RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, human

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SSBP4-211	ENST00000601614	CCDC28A	Q8IWP9	274 aa		10.82	□□□□□ -0.68
SSBP4-211	ENST00000601614	RPUSD4	Q96CM3	377 aa	Known RBP	10.82	□□□□□ -0.68
SSBP4-211	ENST00000601614	EXTL2	Q9UBQ6	330 aa		10.82	□□□□□ -0.68
SSBP4-211	ENST00000601614	PAIP2B	Q9ULR5	123 aa	Known RBP	10.82	□□□□□ -0.68
SSBP4-211	ENST00000601614		A0A087X0K7	114 aa		10.81	□□□□□ -0.68
SSBP4-211	ENST00000601614		A0A0B4J2A0	478 aa		10.81	□□□□□ -0.68
SSBP4-211	ENST00000601614	DAZ2	Q13117	558 aa	Known RBP	10.81	□□□□□ -0.68
SSBP4-211	ENST00000601614	SERTAD4-AS1	Q5TG53	156 aa		10.81	□□□□□ -0.68
SSBP4-211	ENST00000601614	OR1S1	Q8NH92	325 aa		10.81	□□□□□ -0.68
SSBP4-211	ENST00000601614	SHPK	Q9UHJ6	478 aa		10.81	□□□□□ -0.68
SSBP4-211	ENST00000601614	PRAC2	D3DTV9	90 aa		10.8	□□□□□ -0.68
SSBP4-211	ENST00000601614	MRPS12	O15235	138 aa	Known RBP	10.8	□□□□□ -0.68
SSBP4-211	ENST00000601614	PITX3	O75364	302 aa		10.8	□□□□□ -0.68
SSBP4-211	ENST00000601614	RPL7	P18124	248 aa	Known RBP	10.8	□□□□□ -0.68
SSBP4-211	ENST00000601614	VBP1	P61758	197 aa		10.8	□□□□□ -0.68
SSBP4-211	ENST00000601614	RAB11A	P62491	216 aa		10.8	□□□□□ -0.68
SSBP4-211	ENST00000601614		J3KRW8	73 aa		10.79	□□□□□ -0.68
SSBP4-211	ENST00000601614	SNRPC	P09234	159 aa	Known RBP	10.79	□□□□□ -0.68
SSBP4-211	ENST00000601614	LYPD5	Q6UWN5	251 aa		10.79	□□□□□ -0.68
SSBP4-211	ENST00000601614	MSRB1	Q9NZV6	116 aa		10.79	□□□□□ -0.68
SSBP4-211	ENST00000601614	FAT3	Q8TDW7	4589 aa		10.78	□□□□□ -0.68
SSBP4-211	ENST00000601614	TRGV2	A0A075B6R0	118 aa		10.78	□□□□□ -0.68
SSBP4-211	ENST00000601614	IGLV5-52	A0A0A0MRZ9	124 aa		10.78	□□□□□ -0.68
SSBP4-211	ENST00000601614	LINC00854	A0A1B0GVQ3	168 aa		10.78	□□□□□ -0.68
SSBP4-211	ENST00000601614	ZNF324	O75467	553 aa	Predicted RBP	10.78	□□□□□ -0.68
SSBP4-211	ENST00000601614	CCDC190	Q86UF4	302 aa		10.78	□□□□□ -0.68
SSBP4-211	ENST00000601614	C11orf72	Q8NBR9	251 aa		10.78	□□□□□ -0.68
SSBP4-211	ENST00000601614	LINC00467	Q9BRT7	94 aa		10.78	□□□□□ -0.68
SSBP4-211	ENST00000601614	GSN-AS1	Q9NRJ2	163 aa		10.78	□□□□□ -0.68
SSBP4-211	ENST00000601614	HIGD1A	Q9Y241	93 aa		10.78	□□□□□ -0.68
SSBP4-211	ENST00000601614	KCNIP3	Q9Y2W7	256 aa		10.78	□□□□□ -0.68
SSBP4-211	ENST00000601614	ICOS	Q9Y6W8	199 aa		10.78	□□□□□ -0.68
SSBP4-211	ENST00000601614	TRAV12-3	A0A0B4J271	114 aa		10.77	□□□□□ -0.69
SSBP4-211	ENST00000601614	LRCOL1	A6NCL2	159 aa		10.77	□□□□□ -0.69
SSBP4-211	ENST00000601614	PMS2P5	A8MQ11	134 aa		10.77	□□□□□ -0.69
SSBP4-211	ENST00000601614	DISC1	C4P0D8	188 aa		10.77	□□□□□ -0.69
SSBP4-211	ENST00000601614	AKR1C4	P17516	323 aa		10.77	□□□□□ -0.69
SSBP4-211	ENST00000601614	AKR1C1	Q04828	323 aa		10.77	□□□□□ -0.69
SSBP4-211	ENST00000601614	ACOT7L	Q6ZUV0	252 aa		10.77	□□□□□ -0.69
SSBP4-211	ENST00000601614	WFDC10B	Q8IUB3	73 aa		10.77	□□□□□ -0.69
SSBP4-211	ENST00000601614	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.77	□□□□□ -0.69
SSBP4-211	ENST00000601614	SYT8	Q8NBV8	401 aa		10.77	□□□□□ -0.69
SSBP4-211	ENST00000601614	OR51S1	Q8NGJ8	323 aa		10.77	□□□□□ -0.69
SSBP4-211	ENST00000601614		Q9H521	79 aa		10.77	□□□□□ -0.69
SSBP4-211	ENST00000601614	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.77	□□□□□ -0.69
SSBP4-211	ENST00000601614	FUT9	Q9Y231	359 aa		10.77	□□□□□ -0.69
SSBP4-211	ENST00000601614	LY96	Q9Y6Y9	160 aa		10.77	□□□□□ -0.69
SSBP4-211	ENST00000601614	PAX4	O43316	350 aa		10.76	□□□□□ -0.69
SSBP4-211	ENST00000601614	RAP2B	P61225	183 aa		10.76	□□□□□ -0.69
SSBP4-211	ENST00000601614	PATE2	Q6UY27	113 aa		10.76	□□□□□ -0.69
SSBP4-211	ENST00000601614	CYP2G1P	Q6ZSU1	146 aa		10.76	□□□□□ -0.69
SSBP4-211	ENST00000601614	LRRC20	Q8TCA0	184 aa		10.76	□□□□□ -0.69
SSBP4-211	ENST00000601614	TRGV1	A0A0A0MS02	117 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	NPIPB6	E9PJ23	425 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	SLC17A3	O00476	420 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	HYPM	O75409	117 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	IGHV3-53	P01767	116 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	IL5	P05113	134 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	OR5G3	P0C626	314 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	LINC00869	P0C866	280 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	CT45A10	P0DMU9	189 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	S100A7	P31151	101 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	PLP1	P60201	277 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	MZT2A	Q6P582	158 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	ZNF431	Q8TF32	576 aa	Predicted RBP	10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	PYGO2	Q9BRQ0	406 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	FUNDC2	Q9BWH2	189 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	MIXL1	Q9H2W2	232 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	KLF12	Q9Y4X4	402 aa		10.75	□□□□□ -0.69
SSBP4-211	ENST00000601614	TRAV9-2	A0A087WT02	112 aa		10.74	□□□□□ -0.69
SSBP4-211	ENST00000601614		H3BP45	60 aa		10.74	□□□□□ -0.69
SSBP4-211	ENST00000601614		H3BTX0	84 aa		10.74	□□□□□ -0.69
SSBP4-211	ENST00000601614	WRB	O00258	174 aa		10.74	□□□□□ -0.69
SSBP4-211	ENST00000601614	PLA2G1B	P04054	148 aa	Known RBP	10.74	□□□□□ -0.69
SSBP4-211	ENST00000601614	AKAIN1	P0CW23	69 aa		10.74	□□□□□ -0.69
SSBP4-211	ENST00000601614	SSBP1	Q04837	148 aa	Known RBP	10.74	□□□□□ -0.69
SSBP4-211	ENST00000601614	LINC00528	Q8N1L1	170 aa		10.74	□□□□□ -0.69
SSBP4-211	ENST00000601614	DEFB104A	Q8WTQ1	72 aa		10.74	□□□□□ -0.69
SSBP4-211	ENST00000601614	PLA2G2D	Q9UNK4	145 aa		10.74	□□□□□ -0.69
SSBP4-211	ENST00000601614	PRAF2	O60831	178 aa		10.73	□□□□□ -0.69
SSBP4-211	ENST00000601614	CRYBA4	P53673	196 aa		10.73	□□□□□ -0.69
SSBP4-211	ENST00000601614	SPANXN5	Q5MJ07	72 aa		10.73	□□□□□ -0.69
SSBP4-211	ENST00000601614	TEPP	Q6URK8	271 aa		10.73	□□□□□ -0.69
SSBP4-211	ENST00000601614	NTN5	Q8WTR8	489 aa	Predicted RBP	10.73	□□□□□ -0.69
SSBP4-211	ENST00000601614	PRRT1	Q99946	306 aa		10.73	□□□□□ -0.69
SSBP4-211	ENST00000601614	SPINK4	O60575	86 aa		10.72	□□□□□ -0.69
SSBP4-211	ENST00000601614	CXCL2	P19875	107 aa		10.72	□□□□□ -0.69
SSBP4-211	ENST00000601614	LCN15	Q6UWW0	184 aa		10.72	□□□□□ -0.69
SSBP4-211	ENST00000601614	CLVS1	Q8IUQ0	354 aa	Predicted RBP	10.72	□□□□□ -0.69
SSBP4-211	ENST00000601614	SMIM4	Q8WVI0	70 aa		10.72	□□□□□ -0.69
SSBP4-211	ENST00000601614	ST6GAL2	Q96JF0	529 aa		10.72	□□□□□ -0.69
SSBP4-211	ENST00000601614	SLC50A1	Q9BRV3	221 aa		10.72	□□□□□ -0.69
SSBP4-211	ENST00000601614	SMCO3	A2RU48	225 aa		10.71	□□□□□ -0.69
SSBP4-211	ENST00000601614	SYNGR2	O43760	224 aa		10.71	□□□□□ -0.69
SSBP4-211	ENST00000601614	ANXA7	P20073	488 aa	Known RBP	10.71	□□□□□ -0.69
SSBP4-211	ENST00000601614	FHL2	Q14192	279 aa		10.71	□□□□□ -0.69
SSBP4-211	ENST00000601614	MRPL23	Q16540	153 aa	Known RBP	10.71	□□□□□ -0.69
SSBP4-211	ENST00000601614	NEGR1	Q7Z3B1	354 aa		10.71	□□□□□ -0.69
SSBP4-211	ENST00000601614	C15orf40	Q8WUR7	153 aa		10.71	□□□□□ -0.69
SSBP4-211	ENST00000601614	C8orf49	Q96NF6	230 aa		10.71	□□□□□ -0.69

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