RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 RD3LP0DJH9 198 aa9.14□□□□□ -0.95
VRK3-223ENST00000601341 PYYP10082 97 aa9.14□□□□□ -0.95
VRK3-223ENST00000601341 MGST1P10620 155 aaKnown RBP9.14□□□□□ -0.95
VRK3-223ENST00000601341 UNQ5815/PRO19632Q6UWF5 114 aa9.14□□□□□ -0.95
VRK3-223ENST00000601341 C19orf35Q6ZS72 473 aa9.14□□□□□ -0.95
VRK3-223ENST00000601341 S100A7AQ86SG5 101 aa9.14□□□□□ -0.95
VRK3-223ENST00000601341 MISP3Q96FF7 219 aa9.14□□□□□ -0.95
VRK3-223ENST00000601341 GPR82Q96P67 336 aa9.14□□□□□ -0.95
VRK3-223ENST00000601341 ATG101Q9BSB4 218 aa9.14□□□□□ -0.95
VRK3-223ENST00000601341 MRPL36Q9P0J6 103 aaKnown RBP9.14□□□□□ -0.95
VRK3-223ENST00000601341 KIR2DL5BA0A0G2JN68 375 aa9.13□□□□□ -0.95
VRK3-223ENST00000601341 KIR2DL5BA0A0G2JPC4 375 aa9.13□□□□□ -0.95
VRK3-223ENST00000601341 TRBV6-1A0A0K0K1D8 114 aa9.13□□□□□ -0.95
VRK3-223ENST00000601341 FAM231BA6NCW3 169 aa9.13□□□□□ -0.95
VRK3-223ENST00000601341 LINC01548A6NM66 108 aa9.13□□□□□ -0.95
VRK3-223ENST00000601341 IGF1P05019 195 aa9.13□□□□□ -0.95
VRK3-223ENST00000601341 GP9P14770 177 aa9.13□□□□□ -0.95
VRK3-223ENST00000601341 SRD5A1P18405 259 aa9.13□□□□□ -0.95
VRK3-223ENST00000601341 CRIP2P52943 208 aaPredicted RBP9.13□□□□□ -0.95
VRK3-223ENST00000601341 LINC00310P59036 64 aa9.13□□□□□ -0.95
VRK3-223ENST00000601341 USF2Q15853 346 aaPredicted RBP9.13□□□□□ -0.95
VRK3-223ENST00000601341 ECSCRQ19T08 205 aa9.13□□□□□ -0.95
VRK3-223ENST00000601341 BAGE3Q86Y29 109 aa9.13□□□□□ -0.95
VRK3-223ENST00000601341 KIR2DL5AQ8N109 375 aa9.13□□□□□ -0.95
VRK3-223ENST00000601341 FAM110DQ8TAY7 271 aaPredicted RBP9.13□□□□□ -0.95
VRK3-223ENST00000601341 TSKUQ8WUA8 353 aa9.13□□□□□ -0.95
VRK3-223ENST00000601341 MLST8Q9BVC4 326 aa9.13□□□□□ -0.95
VRK3-223ENST00000601341 ZNF331Q9NQX6 463 aaPredicted RBP9.13□□□□□ -0.95
VRK3-223ENST00000601341 MRPL27Q9P0M9 148 aaKnown RBP9.13□□□□□ -0.95
VRK3-223ENST00000601341 ZNF492Q9P255 531 aa9.13□□□□□ -0.95
VRK3-223ENST00000601341 TRAV41A0A0B4J266 112 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 I3L2K1 104 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 SERF1AO75920 110 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 TOMM40O96008 361 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 IGLC1P0CG04 106 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 UBE2G1P62253 170 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 OR1B1Q8NGR6 318 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 C2orf88Q9BSF0 95 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 NPFFR1Q9GZQ6 430 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 GFRA4Q9GZZ7 299 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 THYN1Q9P016 225 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 HIGD1AQ9Y241 93 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 ZFHX3Q15911 3703 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 GRIFINA4D1Z8 144 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 G3V318 75 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 NUPR1O60356 82 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 SCGB1D1O95968 90 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 ORM2P19652 201 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 DMRTA1Q5VZB9 504 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 TEX43Q6ZNM6 134 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 LYPD1Q8N2G4 141 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 PRSS22Q9GZN4 317 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 PRO1933Q9H354 126 aa9.12□□□□□ -0.95
VRK3-223ENST00000601341 IGLV11-55A0A075B6I3 123 aa9.11□□□□□ -0.95
VRK3-223ENST00000601341 OR2J3O76001 311 aa9.11□□□□□ -0.95
VRK3-223ENST00000601341 LTAP01374 205 aa9.11□□□□□ -0.95
VRK3-223ENST00000601341 APCSP02743 223 aa9.11□□□□□ -0.95
VRK3-223ENST00000601341 SLC25A5P05141 298 aaKnown RBP9.11□□□□□ -0.95
VRK3-223ENST00000601341 GPX1P07203 203 aa9.11□□□□□ -0.95
VRK3-223ENST00000601341 FAM162BQ5T6X4 162 aa9.11□□□□□ -0.95
VRK3-223ENST00000601341 NUDT10Q8NFP7 164 aa9.11□□□□□ -0.95
VRK3-223ENST00000601341 NUDT11Q96G61 164 aa9.11□□□□□ -0.95
VRK3-223ENST00000601341 FANCD2OSQ96PS1 177 aa9.11□□□□□ -0.95
VRK3-223ENST00000601341 GNB4Q9HAV0 340 aa9.11□□□□□ -0.95
VRK3-223ENST00000601341 OTORQ9NRC9 128 aa9.11□□□□□ -0.95
VRK3-223ENST00000601341 SERTAD4Q9NUC0 356 aa9.11□□□□□ -0.95
VRK3-223ENST00000601341 ZNF580Q9UK33 172 aa9.11□□□□□ -0.95
VRK3-223ENST00000601341 TRAV30A0A087WSZ9 112 aa9.1□□□□□ -0.95
VRK3-223ENST00000601341 PGPA6NDG6 321 aa9.1□□□□□ -0.95
VRK3-223ENST00000601341 BMPR1BO00238 502 aa9.1□□□□□ -0.95
VRK3-223ENST00000601341 KLK9Q2XQG4 91 aa9.1□□□□□ -0.95
VRK3-223ENST00000601341 C19orf54Q5BKX5 351 aa9.1□□□□□ -0.95
VRK3-223ENST00000601341 Q6ZS46 218 aa9.1□□□□□ -0.95
VRK3-223ENST00000601341 Q6ZWC4 215 aa9.1□□□□□ -0.95
VRK3-223ENST00000601341 LINC00469Q8N7U9 141 aa9.1□□□□□ -0.95
VRK3-223ENST00000601341 ZNF418Q8TF45 676 aaPredicted RBP9.1□□□□□ -0.95
VRK3-223ENST00000601341 KCNS1Q96KK3 526 aa9.1□□□□□ -0.95
VRK3-223ENST00000601341 DUX5Q96PT3 197 aa9.1□□□□□ -0.95
VRK3-223ENST00000601341 C20orf144Q9BQM9 153 aa9.1□□□□□ -0.95
VRK3-223ENST00000601341 SAMD10Q9BYL1 202 aa9.1□□□□□ -0.95
VRK3-223ENST00000601341 ZNF586Q9NXT0 402 aa9.1□□□□□ -0.95
VRK3-223ENST00000601341 KLK9Q9UKQ9 250 aa9.1□□□□□ -0.95
VRK3-223ENST00000601341 HIVEP1P15822 2718 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 DNAJC9-AS1A6NH13 148 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 A8MWL6 223 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 K7EIM0 57 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 IGHV3-48P01763 117 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 TCRAP04437 139 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 PSG1P11464 419 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 KLF5Q13887 457 aaPredicted RBP9.09□□□□□ -0.95
VRK3-223ENST00000601341 ARL6IP6Q8N6S5 226 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 OR4B1Q8NGF8 309 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 LINC00479Q96M42 142 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 LINC00527Q9UJ94 153 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 MTORP42345 2549 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 IGHV3-21A0A0B4J1V1 117 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 A0A1B0GUS0 222 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 C19orf71A6NCJ1 209 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 ZNF253O75346 499 aa9.09□□□□□ -0.95
VRK3-223ENST00000601341 ZNF600Q6ZNG1 722 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms