RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 C7orf77A4D0Y5 90 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 B4DEV8 164 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 NDUFA4O00483 81 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 IL4P05112 153 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 CTSGP08311 255 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 GP9P14770 177 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 S100A7P31151 101 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 SYNJ2BPP57105 145 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 KLF5Q13887 457 aaPredicted RBP7.7□□□□□ -1.18
UPF1-213ENST00000601981 ZNF600Q6ZNG1 722 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 REC114Q7Z4M0 266 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 OR9G4Q8NGQ1 327 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 RPUSD4Q96CM3 377 aaKnown RBP7.7□□□□□ -1.18
UPF1-213ENST00000601981 FXYD5Q96DB9 178 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 TCEAL7Q9BRU2 100 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 SHANK2-AS3Q9BTD1 123 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 SDF2L1Q9HCN8 221 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 NAT8Q9UHE5 227 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 RNF24Q9Y225 148 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 UFC1Q9Y3C8 167 aa7.7□□□□□ -1.18
UPF1-213ENST00000601981 A0A087WWC5 75 aa7.69□□□□□ -1.18
UPF1-213ENST00000601981 SCO2A0A1W2PP80 73 aa7.69□□□□□ -1.18
UPF1-213ENST00000601981 ZNF320A2RRD8 509 aa7.69□□□□□ -1.18
UPF1-213ENST00000601981 LGALS9O00182 355 aa7.69□□□□□ -1.18
UPF1-213ENST00000601981 SAP30O75446 220 aa7.69□□□□□ -1.18
UPF1-213ENST00000601981 OR10J4P0C629 311 aa7.69□□□□□ -1.18
UPF1-213ENST00000601981 PYYP10082 97 aa7.69□□□□□ -1.18
UPF1-213ENST00000601981 NPPCP23582 126 aa7.69□□□□□ -1.18
UPF1-213ENST00000601981 BMI1P35226 326 aa7.69□□□□□ -1.18
UPF1-213ENST00000601981 ADMP35318 185 aa7.69□□□□□ -1.18
UPF1-213ENST00000601981 ZNF674Q2M3X9 581 aa7.69□□□□□ -1.18
UPF1-213ENST00000601981 CHRDL1Q9BU40 450 aa7.69□□□□□ -1.18
UPF1-213ENST00000601981 C20orf24Q9BUV8 137 aa7.69□□□□□ -1.18
UPF1-213ENST00000601981 RPS10P5Q9NQ39 176 aa7.69□□□□□ -1.18
UPF1-213ENST00000601981 SMCO4Q9NRQ5 59 aa7.69□□□□□ -1.18
UPF1-213ENST00000601981 MGAM2Q2M2H8 2515 aa7.68□□□□□ -1.18
UPF1-213ENST00000601981 A8MWP6 167 aa7.68□□□□□ -1.18
UPF1-213ENST00000601981 GGTLC3B5MD39 225 aa7.68□□□□□ -1.18
UPF1-213ENST00000601981 NDUFB4O95168 129 aa7.68□□□□□ -1.18
UPF1-213ENST00000601981 IGLL1P15814 213 aa7.68□□□□□ -1.18
UPF1-213ENST00000601981 USF2Q15853 346 aaPredicted RBP7.68□□□□□ -1.18
UPF1-213ENST00000601981 TMEM241Q24JQ0 296 aa7.68□□□□□ -1.18
UPF1-213ENST00000601981 CBLN2Q8IUK8 224 aa7.68□□□□□ -1.18
UPF1-213ENST00000601981 DAZ1Q9NQZ3 744 aaKnown RBP7.68□□□□□ -1.18
UPF1-213ENST00000601981 SORL1Q92673 2214 aa7.67□□□□□ -1.18
UPF1-213ENST00000601981 IGHV3-35A0A0C4DH35 117 aa7.67□□□□□ -1.18
UPF1-213ENST00000601981 ZNF98A6NK75 572 aa7.67□□□□□ -1.18
UPF1-213ENST00000601981 WIPF1O43516 503 aa7.67□□□□□ -1.18
UPF1-213ENST00000601981 NBEAP1P0C6P0 100 aa7.67□□□□□ -1.18
UPF1-213ENST00000601981 HIST1H1EP10412 219 aaKnown RBP7.67□□□□□ -1.18
UPF1-213ENST00000601981 TMEM88Q6PEY1 159 aa7.67□□□□□ -1.18
UPF1-213ENST00000601981 BPIFA4PQ86YQ2 179 aa7.67□□□□□ -1.18
UPF1-213ENST00000601981 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.67□□□□□ -1.18
UPF1-213ENST00000601981 DYNLRB2Q8TF09 96 aa7.67□□□□□ -1.18
UPF1-213ENST00000601981 ZNF414Q96IQ9 312 aa7.67□□□□□ -1.18
UPF1-213ENST00000601981 TUBA4BQ9H853 241 aa7.67□□□□□ -1.18
UPF1-213ENST00000601981 ZFAND3Q9H8U3 227 aa7.67□□□□□ -1.18
UPF1-213ENST00000601981 SIGLEC8Q9NYZ4 499 aa7.67□□□□□ -1.18
UPF1-213ENST00000601981 RABAC1Q9UI14 185 aa7.67□□□□□ -1.18
UPF1-213ENST00000601981 PRELID1Q9Y255 219 aa7.67□□□□□ -1.18
UPF1-213ENST00000601981 CMYA5Q8N3K9 4069 aa7.66□□□□□ -1.18
UPF1-213ENST00000601981 C2orf70A6NJV1 201 aa7.66□□□□□ -1.18
UPF1-213ENST00000601981 C9JCJ5 164 aa7.66□□□□□ -1.18
UPF1-213ENST00000601981 K7EMT4 169 aa7.66□□□□□ -1.18
UPF1-213ENST00000601981 TSPAN4O14817 238 aa7.66□□□□□ -1.18
UPF1-213ENST00000601981 MRPS12O15235 138 aaKnown RBP7.66□□□□□ -1.18
UPF1-213ENST00000601981 RPL23P62829 140 aaKnown RBP7.66□□□□□ -1.18
UPF1-213ENST00000601981 SUMO1P63165 101 aaKnown RBP7.66□□□□□ -1.18
UPF1-213ENST00000601981 ADIRFQ15847 76 aa7.66□□□□□ -1.18
UPF1-213ENST00000601981 SAMD5Q5TGI4 173 aa7.66□□□□□ -1.18
UPF1-213ENST00000601981 LEMD1Q68G75 181 aa7.66□□□□□ -1.18
UPF1-213ENST00000601981 TOMM20LQ6UXN7 152 aa7.66□□□□□ -1.18
UPF1-213ENST00000601981 C2CD4CQ8TF44 421 aa7.66□□□□□ -1.18
UPF1-213ENST00000601981 CTDSP1Q9GZU7 261 aa7.66□□□□□ -1.18
UPF1-213ENST00000601981 LY96Q9Y6Y9 160 aa7.66□□□□□ -1.18
UPF1-213ENST00000601981 CXorf65A6NEN9 183 aa7.65□□□□□ -1.18
UPF1-213ENST00000601981 IGLC2P0DOY2 106 aa7.65□□□□□ -1.18
UPF1-213ENST00000601981 CRYBB3P26998 211 aa7.65□□□□□ -1.18
UPF1-213ENST00000601981 AKR1C3P42330 323 aa7.65□□□□□ -1.18
UPF1-213ENST00000601981 OXLD1Q5BKU9 147 aa7.65□□□□□ -1.18
UPF1-213ENST00000601981 UNQ9165/PRO28630Q6UXU0 137 aa7.65□□□□□ -1.18
UPF1-213ENST00000601981 LINC01551Q86U37 167 aa7.65□□□□□ -1.18
UPF1-213ENST00000601981 C15orf54Q8N8G6 183 aa7.65□□□□□ -1.18
UPF1-213ENST00000601981 OR2K2Q8NGT1 345 aa7.65□□□□□ -1.18
UPF1-213ENST00000601981 BLNKQ8WV28 456 aa7.65□□□□□ -1.18
UPF1-213ENST00000601981 HIST1H2BAQ96A08 127 aa7.65□□□□□ -1.18
UPF1-213ENST00000601981 METTL26Q96S19 204 aa7.65□□□□□ -1.18
UPF1-213ENST00000601981 DERL1Q9BUN8 251 aa7.65□□□□□ -1.18
UPF1-213ENST00000601981 OTORQ9NRC9 128 aa7.65□□□□□ -1.18
UPF1-213ENST00000601981 TMEM242Q9NWH2 141 aa7.65□□□□□ -1.18
UPF1-213ENST00000601981 TRBV19A0A075B6N1 114 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 A0A1W2PS18 150 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 TMEM213A2RRL7 107 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 G3V4G9 280 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 PEX7O00628 323 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 MT-ND4LP03901 98 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 CSN3P07498 182 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 FOLR2P14207 255 aa7.64□□□□□ -1.19
UPF1-213ENST00000601981 RPL7P18124 248 aaKnown RBP7.64□□□□□ -1.19
UPF1-213ENST00000601981 CBLN1P23435 193 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms