RNA–Protein interactions for RNA: ENST00000597641.1

PRKD2-210, Transcript of protein kinase D2, human

TSL 4

Gene PRKD2, Length 456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD2-210	ENST00000597641	CCL18	P55774	89 aa		10.5	□□□□□ -0.73
PRKD2-210	ENST00000597641	B2M	P61769	119 aa		10.5	□□□□□ -0.73
PRKD2-210	ENST00000597641	RRAS2	P62070	204 aa	Predicted RBP	10.5	□□□□□ -0.73
PRKD2-210	ENST00000597641	ID3	Q02535	119 aa		10.5	□□□□□ -0.73
PRKD2-210	ENST00000597641	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	10.5	□□□□□ -0.73
PRKD2-210	ENST00000597641		H3BTX0	84 aa		10.49	□□□□□ -0.73
PRKD2-210	ENST00000597641	OR5G3	P0C626	314 aa		10.49	□□□□□ -0.73
PRKD2-210	ENST00000597641	RPL7	P18124	248 aa	Known RBP	10.49	□□□□□ -0.73
PRKD2-210	ENST00000597641	RPP30	P78346	268 aa	Known RBP	10.49	□□□□□ -0.73
PRKD2-210	ENST00000597641	PYDC2	Q56P42	97 aa		10.49	□□□□□ -0.73
PRKD2-210	ENST00000597641	MORN5	Q5VZ52	161 aa		10.49	□□□□□ -0.73
PRKD2-210	ENST00000597641		Q8N1X5	172 aa		10.49	□□□□□ -0.73
PRKD2-210	ENST00000597641	TOMM5	Q8N4H5	51 aa		10.49	□□□□□ -0.73
PRKD2-210	ENST00000597641	LINC00612	Q8N6U2	182 aa		10.49	□□□□□ -0.73
PRKD2-210	ENST00000597641	MCFD2	Q8NI22	146 aa		10.49	□□□□□ -0.73
PRKD2-210	ENST00000597641	RPUSD4	Q96CM3	377 aa	Known RBP	10.49	□□□□□ -0.73
PRKD2-210	ENST00000597641	C16orf74	Q96GX8	76 aa		10.49	□□□□□ -0.73
PRKD2-210	ENST00000597641		Q9H8V8	135 aa		10.49	□□□□□ -0.73
PRKD2-210	ENST00000597641	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.49	□□□□□ -0.73
PRKD2-210	ENST00000597641	TRAV26-1	A0A087WT03	109 aa		10.48	□□□□□ -0.73
PRKD2-210	ENST00000597641		A0A0J9YY99	117 aa		10.48	□□□□□ -0.73
PRKD2-210	ENST00000597641	SLC17A3	O00476	420 aa		10.48	□□□□□ -0.73
PRKD2-210	ENST00000597641	RAP2B	P61225	183 aa		10.48	□□□□□ -0.73
PRKD2-210	ENST00000597641	SLC38A11	Q08AI6	406 aa		10.48	□□□□□ -0.73
PRKD2-210	ENST00000597641	ARL16	Q0P5N6	197 aa		10.48	□□□□□ -0.73
PRKD2-210	ENST00000597641	ESRG	Q1W209	222 aa		10.48	□□□□□ -0.73
PRKD2-210	ENST00000597641	TMEM256	Q8N2U0	113 aa		10.48	□□□□□ -0.73
PRKD2-210	ENST00000597641	ARL6	Q9H0F7	186 aa		10.48	□□□□□ -0.73
PRKD2-210	ENST00000597641	PSENEN	Q9NZ42	101 aa		10.48	□□□□□ -0.73
PRKD2-210	ENST00000597641	FLVCR2	Q9UPI3	526 aa		10.48	□□□□□ -0.73
PRKD2-210	ENST00000597641	ZNF701	M0R085	212 aa	Predicted RBP	10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	SSSCA1	O60232	199 aa		10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	METTL15P1	P0C7V9	234 aa		10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	FAU	P35544	74 aa	Known RBP	10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	FUS	P35637	526 aa	Known RBP eCLIP	10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	CDKN1B	P46527	198 aa		10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	OR5I1	Q13606	314 aa		10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	GFI1B	Q5VTD9	330 aa		10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	TMEM14EP	Q6UXP3	125 aa		10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	TMEM263	Q8WUH6	116 aa	Known RBP	10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	BCL7B	Q9BQE9	202 aa		10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	SLC25A21	Q9BQT8	299 aa	Predicted RBP	10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	ARV1	Q9H2C2	271 aa		10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	SCRT2	Q9NQ03	307 aa		10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	ZNF331	Q9NQX6	463 aa	Predicted RBP	10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	MYCBP2	O75592	4640 aa		10.47	□□□□□ -0.73
PRKD2-210	ENST00000597641	LINC00854	A0A1B0GVQ3	168 aa		10.46	□□□□□ -0.73
PRKD2-210	ENST00000597641	C9orf170	A2RU37	121 aa		10.46	□□□□□ -0.73
PRKD2-210	ENST00000597641	DLK1	P80370	383 aa		10.46	□□□□□ -0.73
PRKD2-210	ENST00000597641	CLINT1	Q14677	625 aa		10.46	□□□□□ -0.73
PRKD2-210	ENST00000597641	GAGE12B	A1L429	117 aa		10.45	□□□□□ -0.74
PRKD2-210	ENST00000597641	GAGE7	O76087	117 aa		10.45	□□□□□ -0.74
PRKD2-210	ENST00000597641	GAGE12F	P0CL80	117 aa		10.45	□□□□□ -0.74
PRKD2-210	ENST00000597641	GAGE12G	P0CL81	117 aa		10.45	□□□□□ -0.74
PRKD2-210	ENST00000597641	GAGE12I	P0CL82	117 aa		10.45	□□□□□ -0.74
PRKD2-210	ENST00000597641	RXFP4	Q8TDU9	374 aa		10.45	□□□□□ -0.74
PRKD2-210	ENST00000597641	TMEM37	Q8WXS4	190 aa		10.45	□□□□□ -0.74
PRKD2-210	ENST00000597641	GNPNAT1	Q96EK6	184 aa	Predicted RBP	10.45	□□□□□ -0.74
PRKD2-210	ENST00000597641	SMIM8	Q96KF7	97 aa		10.45	□□□□□ -0.74
PRKD2-210	ENST00000597641		Q9H3A6	140 aa		10.45	□□□□□ -0.74
PRKD2-210	ENST00000597641	PPP1R14D	Q9NXH3	145 aa		10.45	□□□□□ -0.74
PRKD2-210	ENST00000597641	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.45	□□□□□ -0.74
PRKD2-210	ENST00000597641	FLG2	Q5D862	2391 aa	Predicted RBP	10.44	□□□□□ -0.74
PRKD2-210	ENST00000597641	PIGBOS1	A0A0B4J2F0	54 aa		10.44	□□□□□ -0.74
PRKD2-210	ENST00000597641		H3BQ15	152 aa		10.44	□□□□□ -0.74
PRKD2-210	ENST00000597641		H7BYZ3	331 aa		10.44	□□□□□ -0.74
PRKD2-210	ENST00000597641		J3KRW8	73 aa		10.44	□□□□□ -0.74
PRKD2-210	ENST00000597641		K7EPK0	472 aa		10.44	□□□□□ -0.74
PRKD2-210	ENST00000597641	ZNF493	Q6ZR52	646 aa		10.44	□□□□□ -0.74
PRKD2-210	ENST00000597641	LRRC20	Q8TCA0	184 aa		10.44	□□□□□ -0.74
PRKD2-210	ENST00000597641	RCL1	Q9Y2P8	373 aa	Known RBP	10.44	□□□□□ -0.74
PRKD2-210	ENST00000597641	CT45A10	P0DMU9	189 aa		10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641	ANXA7	P20073	488 aa	Known RBP	10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641	M6PR	P20645	277 aa		10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641	AP3S2	P59780	193 aa		10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641	SELENOT	P62341	195 aa		10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641		Q6ZRN7	208 aa	Predicted RBP	10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641		Q6ZTI0	123 aa		10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641	LINC00305	Q7Z4B0	112 aa		10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641	CCDC190	Q86UF4	302 aa		10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641	VSIG2	Q96IQ7	327 aa		10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641	MGST2	Q99735	147 aa		10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641	UPK3B	Q9BT76	320 aa		10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641	TMPRSS5	Q9H3S3	457 aa		10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641	NPVF	Q9HCQ7	196 aa		10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641	ZNF586	Q9NXT0	402 aa		10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641	DNAH8	Q96JB1	4490 aa		10.43	□□□□□ -0.74
PRKD2-210	ENST00000597641	TRAV5	A0A0B4J249	113 aa		10.42	□□□□□ -0.74
PRKD2-210	ENST00000597641	AGPAT2	O15120	278 aa		10.42	□□□□□ -0.74
PRKD2-210	ENST00000597641	IGLC2	P0DOY2	106 aa		10.42	□□□□□ -0.74
PRKD2-210	ENST00000597641	S100A7	P31151	101 aa		10.42	□□□□□ -0.74
PRKD2-210	ENST00000597641	UBE2M	P61081	183 aa	Known RBP	10.42	□□□□□ -0.74
PRKD2-210	ENST00000597641	OPCML	Q14982	345 aa		10.42	□□□□□ -0.74
PRKD2-210	ENST00000597641	BAK1	Q16611	211 aa		10.42	□□□□□ -0.74
PRKD2-210	ENST00000597641	LCN15	Q6UWW0	184 aa		10.42	□□□□□ -0.74
PRKD2-210	ENST00000597641	SAT2	Q96F10	170 aa	Predicted RBP	10.42	□□□□□ -0.74
PRKD2-210	ENST00000597641		A0A096LPF7	62 aa		10.41	□□□□□ -0.74
PRKD2-210	ENST00000597641	TRAV12-3	A0A0B4J271	114 aa		10.41	□□□□□ -0.74
PRKD2-210	ENST00000597641	SCGB1D2	O95969	90 aa		10.41	□□□□□ -0.74
PRKD2-210	ENST00000597641	BTC	P35070	178 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms