RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ORMDL3Q8N138 153 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 SLC50A1Q9BRV3 221 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 FABP5P3A8MUU1 101 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 LINC00614P0C842 121 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 GP9P14770 177 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 C1orf122Q6ZSJ8 110 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 RITA1Q96K30 269 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 LINC00527Q9UJ94 153 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 TWIST1Q15672 202 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 C1orf159Q96HA4 380 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 C16orf92Q96LL3 132 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 PMCHL2Q9BQD1 86 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 TMEM14CQ9P0S9 112 aa5.07□□□□□ -1.6
SNX13-213ENST00000611725 IGKV1D-37A0A075B6S9 117 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 LOC389332A0A1B0GUA5 103 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 A0A1W2PS18 150 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 NPIPB5A8MRT5 1133 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 NIT1Q86X76 327 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 FER1L6-AS1Q8NA97 138 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 ALKBH7Q9BT30 221 aaPredicted RBP5.06□□□□□ -1.6
SNX13-213ENST00000611725 C7orf69Q9H7B7 122 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 IGHV3-66A0A0C4DH42 116 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 K7EIM0 57 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 ASPHD1Q5U4P2 390 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 C12orf54Q6X4T0 127 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 CLEC5AQ9NY25 188 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 SH2D7A6NKC9 451 aaPredicted RBP5.06□□□□□ -1.6
SNX13-213ENST00000611725 SAA4P35542 130 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 KHDC1LQ5JSQ8 128 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 OR11H6Q8NGC7 330 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 Q8TAT8 98 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 LOC102724200A0A096LPH7 203 aaPredicted RBP5.06□□□□□ -1.6
SNX13-213ENST00000611725 SMIM27A0A1W2PRY6 76 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 PTTG1IPP53801 180 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 TMEM208Q9BTX3 173 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 CPAMD8Q8IZJ3 1885 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 ACANP16112 2415 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 NUP210LQ5VU65 1888 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 IGHV3-11P01762 117 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 ARMS2P0C7Q2 107 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 UBE2E1P51965 193 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 PET117Q6UWS5 81 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 UNQ6494/PRO21346Q6UXR6 183 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 PIMREGQ9BSJ6 248 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 GFRA4Q9GZZ7 299 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 NBEAQ8NFP9 2946 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 F2Z2F3 143 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 TEX43Q6ZNM6 134 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 ZNF738Q8NE65 137 aa5.06□□□□□ -1.6
SNX13-213ENST00000611725 I3L2K1 104 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 ZNF138P52744 262 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 RCHY1Q96PM5 261 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 TEX22C9J3V5 150 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 NUDT3O95989 172 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 PSG3Q16557 428 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 XIRP2A4UGR9 3374 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 FAM181BA6NEQ2 426 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 COL25A1Q9BXS0 654 aaPredicted RBP5.05□□□□□ -1.6
SNX13-213ENST00000611725 KLF12Q9Y4X4 402 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 IGKV2-40A0A087WW87 121 aaPredicted RBP5.05□□□□□ -1.6
SNX13-213ENST00000611725 TRAV40A0A0B4J280 105 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 IGKV2D-40P01614 121 aaPredicted RBP5.05□□□□□ -1.6
SNX13-213ENST00000611725 FCER1GP30273 86 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 IGFL4Q6B9Z1 124 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 CHCHD1Q96BP2 118 aaKnown RBP5.05□□□□□ -1.6
SNX13-213ENST00000611725 IGF2BP2-AS1Q96M15 143 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 ASCL2Q99929 193 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 TRAV41A0A0B4J266 112 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 F5H697 171 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 DLEU1O43261 78 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 LYZL1Q6UWQ5 148 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 BRD3OSQ6XYD6 125 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 WIPF2Q8TF74 440 aaPredicted RBP5.05□□□□□ -1.6
SNX13-213ENST00000611725 MAP1LC3AQ9H492 121 aa5.05□□□□□ -1.6
SNX13-213ENST00000611725 H3BRN7 92 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 IGLV2-8P01709 118 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 PPBPP02775 128 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 G3V318 75 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 LTAP01374 205 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 SMIM17P0DL12 118 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 ZNF841Q6ZN19 808 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 OR10J6PQ8NGY7 276 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 FAM110DQ8TAY7 271 aaPredicted RBP5.04□□□□□ -1.6
SNX13-213ENST00000611725 ATP6V0E1O15342 81 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 GNLYP22749 145 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 HIST1H1AQ02539 215 aaPredicted RBP5.04□□□□□ -1.6
SNX13-213ENST00000611725 FAM106AQ4KMX7 169 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 TMEM219Q86XT9 240 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 ZNF414Q96IQ9 312 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 NPFFO15130 113 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 IGLC2P0DOY2 106 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 IGLC3P0DOY3 106 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 A0A0G2JLM5 398 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 TCTAP57738 103 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 ADORA2A-AS1P86434 159 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 CYB5R2Q6BCY4 276 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 PRR25Q96S07 402 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 MOB4Q9Y3A3 225 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 MGAQ8IWI9 3026 aa5.04□□□□□ -1.6
SNX13-213ENST00000611725 PPIFP30405 207 aaKnown RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms