 MAP6D1Q9H9H5 199 aa10.96□□□□□ -0.65
CD48-203ENST00000613788 OTORQ9NRC9 128 aa10.96□□□□□ -0.65
CD48-203ENST00000613788 PGPA6NDG6 321 aa10.95□□□□□ -0.66
CD48-203ENST00000613788 IFNA1P01562 189 aa10.95□□□□□ -0.66
CD48-203ENST00000613788 CCL20P78556 96 aa10.95□□□□□ -0.66
CD48-203ENST00000613788 PMS2P11Q13670 270 aa10.95□□□□□ -0.66
CD48-203ENST00000613788 ODF3L2Q3SX64 289 aa10.95□□□□□ -0.66
CD48-203ENST00000613788 RNF182Q8N6D2 247 aa10.95□□□□□ -0.66
CD48-203ENST00000613788 MRPL53Q96EL3 112 aaKnown RBP10.95□□□□□ -0.66
CD48-203ENST00000613788 PRR25Q96S07 402 aa10.95□□□□□ -0.66
CD48-203ENST00000613788 MANBALQ9NQG1 85 aa10.95□□□□□ -0.66
CD48-203ENST00000613788 ARL2-SNX15V9GYD0 113 aa10.95□□□□□ -0.66
CD48-203ENST00000613788 HLA-DMBP28068 263 aa10.94□□□□□ -0.66
CD48-203ENST00000613788 CSN1S1P47710 185 aa10.94□□□□□ -0.66
CD48-203ENST00000613788 UBE2G2P60604 165 aa10.94□□□□□ -0.66
CD48-203ENST00000613788 ZNF738Q8NE65 137 aa10.94□□□□□ -0.66
CD48-203ENST00000613788 CMTM2Q8TAZ6 248 aa10.94□□□□□ -0.66
CD48-203ENST00000613788 RXFP4Q8TDU9 374 aa10.94□□□□□ -0.66
CD48-203ENST00000613788 C20orf173Q96LM9 149 aa10.94□□□□□ -0.66
CD48-203ENST00000613788 GNG13Q9P2W3 67 aa10.94□□□□□ -0.66
CD48-203ENST00000613788 FAM74A7A6NL05 159 aa10.94□□□□□ -0.66
CD48-203ENST00000613788 PAGE4O60829 102 aa10.94□□□□□ -0.66
CD48-203ENST00000613788 NMBP08949 121 aa10.94□□□□□ -0.66
CD48-203ENST00000613788 TAGLN2P37802 199 aaKnown RBP10.94□□□□□ -0.66
CD48-203ENST00000613788 SUMO1P63165 101 aaKnown RBP10.94□□□□□ -0.66
CD48-203ENST00000613788 CST9LP1Q5W188 147 aa10.94□□□□□ -0.66
CD48-203ENST00000613788 PCNPQ8WW12 178 aaKnown RBP10.94□□□□□ -0.66
CD48-203ENST00000613788 RPUSD4Q96CM3 377 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms