RNA–Protein interactions for RNA: ENST00000596445.5

VRK3-211, Transcript of vaccinia related kinase 3, humanhuman

TSL 5

Gene VRK3, Length 840 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-211ENST00000596445 H3BQ15 152 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 OR7C2O60412 319 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 RBMY1DP0C7P1 496 aaKnown RBP6.19□□□□□ -1.42
VRK3-211ENST00000596445 PYYP10082 97 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 HIST1H1EP10412 219 aaKnown RBP6.19□□□□□ -1.42
VRK3-211ENST00000596445 SPP1P10451 314 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 TAS2R45P59539 299 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 ZNF124Q15973 351 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 KHDC3LQ587J8 217 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 TMEM41BQ5BJD5 291 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 FAM122CQ6P4D5 195 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 LINC00322Q6ZN03 302 aaPredicted RBP6.19□□□□□ -1.42
VRK3-211ENST00000596445 BAP18Q8IXM2 172 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 C9orf62Q8N4C0 152 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 RPP25LQ8N5L8 163 aaKnown RBP6.19□□□□□ -1.42
VRK3-211ENST00000596445 LRRC20Q8TCA0 184 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 SAT2Q96F10 170 aaPredicted RBP6.19□□□□□ -1.42
VRK3-211ENST00000596445 LINC00052Q96N35 136 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 B9D2Q9BPU9 175 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 PAXXQ9BUH6 204 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 OR51M1Q9H341 326 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 RPRMQ9NS64 109 aa6.19□□□□□ -1.42
VRK3-211ENST00000596445 TRBV19A0A075B6N1 114 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 LOC102724200A0A096LPH7 203 aaPredicted RBP6.18□□□□□ -1.42
VRK3-211ENST00000596445 SLC17A3O00476 420 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 ZNF253O75346 499 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 SNRPCP09234 159 aaKnown RBP6.18□□□□□ -1.42
VRK3-211ENST00000596445 NBEAP1P0C6P0 100 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 SEC11BP0C7V7 166 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 TPT1P13693 172 aaKnown RBP6.18□□□□□ -1.42
VRK3-211ENST00000596445 C4BPBP20851 252 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 CDC34P49427 236 aaPredicted RBP6.18□□□□□ -1.42
VRK3-211ENST00000596445 PDE6HQ13956 83 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 AKR1C8PQ5T2L2 129 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 PQLC2Q6ZP29 291 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 STHQ8IWL8 128 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 STOML3Q8TAV4 291 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 RNF141Q8WVD5 230 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 C20orf173Q96LM9 149 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 SLC50A1Q9BRV3 221 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 ZNF331Q9NQX6 463 aaPredicted RBP6.18□□□□□ -1.42
VRK3-211ENST00000596445 ZNF586Q9NXT0 402 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 CLEC5AQ9NY25 188 aa6.18□□□□□ -1.42
VRK3-211ENST00000596445 KNCNA6PVL3 124 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 UMAD1C9J7I0 102 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 H3BTX0 84 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 OR10J4P0C629 311 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 PSG9Q00887 426 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 PSG3Q16557 428 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 HAGHQ16775 308 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 ACTL10Q5JWF8 245 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 IGFL4Q6B9Z1 124 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 FOXI2Q6ZQN5 318 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 SLC51BQ86UW2 128 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 RNF182Q8N6D2 247 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 BLNKQ8WV28 456 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 RAB24Q969Q5 203 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 FXYD5Q96DB9 178 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 ZNF503Q96F45 646 aa6.17□□□□□ -1.42
VRK3-211ENST00000596445 ACTR3CQ9C0K3 210 aaPredicted RBP6.17□□□□□ -1.42
VRK3-211ENST00000596445 SAV1Q9H4B6 383 aaPredicted RBP6.17□□□□□ -1.42
VRK3-211ENST00000596445 KIR2DL5BA0A0G2JN68 375 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 KIR2DL5BA0A0G2JPC4 375 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 A0A0J9YX75 114 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 CTXND1A0A1B0GTU2 59 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 H3BMM0 161 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 UBE2CO00762 179 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 HMGB3O15347 200 aaKnown RBP6.16□□□□□ -1.42
VRK3-211ENST00000596445 EIF3GO75821 320 aaKnown RBP eCLIP6.16□□□□□ -1.42
VRK3-211ENST00000596445 NDUFB4O95168 129 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 STAG3L2P0CL84 134 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 STAG3L3P0CL85 134 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 ARL14EPLP0DKL9 152 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 HLA-DRB4P13762 266 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 RPL35AP18077 110 aaKnown RBP6.16□□□□□ -1.42
VRK3-211ENST00000596445 HLA-DMBP28068 263 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 NKX2-5P52952 324 aaPredicted RBP6.16□□□□□ -1.42
VRK3-211ENST00000596445 APOC4P55056 127 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 UBE2L3P68036 154 aaKnown RBP6.16□□□□□ -1.42
VRK3-211ENST00000596445 ZNF726P1Q15940 193 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 GDF5OSQ5U4N7 250 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 EIF5AL1Q6IS14 154 aaKnown RBP6.16□□□□□ -1.42
VRK3-211ENST00000596445 EBLN2Q6P2I7 272 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 TRPT1Q86TN4 253 aaKnown RBP6.16□□□□□ -1.42
VRK3-211ENST00000596445 SBSPONQ8IVN8 264 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 KIR2DL5AQ8N109 375 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 ZNF738Q8NE65 137 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 KIR2DL5BQ8NHK3 375 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 TMED6Q8WW62 240 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 PRELID1Q9Y255 219 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 HLA-DRB4X5D2U9 266 aa6.16□□□□□ -1.42
VRK3-211ENST00000596445 CXorf1O96002 111 aa6.15□□□□□ -1.42
VRK3-211ENST00000596445 NHLRC4P0CG21 123 aaPredicted RBP6.15□□□□□ -1.42
VRK3-211ENST00000596445 DEFB1P60022 68 aa6.15□□□□□ -1.42
VRK3-211ENST00000596445 MORN3Q6PF18 240 aaPredicted RBP6.15□□□□□ -1.42
VRK3-211ENST00000596445 DPPA3Q6W0C5 159 aa6.15□□□□□ -1.42
VRK3-211ENST00000596445 SSX7Q7RTT5 188 aa6.15□□□□□ -1.42
VRK3-211ENST00000596445 LYPD1Q8N2G4 141 aa6.15□□□□□ -1.42
VRK3-211ENST00000596445 SUN5Q8TC36 379 aa6.15□□□□□ -1.42
VRK3-211ENST00000596445 RPUSD4Q96CM3 377 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms