RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 SYS1-DBNDD2H3BUS1 97 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 K7ENP7 123 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 MGPP08493 103 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 TSPOP30536 169 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 LY6EQ16553 131 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 C21orf62-AS1Q17RA5 79 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 LYZL1Q6UWQ5 148 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 IGF2BP2-AS1Q96M15 143 aa6.93□□□□□ -1.3
LIG4-204ENST00000611712 TRBV19A0A075B6N1 114 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 IGLC2P0DOY2 106 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 IGLC3P0DOY3 106 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 PRTN3P24158 256 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 CT83Q5H943 113 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 DMRTC2Q8IXT2 367 aaPredicted RBP6.92□□□□□ -1.3
LIG4-204ENST00000611712 LYPD1Q8N2G4 141 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 IGF2RP11717 2491 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 LAMA1P25391 3075 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 D6R8Y8 96 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 C15orf32Q32M92 178 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 COL25A1Q9BXS0 654 aaPredicted RBP6.92□□□□□ -1.3
LIG4-204ENST00000611712 LINC00574Q9H8X3 128 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 ST20Q9HBF5 79 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 IGLV2-23P01705 113 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 OR10J6PQ8NGY7 276 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 IGFBPL1Q8WX77 278 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 SRSF8Q9BRL6 282 aaKnown RBP6.92□□□□□ -1.3
LIG4-204ENST00000611712 GFRA4Q9GZZ7 299 aa6.92□□□□□ -1.3
LIG4-204ENST00000611712 M0R1W7 72 aa6.91□□□□□ -1.3
LIG4-204ENST00000611712 TRGV3P03979 118 aa6.91□□□□□ -1.3
LIG4-204ENST00000611712 GRNP28799 593 aaKnown RBP6.91□□□□□ -1.3
LIG4-204ENST00000611712 KHDC1LQ5JSQ8 128 aa6.91□□□□□ -1.3
LIG4-204ENST00000611712 GTF2H5Q6ZYL4 71 aa6.91□□□□□ -1.3
LIG4-204ENST00000611712 ZNF562Q6V9R5 426 aa6.91□□□□□ -1.3
LIG4-204ENST00000611712 ZNF841Q6ZN19 808 aa6.91□□□□□ -1.3
LIG4-204ENST00000611712 MRPL52Q86TS9 123 aaKnown RBP6.91□□□□□ -1.3
LIG4-204ENST00000611712 RAB37Q96AX2 223 aa6.91□□□□□ -1.3
LIG4-204ENST00000611712 C17orf77Q96MU5 243 aa6.91□□□□□ -1.3
LIG4-204ENST00000611712 NOTCH3Q9UM47 2321 aa6.91□□□□□ -1.3
LIG4-204ENST00000611712 C7orf71A4D174 169 aa6.91□□□□□ -1.3
LIG4-204ENST00000611712 FXYD7P58549 80 aa6.91□□□□□ -1.3
LIG4-204ENST00000611712 LINC00527Q9UJ94 153 aa6.91□□□□□ -1.3
LIG4-204ENST00000611712 FAM231BA6NCW3 169 aa6.9□□□□□ -1.3
LIG4-204ENST00000611712 GAGE10A6NGK3 116 aa6.9□□□□□ -1.3
LIG4-204ENST00000611712 FBLL1A6NHQ2 334 aaKnown RBP6.9□□□□□ -1.3
LIG4-204ENST00000611712 SH2D1AO60880 128 aa6.9□□□□□ -1.3
LIG4-204ENST00000611712 NCR2O95944 276 aa6.9□□□□□ -1.3
LIG4-204ENST00000611712 INS-IGF2F8WCM5 200 aa6.9□□□□□ -1.3
LIG4-204ENST00000611712 CACNG7P62955 275 aa6.9□□□□□ -1.3
LIG4-204ENST00000611712 MAJINQ3KP22 176 aa6.9□□□□□ -1.3
LIG4-204ENST00000611712 AMN1Q8IY45 258 aa6.9□□□□□ -1.3
LIG4-204ENST00000611712 WIPF2Q8TF74 440 aaPredicted RBP6.9□□□□□ -1.3
LIG4-204ENST00000611712 C1orf159Q96HA4 380 aa6.9□□□□□ -1.3
LIG4-204ENST00000611712 KLK15Q9H2R5 256 aa6.9□□□□□ -1.3
LIG4-204ENST00000611712 TMEM14CQ9P0S9 112 aa6.9□□□□□ -1.3
LIG4-204ENST00000611712 ATRXP46100 2492 aa6.9□□□□□ -1.3
LIG4-204ENST00000611712 A1L4Q6 167 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 NDUFB8O95169 186 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 LTAP01374 205 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 HBDP02042 147 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 SFTPCP11686 197 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 GCSHP23434 173 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 TCF15Q12870 199 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 MPV17L2Q567V2 206 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 CLEC2AQ6UVW9 174 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 IGKV1D-37A0A075B6S9 117 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 OOSP1A8MZH6 123 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 IGLV2-8P01709 118 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 GP9P14770 177 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 IGLL1P15814 213 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 MINOS1Q5TGZ0 78 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 ZC2HC1AQ96GY0 325 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 C8orf49Q96NF6 230 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 PHLDA3Q9Y5J5 127 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 MINOS1-NBL1R4GNA1 71 aa6.9□□□□□ -1.31
LIG4-204ENST00000611712 DSCAMO60469 2012 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 IGKV1-17P01599 117 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 LY6DQ14210 128 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 TM4SF20Q53R12 229 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 ZNF491Q8N8L2 437 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 TMEM213A2RRL7 107 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 H3BRN7 92 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 M0R381 172 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 PDE6HQ13956 83 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 TMEM75Q8N9X5 138 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 SLC50A1Q9BRV3 221 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 VCANP13611 3396 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 IGHV1-24A0A0C4DH33 117 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 IGLV1-47P01700 117 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 IGHV3-11P01762 117 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 EVI2AP22794 236 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 IFI27P40305 119 aaPredicted RBP6.89□□□□□ -1.31
LIG4-204ENST00000611712 HIST1H1AQ02539 215 aaPredicted RBP6.89□□□□□ -1.31
LIG4-204ENST00000611712 TMEM219Q86XT9 240 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 IFI27L1Q96BM0 104 aa6.89□□□□□ -1.31
LIG4-204ENST00000611712 SMKR1H3BMG3 65 aa6.88□□□□□ -1.31
LIG4-204ENST00000611712 ESDP10768 282 aa6.88□□□□□ -1.31
LIG4-204ENST00000611712 ATP5J2P56134 94 aa6.88□□□□□ -1.31
LIG4-204ENST00000611712 TMEM190Q8WZ59 177 aa6.88□□□□□ -1.31
LIG4-204ENST00000611712 TMEM160Q9NX00 188 aa6.88□□□□□ -1.31
LIG4-204ENST00000611712 TANC2Q9HCD6 1990 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms