RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 MRPL16Q9NX20 251 aaKnown RBP11.18□□□□□ -0.62
MUC1-223ENST00000611571 ZNF106Q9H2Y7 1883 aaKnown RBP11.17□□□□□ -0.62
MUC1-223ENST00000611571 MORN5Q5VZ52 161 aa11.17□□□□□ -0.62
MUC1-223ENST00000611571 PET117Q6UWS5 81 aa11.17□□□□□ -0.62
MUC1-223ENST00000611571 SPACA3Q8IXA5 215 aa11.17□□□□□ -0.62
MUC1-223ENST00000611571 DOPEY1Q5JWR5 2465 aa11.17□□□□□ -0.62
MUC1-223ENST00000611571 CRXO43186 299 aaPredicted RBP11.17□□□□□ -0.62
MUC1-223ENST00000611571 IGLC2P0DOY2 106 aa11.17□□□□□ -0.62
MUC1-223ENST00000611571 IGLC3P0DOY3 106 aa11.17□□□□□ -0.62
MUC1-223ENST00000611571 IGLL1P15814 213 aa11.17□□□□□ -0.62
MUC1-223ENST00000611571 PSMB11A5LHX3 300 aa11.17□□□□□ -0.62
MUC1-223ENST00000611571 YPEL3P61236 119 aaPredicted RBP11.17□□□□□ -0.62
MUC1-223ENST00000611571 LY6DQ14210 128 aa11.17□□□□□ -0.62
MUC1-223ENST00000611571 VWC2Q2TAL6 325 aa11.17□□□□□ -0.62
MUC1-223ENST00000611571 OR2K2Q8NGT1 345 aa11.17□□□□□ -0.62
MUC1-223ENST00000611571 ID1P41134 155 aa11.17□□□□□ -0.62
MUC1-223ENST00000611571 Q0VG73 95 aa11.17□□□□□ -0.62
MUC1-223ENST00000611571 LCNL1Q6ZST4 164 aa11.16□□□□□ -0.62
MUC1-223ENST00000611571 COL4A4P53420 1690 aaPredicted RBP11.16□□□□□ -0.62
MUC1-223ENST00000611571 BPTFQ12830 3046 aa11.16□□□□□ -0.62
MUC1-223ENST00000611571 PVRIGQ6DKI7 326 aa11.16□□□□□ -0.62
MUC1-223ENST00000611571 C20orf144Q9BQM9 153 aa11.16□□□□□ -0.62
MUC1-223ENST00000611571 ST20Q9HBF5 79 aa11.16□□□□□ -0.62
MUC1-223ENST00000611571 NDUFA4L2Q9NRX3 87 aa11.16□□□□□ -0.62
MUC1-223ENST00000611571 ADAMTS9Q9P2N4 1935 aa11.16□□□□□ -0.62
MUC1-223ENST00000611571 KIAA1549LQ6ZVL6 1849 aa11.16□□□□□ -0.62
MUC1-223ENST00000611571 C5orf30Q96GV9 206 aa11.16□□□□□ -0.62
MUC1-223ENST00000611571 KIR2DL4Q99706 377 aa11.16□□□□□ -0.62
MUC1-223ENST00000611571 ARHGAP32A7KAX9 2087 aa11.15□□□□□ -0.62
MUC1-223ENST00000611571 E7EQL1 145 aa11.15□□□□□ -0.62
MUC1-223ENST00000611571 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.15□□□□□ -0.62
MUC1-223ENST00000611571 LYRM7Q5U5X0 104 aa11.15□□□□□ -0.62
MUC1-223ENST00000611571 BRD3OSQ6XYD6 125 aa11.15□□□□□ -0.62
MUC1-223ENST00000611571 ATP5L2Q7Z4Y8 100 aa11.15□□□□□ -0.62
MUC1-223ENST00000611571 DYNLRB2Q8TF09 96 aa11.15□□□□□ -0.62
MUC1-223ENST00000611571 TRGV9Q99603 122 aa11.15□□□□□ -0.62
MUC1-223ENST00000611571 LY96Q9Y6Y9 160 aa11.15□□□□□ -0.62
MUC1-223ENST00000611571 BUB1B-PAK6H3BSN5 160 aa11.15□□□□□ -0.62
MUC1-223ENST00000611571 ERCC8Q13216 396 aa11.15□□□□□ -0.62
MUC1-223ENST00000611571 Q6AWC8 147 aa11.15□□□□□ -0.62
MUC1-223ENST00000611571 ORAOV1Q8WV07 137 aa11.15□□□□□ -0.62
MUC1-223ENST00000611571 IGLV2-14P01704 120 aa11.15□□□□□ -0.63
MUC1-223ENST00000611571 EMP1P54849 157 aa11.15□□□□□ -0.63
MUC1-223ENST00000611571 UTF1Q5T230 341 aa11.15□□□□□ -0.63
MUC1-223ENST00000611571 ODF3L1Q8IXM7 274 aa11.15□□□□□ -0.63
MUC1-223ENST00000611571 CHCHD1Q96BP2 118 aaKnown RBP11.15□□□□□ -0.63
MUC1-223ENST00000611571 SLC25A2Q9BXI2 301 aa11.15□□□□□ -0.63
MUC1-223ENST00000611571 IGHV3-64A0A075B6Q5 118 aa11.14□□□□□ -0.63
MUC1-223ENST00000611571 K7EM74 188 aa11.14□□□□□ -0.63
MUC1-223ENST00000611571 PRSS57Q6UWY2 283 aa11.14□□□□□ -0.63
MUC1-223ENST00000611571 C17orf77Q96MU5 243 aa11.14□□□□□ -0.63
MUC1-223ENST00000611571 FAM106AQ4KMX7 169 aa11.14□□□□□ -0.63
MUC1-223ENST00000611571 CD300EQ496F6 205 aaPredicted RBP11.14□□□□□ -0.63
MUC1-223ENST00000611571 SMIM12Q96EX1 92 aa11.14□□□□□ -0.63
MUC1-223ENST00000611571 C7orf69Q9H7B7 122 aa11.14□□□□□ -0.63
MUC1-223ENST00000611571 JMJD1CQ15652 2540 aa11.14□□□□□ -0.63
MUC1-223ENST00000611571 IGKV3D-20A0A0C4DH25 116 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 TMEM238LA0A1B0GVL6 79 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 A6NJY4 79 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 SH2D1AO60880 128 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 LGALS3P17931 250 aaKnown RBP11.13□□□□□ -0.63
MUC1-223ENST00000611571 ASIPP42127 132 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 PRR20EP86478 221 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 PRR20CP86479 221 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 PRR20DP86480 221 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 PRR20BP86481 221 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 PRR20AP86496 221 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 Q6ZS92 163 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 BCL6BQ8N143 479 aaPredicted RBP11.13□□□□□ -0.63
MUC1-223ENST00000611571 A0A1W2PNU3 283 aaPredicted RBP11.13□□□□□ -0.63
MUC1-223ENST00000611571 CEACAM4O75871 244 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 ATP5LO75964 103 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 UBE2V1Q13404 147 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 MTURNQ8N3F0 131 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 RNF182Q8N6D2 247 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 C8orf49Q96NF6 230 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 TPTE2P1Q5T6R2 138 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 Q86TA4 180 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 FAM215AQ9Y5M1 114 aa11.13□□□□□ -0.63
MUC1-223ENST00000611571 MRPL27Q9P0M9 148 aaKnown RBP11.13□□□□□ -0.63
MUC1-223ENST00000611571 IGLV3-9A0A075B6K5 115 aa11.12□□□□□ -0.63
MUC1-223ENST00000611571 RAB9AP51151 201 aa11.12□□□□□ -0.63
MUC1-223ENST00000611571 TMEM75Q8N9X5 138 aa11.12□□□□□ -0.63
MUC1-223ENST00000611571 HAX1O00165 279 aa11.12□□□□□ -0.63
MUC1-223ENST00000611571 TOMM40O96008 361 aa11.12□□□□□ -0.63
MUC1-223ENST00000611571 C5orf64Q2M2E5 130 aa11.12□□□□□ -0.63
MUC1-223ENST00000611571 ZC2HC1BQ5TFG8 222 aa11.12□□□□□ -0.63
MUC1-223ENST00000611571 Q8TCH9 128 aa11.12□□□□□ -0.63
MUC1-223ENST00000611571 A0A0U1RRA0 63 aa11.12□□□□□ -0.63
MUC1-223ENST00000611571 CD7P09564 240 aa11.12□□□□□ -0.63
MUC1-223ENST00000611571 Q5PR19 223 aa11.12□□□□□ -0.63
MUC1-223ENST00000611571 PYGO2Q9BRQ0 406 aa11.12□□□□□ -0.63
MUC1-223ENST00000611571 VMO1Q7Z5L0 202 aa11.11□□□□□ -0.63
MUC1-223ENST00000611571 TRIOO75962 3097 aa11.11□□□□□ -0.63
MUC1-223ENST00000611571 ABCA12Q86UK0 2595 aa11.11□□□□□ -0.63
MUC1-223ENST00000611571 LOXP28300 417 aaPredicted RBP11.11□□□□□ -0.63
MUC1-223ENST00000611571 Q6ZSR3 168 aa11.11□□□□□ -0.63
MUC1-223ENST00000611571 C11orf44Q8N8P7 122 aa11.11□□□□□ -0.63
MUC1-223ENST00000611571 DDB2Q92466 427 aa11.11□□□□□ -0.63
MUC1-223ENST00000611571 ZFYVE26Q68DK2 2539 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms