RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 CHCHD1Q96BP2 118 aaKnown RBP0.04□□□□□ -2.4
SNORA28-201ENST00000606769 MUCL1Q96DR8 90 aa0.04□□□□□ -2.4
SNORA28-201ENST00000606769 HYLS1Q96M11 299 aa0.04□□□□□ -2.4
SNORA28-201ENST00000606769 PAIP2Q9BPZ3 127 aaKnown RBP0.04□□□□□ -2.4
SNORA28-201ENST00000606769 LIMD2Q9BT23 127 aa0.04□□□□□ -2.4
SNORA28-201ENST00000606769 FAM103A1Q9BTL3 118 aaKnown RBP0.04□□□□□ -2.4
SNORA28-201ENST00000606769 PBOV1Q9GZY1 135 aa0.04□□□□□ -2.4
SNORA28-201ENST00000606769 WFDC10AQ9H1F0 79 aa0.04□□□□□ -2.4
SNORA28-201ENST00000606769 POPDC3Q9HBV1 291 aa0.04□□□□□ -2.4
SNORA28-201ENST00000606769 ARL2BPQ9Y2Y0 163 aa0.04□□□□□ -2.4
SNORA28-201ENST00000606769 FANCMQ8IYD8 2048 aa0.04□□□□□ -2.4
SNORA28-201ENST00000606769 NAV3Q8IVL0 2385 aa0.04□□□□□ -2.4
SNORA28-201ENST00000606769 MEGF8Q7Z7M0 2845 aa0.04□□□□□ -2.4
SNORA28-201ENST00000606769 UBR2Q8IWV8 1755 aa0.04□□□□□ -2.4
SNORA28-201ENST00000606769 APCP25054 2843 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 TRAV27A0A087WT01 109 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 DUXBA0A1W2PPF3 345 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 C17orf112F2Z3M2 114 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 H3BRM9 83 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 BANF1O75531 89 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 OR10J4P0C629 311 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 IDO1P14902 403 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 RAB5CP51148 216 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 TMBIM6P55061 237 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 FXYD4P59646 89 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 KLRD1Q13241 179 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 EIF3IQ13347 325 aaKnown RBP0.03□□□□□ -2.4
SNORA28-201ENST00000606769 HACD4Q5VWC8 232 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 ZCCHC23Q6ZST2 131 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 PHF5AQ7RTV0 110 aaKnown RBP0.03□□□□□ -2.4
SNORA28-201ENST00000606769 LINC00269Q8N2A0 174 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 TMEM138Q9NPI0 162 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 PYCARDQ9ULZ3 195 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 ARL5AQ9Y689 179 aa0.03□□□□□ -2.4
SNORA28-201ENST00000606769 MYLKQ15746 1914 aa0.03□□□□□ -2.41
SNORA28-201ENST00000606769 FAT4Q6V0I7 4981 aa0.03□□□□□ -2.41
SNORA28-201ENST00000606769 CHD3Q12873 2000 aaKnown RBP0.03□□□□□ -2.41
SNORA28-201ENST00000606769 USP24Q9UPU5 2620 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 CTTNBP2Q8WZ74 1663 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 SYNE1Q8NF91 8797 aaKnown RBP0.02□□□□□ -2.41
SNORA28-201ENST00000606769 ZDBF2Q9HCK1 2354 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 IGLV3-32A0A0A0MS00 114 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 hDV103S1A0JD37 113 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 RER1O15258 196 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 MYL5Q02045 173 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 MIR22HGQ0VDD5 57 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 SPA17Q15506 151 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 SNCBQ16143 134 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 LTC4SQ16873 150 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 SPINK9Q5DT21 86 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 FOXI2Q6ZQN5 318 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 LYG2Q86SG7 212 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 TEN1Q86WV5 123 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 ATOH7Q8N100 152 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 SMIM20Q8N5G0 67 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 OR10AG1Q8NH19 301 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 OR4K15Q8NH41 348 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 GINS3Q9BRX5 216 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 SH3BGRL3Q9H299 93 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 CACYBPQ9HB71 228 aaKnown RBP0.02□□□□□ -2.41
SNORA28-201ENST00000606769 OTORQ9NRC9 128 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 OR52A1Q9UKL2 312 aa0.02□□□□□ -2.41
SNORA28-201ENST00000606769 TRAV23DV6A0A075B6W5 121 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 NUPR2A6NF83 97 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 H7BYZ3 331 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 H7C1C5 153 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 ATP5HO75947 161 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 ATG12O94817 140 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 NDUFC2O95298 119 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 IGHV3-33P01772 117 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 PHBP35232 272 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 ARF6P62330 175 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 LCN6P62502 163 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 GNG3P63215 75 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 ASB16-AS1Q495Z4 193 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 SPATA45Q537H7 98 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 C1orf140Q5VVS0 124 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 CCL4L1Q8NHW4 92 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 PLAC4Q8WY50 150 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 MALSU1Q96EH3 234 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 CHMP6Q96FZ7 201 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 PHB2Q99623 299 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 HOPXQ9BPY8 73 aaPredicted RBP0.01□□□□□ -2.41
SNORA28-201ENST00000606769 OR2J1Q9GZK6 312 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 LYRM2Q9NU23 88 aaPredicted RBP0.01□□□□□ -2.41
SNORA28-201ENST00000606769 PLAC8Q9NZF1 115 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 EIF3AQ14152 1382 aaKnown RBP0.01□□□□□ -2.41
SNORA28-201ENST00000606769 UHRF1BP1Q6BDS2 1440 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 ASH1LQ9NR48 2969 aaKnown RBP0.01□□□□□ -2.41
SNORA28-201ENST00000606769 KCPQ6ZWJ8 1503 aa0.01□□□□□ -2.41
SNORA28-201ENST00000606769 TRAV5A0A0B4J249 113 aa0□□□□□ -2.41
SNORA28-201ENST00000606769 RIIAD1A6NNX1 92 aa0□□□□□ -2.41
SNORA28-201ENST00000606769 G3V2T6 193 aa0□□□□□ -2.41
SNORA28-201ENST00000606769 HIST1H2BKO60814 126 aa0□□□□□ -2.41
SNORA28-201ENST00000606769 CST7O76096 145 aa0□□□□□ -2.41
SNORA28-201ENST00000606769 IFNA1P01562 189 aa0□□□□□ -2.41
SNORA28-201ENST00000606769 HIST1H2BJP06899 126 aa0□□□□□ -2.41
SNORA28-201ENST00000606769 OGNP20774 298 aaKnown RBP0□□□□□ -2.41
SNORA28-201ENST00000606769 PTPRDP23468 1912 aa0□□□□□ -2.41
SNORA28-201ENST00000606769 GLRXP35754 106 aa0□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms