RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 SAMD13Q5VXD3 122 aa13.1□□□□□ -0.31
CNOT3-208ENST00000613073 MAP1LC3CQ9BXW4 147 aa13.1□□□□□ -0.31
CNOT3-208ENST00000613073 AMMECR1Q9Y4X0 333 aaPredicted RBP13.1□□□□□ -0.31
CNOT3-208ENST00000613073 MAP1AP78559 2803 aaPredicted RBP13.1□□□□□ -0.31
CNOT3-208ENST00000613073 FNDC10F2Z333 226 aa13.1□□□□□ -0.31
CNOT3-208ENST00000613073 CRXO43186 299 aaPredicted RBP13.1□□□□□ -0.31
CNOT3-208ENST00000613073 GTF2H5Q6ZYL4 71 aa13.1□□□□□ -0.31
CNOT3-208ENST00000613073 UBTD1Q9HAC8 227 aa13.1□□□□□ -0.31
CNOT3-208ENST00000613073 ACACBO00763 2458 aa13.1□□□□□ -0.31
CNOT3-208ENST00000613073 OR2J3O76001 311 aa13.09□□□□□ -0.31
CNOT3-208ENST00000613073 FSTL3O95633 263 aa13.09□□□□□ -0.31
CNOT3-208ENST00000613073 HIST1H1EP10412 219 aaKnown RBP13.09□□□□□ -0.31
CNOT3-208ENST00000613073 BMI1P35226 326 aa13.09□□□□□ -0.31
CNOT3-208ENST00000613073 KLRD1Q13241 179 aa13.09□□□□□ -0.31
CNOT3-208ENST00000613073 TMEM97Q5BJF2 176 aa13.09□□□□□ -0.31
CNOT3-208ENST00000613073 PGLYRP4Q96LB8 373 aa13.09□□□□□ -0.31
CNOT3-208ENST00000613073 UFSP1Q6NVU6 142 aa13.09□□□□□ -0.31
CNOT3-208ENST00000613073 C8orf46Q8TAG6 207 aa13.09□□□□□ -0.31
CNOT3-208ENST00000613073 GTSF1LQ9H1H1 148 aa13.09□□□□□ -0.31
CNOT3-208ENST00000613073 IGSF10Q6WRI0 2623 aa13.09□□□□□ -0.31
CNOT3-208ENST00000613073 ATP5IP56385 69 aaPredicted RBP13.09□□□□□ -0.31
CNOT3-208ENST00000613073 RPL24P83731 157 aaKnown RBP13.09□□□□□ -0.31
CNOT3-208ENST00000613073 NEU4Q8WWR8 484 aaPredicted RBP13.09□□□□□ -0.31
CNOT3-208ENST00000613073 NPIPB3Q92617 1050 aa13.09□□□□□ -0.31
CNOT3-208ENST00000613073 FBXL15Q9H469 300 aa13.09□□□□□ -0.31
CNOT3-208ENST00000613073 MRPL36Q9P0J6 103 aaKnown RBP13.09□□□□□ -0.31
CNOT3-208ENST00000613073 IGHV3-21A0A0B4J1V1 117 aa13.08□□□□□ -0.32
CNOT3-208ENST00000613073 FBLL1A6NHQ2 334 aaKnown RBP13.08□□□□□ -0.32
CNOT3-208ENST00000613073 C19orf84I3L1E1 186 aa13.08□□□□□ -0.32
CNOT3-208ENST00000613073 LY6G5BQ8NDX9 201 aa13.08□□□□□ -0.32
CNOT3-208ENST00000613073 ITLN2Q8WWU7 325 aaPredicted RBP13.08□□□□□ -0.32
CNOT3-208ENST00000613073 SIGLEC9Q9Y336 463 aa13.08□□□□□ -0.32
CNOT3-208ENST00000613073 FLNCQ14315 2725 aa13.08□□□□□ -0.32
CNOT3-208ENST00000613073 ZNF207O43670 478 aaKnown RBP13.08□□□□□ -0.32
CNOT3-208ENST00000613073 HLA-DRB1P01911 266 aa13.08□□□□□ -0.32
CNOT3-208ENST00000613073 TAS2R45P59539 299 aa13.08□□□□□ -0.32
CNOT3-208ENST00000613073 SMAGPQ0VAQ4 97 aa13.08□□□□□ -0.32
CNOT3-208ENST00000613073 RUSC1-AS1Q66K80 236 aa13.08□□□□□ -0.32
CNOT3-208ENST00000613073 RASL11AQ6T310 242 aa13.08□□□□□ -0.32
CNOT3-208ENST00000613073 NCR2O95944 276 aa13.07□□□□□ -0.32
CNOT3-208ENST00000613073 C8orf88P0DMB2 117 aa13.07□□□□□ -0.32
CNOT3-208ENST00000613073 RPL27AP46776 148 aaKnown RBP13.07□□□□□ -0.32
CNOT3-208ENST00000613073 SUB1P53999 127 aaKnown RBP eCLIP13.07□□□□□ -0.32
CNOT3-208ENST00000613073 PLP1P60201 277 aa13.07□□□□□ -0.32
CNOT3-208ENST00000613073 HBBP68871 147 aa13.07□□□□□ -0.32
CNOT3-208ENST00000613073 TM4SF20Q53R12 229 aa13.07□□□□□ -0.32
CNOT3-208ENST00000613073 CACNG8Q8WXS5 425 aa13.07□□□□□ -0.32
CNOT3-208ENST00000613073 INS-IGF2F8WCM5 200 aa13.06□□□□□ -0.32
CNOT3-208ENST00000613073 TIMM23O14925 209 aa13.06□□□□□ -0.32
CNOT3-208ENST00000613073 RBP4P02753 201 aa13.06□□□□□ -0.32
CNOT3-208ENST00000613073 PLGLAQ15195 96 aa13.06□□□□□ -0.32
CNOT3-208ENST00000613073 DTX2Q86UW9 622 aa13.06□□□□□ -0.32
CNOT3-208ENST00000613073 PPP1R27Q86WC6 154 aa13.06□□□□□ -0.32
CNOT3-208ENST00000613073 OR2K2Q8NGT1 345 aa13.06□□□□□ -0.32
CNOT3-208ENST00000613073 OR10AG1Q8NH19 301 aa13.06□□□□□ -0.32
CNOT3-208ENST00000613073 PERPQ96FX8 193 aa13.06□□□□□ -0.32
CNOT3-208ENST00000613073 TMUB1Q9BVT8 246 aa13.06□□□□□ -0.32
CNOT3-208ENST00000613073 THYN1Q9P016 225 aa13.06□□□□□ -0.32
CNOT3-208ENST00000613073 PRB4P10163 310 aaPredicted RBP13.06□□□□□ -0.32
CNOT3-208ENST00000613073 SLC25A33Q9BSK2 321 aa13.06□□□□□ -0.32
CNOT3-208ENST00000613073 A0A0G2JLM5 398 aa13.05□□□□□ -0.32
CNOT3-208ENST00000613073 C9orf118A6NHY6 69 aa13.05□□□□□ -0.32
CNOT3-208ENST00000613073 LY6LH3BQJ8 138 aa13.05□□□□□ -0.32
CNOT3-208ENST00000613073 K7EP34 96 aa13.05□□□□□ -0.32
CNOT3-208ENST00000613073 PEX7O00628 323 aa13.05□□□□□ -0.32
CNOT3-208ENST00000613073 CRYGBP07316 175 aa13.05□□□□□ -0.32
CNOT3-208ENST00000613073 COX8AP10176 69 aa13.05□□□□□ -0.32
CNOT3-208ENST00000613073 KIR3DS1Q14943 382 aa13.05□□□□□ -0.32
CNOT3-208ENST00000613073 LINC00322Q6ZN03 302 aaPredicted RBP13.05□□□□□ -0.32
CNOT3-208ENST00000613073 RABAC1Q9UI14 185 aa13.05□□□□□ -0.32
CNOT3-208ENST00000613073 A0A1B0GXF2 115 aa13.05□□□□□ -0.32
CNOT3-208ENST00000613073 ZFHX3Q15911 3703 aa13.05□□□□□ -0.32
CNOT3-208ENST00000613073 BLNKQ8WV28 456 aa13.04□□□□□ -0.32
CNOT3-208ENST00000613073 SLC25A2Q9BXI2 301 aa13.04□□□□□ -0.32
CNOT3-208ENST00000613073 GTSF1Q8WW33 167 aa13.04□□□□□ -0.32
CNOT3-208ENST00000613073 SPCS1Q9Y6A9 102 aa13.04□□□□□ -0.32
CNOT3-208ENST00000613073 CELSR1Q9NYQ6 3014 aa13.04□□□□□ -0.32
CNOT3-208ENST00000613073 H3BTX0 84 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 AZU1P20160 251 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 ZFP36P26651 326 aaKnown RBP13.03□□□□□ -0.32
CNOT3-208ENST00000613073 PET117Q6UWS5 81 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 PRSS57Q6UWY2 283 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 CHCHD1Q96BP2 118 aaKnown RBP13.03□□□□□ -0.32
CNOT3-208ENST00000613073 DPM3Q9P2X0 92 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 CHEK1O14757 476 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 MOSP00540 346 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 SEC11AP67812 179 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 CFAP161Q6P656 301 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 FAM231DQ6ZW35 169 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 FAM167A-AS1Q96KT0 104 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 MS4A6AQ9H2W1 248 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 C1RLQ9NZP8 487 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 CRYBG3Q68DQ2 2970 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 UTP20O75691 2785 aaKnown RBP13.03□□□□□ -0.32
CNOT3-208ENST00000613073 IGKV1D-37A0A075B6S9 117 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 ZNF329Q86UD4 541 aa13.03□□□□□ -0.32
CNOT3-208ENST00000613073 TEX48A0A1B0GUV7 120 aa13.02□□□□□ -0.32
CNOT3-208ENST00000613073 OR5AL1P0C617 328 aa13.02□□□□□ -0.32
CNOT3-208ENST00000613073 NEGR1Q7Z3B1 354 aa13.02□□□□□ -0.32
CNOT3-208ENST00000613073 OR8A1Q8NGG7 326 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms