RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 SAT2Q96F10 170 aaPredicted RBP16.76■□□□□ 0.27
SNRNP70-204ENST00000595231 OR11H12B2RN74 326 aa16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 H3BTX0 84 aa16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 ISLRO14498 428 aa16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 HIST1H1EP10412 219 aaKnown RBP16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 TAS2R45P59539 299 aa16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 KHDC3LQ587J8 217 aa16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 FXYD5Q96DB9 178 aa16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 PAXXQ9BUH6 204 aa16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 ACTR3CQ9C0K3 210 aaPredicted RBP16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 TRAV8-2A0A0B4J237 113 aa16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 OR7C2O60412 319 aa16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 OR10J4P0C629 311 aa16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 STAG3L2P0CL84 134 aa16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 STAG3L3P0CL85 134 aa16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 DEFB125Q8N687 156 aa16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 C16orf92Q96LL3 132 aa16.75■□□□□ 0.27
SNRNP70-204ENST00000595231 UMAD1C9J7I0 102 aa16.74■□□□□ 0.27
SNRNP70-204ENST00000595231 SLC17A3O00476 420 aa16.74■□□□□ 0.27
SNRNP70-204ENST00000595231 PSMB3P49720 205 aa16.74■□□□□ 0.27
SNRNP70-204ENST00000595231 FHITP49789 147 aa16.74■□□□□ 0.27
SNRNP70-204ENST00000595231 CMC4P56277 68 aaPredicted RBP16.74■□□□□ 0.27
SNRNP70-204ENST00000595231 DEFB131AP59861 70 aa16.74■□□□□ 0.27
SNRNP70-204ENST00000595231 ZNF124Q15973 351 aa16.74■□□□□ 0.27
SNRNP70-204ENST00000595231 GUK1Q16774 197 aa16.74■□□□□ 0.27
SNRNP70-204ENST00000595231 SAMD13Q5VXD3 122 aa16.74■□□□□ 0.27
SNRNP70-204ENST00000595231 IGFL4Q6B9Z1 124 aa16.74■□□□□ 0.27
SNRNP70-204ENST00000595231 APRG1Q8IVJ8 170 aa16.74■□□□□ 0.27
SNRNP70-204ENST00000595231 RNF141Q8WVD5 230 aa16.74■□□□□ 0.27
SNRNP70-204ENST00000595231 CITED4Q96RK1 184 aa16.74■□□□□ 0.27
SNRNP70-204ENST00000595231 TRBV19A0A075B6N1 114 aa16.73■□□□□ 0.27
SNRNP70-204ENST00000595231 SNRPD3P62318 126 aaKnown RBP16.73■□□□□ 0.27
SNRNP70-204ENST00000595231 LCN15Q6UWW0 184 aa16.73■□□□□ 0.27
SNRNP70-204ENST00000595231 ZNF331Q9NQX6 463 aaPredicted RBP16.73■□□□□ 0.27
SNRNP70-204ENST00000595231 NDUFB4O95168 129 aa16.72■□□□□ 0.27
SNRNP70-204ENST00000595231 NBEAP1P0C6P0 100 aa16.72■□□□□ 0.27
SNRNP70-204ENST00000595231 ID1P41134 155 aa16.72■□□□□ 0.27
SNRNP70-204ENST00000595231 PSMG4Q5JS54 123 aa16.72■□□□□ 0.27
SNRNP70-204ENST00000595231 EIF5AL1Q6IS14 154 aaKnown RBP16.72■□□□□ 0.27
SNRNP70-204ENST00000595231 PQLC2Q6ZP29 291 aa16.72■□□□□ 0.27
SNRNP70-204ENST00000595231 C20orf173Q96LM9 149 aa16.72■□□□□ 0.27
SNRNP70-204ENST00000595231 CTXND1A0A1B0GTU2 59 aa16.72■□□□□ 0.27
SNRNP70-204ENST00000595231 ARL14EPLP0DKL9 152 aa16.72■□□□□ 0.27
SNRNP70-204ENST00000595231 IGHV4-30-4P0DP06 118 aa16.72■□□□□ 0.27
SNRNP70-204ENST00000595231 HLA-DMBP28068 263 aa16.71■□□□□ 0.27
SNRNP70-204ENST00000595231 RNF182Q8N6D2 247 aa16.71■□□□□ 0.27
SNRNP70-204ENST00000595231 BLNKQ8WV28 456 aa16.71■□□□□ 0.27
SNRNP70-204ENST00000595231 LINC00052Q96N35 136 aa16.71■□□□□ 0.27
SNRNP70-204ENST00000595231 A8MZ25 164 aa16.7■□□□□ 0.26
SNRNP70-204ENST00000595231 ZNF253O75346 499 aa16.7■□□□□ 0.26
SNRNP70-204ENST00000595231 PDE6HQ13956 83 aa16.7■□□□□ 0.26
SNRNP70-204ENST00000595231 LRRC20Q8TCA0 184 aa16.7■□□□□ 0.26
SNRNP70-204ENST00000595231 SLC50A1Q9BRV3 221 aa16.7■□□□□ 0.26
SNRNP70-204ENST00000595231 UBE2L3P68036 154 aaKnown RBP16.69■□□□□ 0.26
SNRNP70-204ENST00000595231 DEFB1P60022 68 aa16.69■□□□□ 0.26
SNRNP70-204ENST00000595231 DEFB121Q5J5C9 76 aa16.69■□□□□ 0.26
SNRNP70-204ENST00000595231 DPPA3Q6W0C5 159 aa16.69■□□□□ 0.26
SNRNP70-204ENST00000595231 FAM213BQ8TBF2 198 aa16.69■□□□□ 0.26
SNRNP70-204ENST00000595231 MRAPQ8TCY5 172 aa16.69■□□□□ 0.26
SNRNP70-204ENST00000595231 PHYHIPLQ96FC7 376 aa16.69■□□□□ 0.26
SNRNP70-204ENST00000595231 SRD5A3Q9H8P0 318 aa16.69■□□□□ 0.26
SNRNP70-204ENST00000595231 AGRNO00468 2067 aa16.68■□□□□ 0.26
SNRNP70-204ENST00000595231 CXorf1O96002 111 aa16.68■□□□□ 0.26
SNRNP70-204ENST00000595231 SULT1A2P50226 295 aa16.68■□□□□ 0.26
SNRNP70-204ENST00000595231 SUN5Q8TC36 379 aa16.68■□□□□ 0.26
SNRNP70-204ENST00000595231 PRKDCP78527 4128 aaKnown RBP16.68■□□□□ 0.26
SNRNP70-204ENST00000595231 GCHFRP30047 84 aa16.67■□□□□ 0.26
SNRNP70-204ENST00000595231 PSG3Q16557 428 aa16.67■□□□□ 0.26
SNRNP70-204ENST00000595231 RAB5CP51148 216 aa16.66■□□□□ 0.26
SNRNP70-204ENST00000595231 FAM74A1Q5RGS3 127 aa16.66■□□□□ 0.26
SNRNP70-204ENST00000595231 ALKAL2Q6UX46 152 aa16.66■□□□□ 0.26
SNRNP70-204ENST00000595231 LINC00322Q6ZN03 302 aaPredicted RBP16.66■□□□□ 0.26
SNRNP70-204ENST00000595231 MBD3L1Q8WWY6 194 aa16.66■□□□□ 0.26
SNRNP70-204ENST00000595231 TUBA4BQ9H853 241 aa16.66■□□□□ 0.26
SNRNP70-204ENST00000595231 MAP1LC3B2A6NCE7 125 aa16.65■□□□□ 0.26
SNRNP70-204ENST00000595231 RBMY1BA6NDE4 496 aaKnown RBP16.65■□□□□ 0.26
SNRNP70-204ENST00000595231 RBMY1EA6NEQ0 496 aaKnown RBP16.65■□□□□ 0.26
SNRNP70-204ENST00000595231 KNCNA6PVL3 124 aa16.65■□□□□ 0.26
SNRNP70-204ENST00000595231 RBMY1DP0C7P1 496 aaKnown RBP16.65■□□□□ 0.26
SNRNP70-204ENST00000595231 FGF8P55075 233 aaPredicted RBP16.65■□□□□ 0.26
SNRNP70-204ENST00000595231 PSG9Q00887 426 aa16.65■□□□□ 0.26
SNRNP70-204ENST00000595231 GDF5OSQ5U4N7 250 aa16.65■□□□□ 0.26
SNRNP70-204ENST00000595231 EXOC3-AS1Q8N2X6 119 aa16.65■□□□□ 0.26
SNRNP70-204ENST00000595231 MAP1LC3BQ9GZQ8 125 aa16.65■□□□□ 0.26
SNRNP70-204ENST00000595231 FRMD6-AS1P0C7T7 363 aa16.65■□□□□ 0.26
SNRNP70-204ENST00000595231 RANP62826 216 aaKnown RBP16.65■□□□□ 0.26
SNRNP70-204ENST00000595231 TMPRSS5Q9H3S3 457 aa16.65■□□□□ 0.26
SNRNP70-204ENST00000595231 CLEC5AQ9NY25 188 aa16.65■□□□□ 0.26
SNRNP70-204ENST00000595231 ZNF705FA8MVS1 300 aaPredicted RBP16.64■□□□□ 0.25
SNRNP70-204ENST00000595231 F6UB75 175 aa16.64■□□□□ 0.25
SNRNP70-204ENST00000595231 ACTL10Q5JWF8 245 aa16.64■□□□□ 0.25
SNRNP70-204ENST00000595231 SFT2D1Q8WV19 159 aa16.64■□□□□ 0.25
SNRNP70-204ENST00000595231 SAV1Q9H4B6 383 aaPredicted RBP16.64■□□□□ 0.25
SNRNP70-204ENST00000595231 PRB4P10163 310 aaPredicted RBP16.63■□□□□ 0.25
SNRNP70-204ENST00000595231 FOXI2Q6ZQN5 318 aa16.63■□□□□ 0.25
SNRNP70-204ENST00000595231 LYPD1Q8N2G4 141 aa16.63■□□□□ 0.25
SNRNP70-204ENST00000595231 ZNF738Q8NE65 137 aa16.63■□□□□ 0.25
SNRNP70-204ENST00000595231 TMEM167BQ9NRX6 74 aa16.63■□□□□ 0.25
SNRNP70-204ENST00000595231 M0R3E3 92 aa16.62■□□□□ 0.25
SNRNP70-204ENST00000595231 H2AFB1P0C5Y9 115 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms