RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 MUC21Q5SSG8 566 aa11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 RNASEKQ6P5S7 137 aaKnown RBP11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 BPIFA4PQ86YQ2 179 aa11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 TPPP3Q9BW30 176 aa11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 CENPEQ02224 2701 aa11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 IGSF10Q6WRI0 2623 aa11.03□□□□□ -0.64
PCDHGA3-202ENST00000612467 IGHV3OR16-13A0A075B7E8 117 aa11.02□□□□□ -0.64
PCDHGA3-202ENST00000612467 TMSB15BA0A087X1C1 80 aa11.02□□□□□ -0.64
PCDHGA3-202ENST00000612467 IGHV7-81A0A0B4J1V7 117 aa11.02□□□□□ -0.64
PCDHGA3-202ENST00000612467 IGHV3-74A0A0B4J1X5 117 aa11.02□□□□□ -0.64
PCDHGA3-202ENST00000612467 A0A1B0GXF2 115 aa11.02□□□□□ -0.64
PCDHGA3-202ENST00000612467 MRPS12O15235 138 aaKnown RBP11.02□□□□□ -0.64
PCDHGA3-202ENST00000612467 ZNF138P52744 262 aa11.02□□□□□ -0.64
PCDHGA3-202ENST00000612467 ZNF562Q6V9R5 426 aa11.02□□□□□ -0.64
PCDHGA3-202ENST00000612467 ZNF705AQ6ZN79 300 aaPredicted RBP11.02□□□□□ -0.64
PCDHGA3-202ENST00000612467 DAZAP1Q96EP5 407 aaKnown RBP11.02□□□□□ -0.64
PCDHGA3-202ENST00000612467 URB1-AS1Q96HZ7 61 aa11.02□□□□□ -0.64
PCDHGA3-202ENST00000612467 ALKBH7Q9BT30 221 aaPredicted RBP11.02□□□□□ -0.64
PCDHGA3-202ENST00000612467 SIRPDQ9H106 197 aa11.02□□□□□ -0.64
PCDHGA3-202ENST00000612467 IGHV3-66A0A0C4DH42 116 aa11.02□□□□□ -0.65
PCDHGA3-202ENST00000612467 KIR2DL5BA0A0G2JN68 375 aa11.02□□□□□ -0.65
PCDHGA3-202ENST00000612467 KIR2DL5BA0A0G2JPC4 375 aa11.02□□□□□ -0.65
PCDHGA3-202ENST00000612467 DIRC3C9JPN6 131 aa11.02□□□□□ -0.65
PCDHGA3-202ENST00000612467 C3orf79P0CE67 100 aa11.02□□□□□ -0.65
PCDHGA3-202ENST00000612467 CRIP1P50238 77 aa11.02□□□□□ -0.65
PCDHGA3-202ENST00000612467 KIR2DL5AQ8N109 375 aa11.02□□□□□ -0.65
PCDHGA3-202ENST00000612467 OR4F17Q8NGA8 305 aa11.02□□□□□ -0.65
PCDHGA3-202ENST00000612467 AJUBAQ96IF1 538 aa11.02□□□□□ -0.65
PCDHGA3-202ENST00000612467 ZNF414Q96IQ9 312 aa11.02□□□□□ -0.65
PCDHGA3-202ENST00000612467 TMEM14CQ9P0S9 112 aa11.02□□□□□ -0.65
PCDHGA3-202ENST00000612467 Q8N6K4 173 aa11.01□□□□□ -0.65
PCDHGA3-202ENST00000612467 TMEM208Q9BTX3 173 aa11.01□□□□□ -0.65
PCDHGA3-202ENST00000612467 C21orf62Q9NYP8 219 aa11.01□□□□□ -0.65
PCDHGA3-202ENST00000612467 LINC00527Q9UJ94 153 aa11.01□□□□□ -0.65
PCDHGA3-202ENST00000612467 G3V318 75 aa11.01□□□□□ -0.65
PCDHGA3-202ENST00000612467 SAA4P35542 130 aa11.01□□□□□ -0.65
PCDHGA3-202ENST00000612467 TEX43Q6ZNM6 134 aa11.01□□□□□ -0.65
PCDHGA3-202ENST00000612467 Q8N9W7 124 aa11.01□□□□□ -0.65
PCDHGA3-202ENST00000612467 WIPF2Q8TF74 440 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA3-202ENST00000612467 ITLN2Q8WWU7 325 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA3-202ENST00000612467 TMUB1Q9BVT8 246 aa11.01□□□□□ -0.65
PCDHGA3-202ENST00000612467 CLEC5AQ9NY25 188 aa11.01□□□□□ -0.65
PCDHGA3-202ENST00000612467 SOX21Q9Y651 276 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA3-202ENST00000612467 IGKV2-40A0A087WW87 121 aaPredicted RBP11□□□□□ -0.65
PCDHGA3-202ENST00000612467 WI2-2373I1.2A0A1W2PRP0 233 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 IGKV2D-40P01614 121 aaPredicted RBP11□□□□□ -0.65
PCDHGA3-202ENST00000612467 PIP4P2Q8N4L2 257 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 IGHV3-49A0A0A0MS15 119 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 MFAP4P55083 255 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 HBBP68871 147 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 TMEM219Q86XT9 240 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 PSG8Q9UQ74 426 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 A8MWL6 223 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 OVOL3O00110 214 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 LINC00173Q6ZV60 143 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 SPATA12Q7Z6I5 190 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 Q8TAT8 98 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 VAMP8Q9BV40 100 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 C1RLQ9NZP8 487 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 POLQO75417 2590 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 MYO18BQ8IUG5 2567 aa11□□□□□ -0.65
PCDHGA3-202ENST00000612467 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 CACNA1AO00555 2505 aa10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 CTSGP08311 255 aa10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 ARMS2P0C7Q2 107 aa10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 GPR183P32249 361 aa10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 TIMM8BQ9Y5J9 83 aaPredicted RBP10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 ACACBO00763 2458 aa10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 NPIPB5A8MRT5 1133 aa10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 ATP6V0E1O15342 81 aa10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 HSBP1O75506 76 aa10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 LMO4P61968 165 aa10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 EBLN2Q6P2I7 272 aa10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 TTC9CQ8N5M4 171 aa10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 SRSF8Q9BRL6 282 aaKnown RBP10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 PPP1R14DQ9NXH3 145 aa10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 TP73-AS1Q9UF72 201 aa10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 GOLT1BQ9Y3E0 138 aa10.99□□□□□ -0.65
PCDHGA3-202ENST00000612467 IGHV2-70DA0A0C4DH43 119 aa10.98□□□□□ -0.65
PCDHGA3-202ENST00000612467 COX19Q49B96 90 aa10.98□□□□□ -0.65
PCDHGA3-202ENST00000612467 ARL6IP6Q8N6S5 226 aa10.98□□□□□ -0.65
PCDHGA3-202ENST00000612467 MCRIP2Q9BUT9 160 aaKnown RBP10.98□□□□□ -0.65
PCDHGA3-202ENST00000612467 M0R2Z0 102 aa10.98□□□□□ -0.65
PCDHGA3-202ENST00000612467 ZNF207O43670 478 aaKnown RBP10.98□□□□□ -0.65
PCDHGA3-202ENST00000612467 CSN3P07498 182 aa10.98□□□□□ -0.65
PCDHGA3-202ENST00000612467 CCDC144NLQ6NUI1 221 aa10.98□□□□□ -0.65
PCDHGA3-202ENST00000612467 CSPG4Q6UVK1 2322 aa10.98□□□□□ -0.65
PCDHGA3-202ENST00000612467 UNQ5815/PRO19632Q6UWF5 114 aa10.98□□□□□ -0.65
PCDHGA3-202ENST00000612467 ZNF492Q9P255 531 aa10.98□□□□□ -0.65
PCDHGA3-202ENST00000612467 SMAD5-AS1Q9Y6J3 95 aa10.98□□□□□ -0.65
PCDHGA3-202ENST00000612467 DLEU1O43261 78 aa10.97□□□□□ -0.65
PCDHGA3-202ENST00000612467 EFNA4P52798 201 aa10.97□□□□□ -0.65
PCDHGA3-202ENST00000612467 BATFQ16520 125 aa10.97□□□□□ -0.65
PCDHGA3-202ENST00000612467 BRD3OSQ6XYD6 125 aa10.97□□□□□ -0.65
PCDHGA3-202ENST00000612467 RBPMS2Q6ZRY4 209 aaKnown RBP10.97□□□□□ -0.65
PCDHGA3-202ENST00000612467 M0R143 59 aa10.97□□□□□ -0.65
PCDHGA3-202ENST00000612467 PSG3Q16557 428 aa10.97□□□□□ -0.65
PCDHGA3-202ENST00000612467 C15orf32Q32M92 178 aa10.97□□□□□ -0.65
PCDHGA3-202ENST00000612467 NPIPB6E9PJ23 425 aa10.96□□□□□ -0.65
PCDHGA3-202ENST00000612467 APOHP02749 345 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms