RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 HIGD1AQ9Y241 93 aa7.41□□□□□ -1.22
USE1-203ENST00000593597 CBY3A6NI87 242 aa7.4□□□□□ -1.22
USE1-203ENST00000593597 K7EPK0 472 aa7.4□□□□□ -1.22
USE1-203ENST00000593597 SSSCA1O60232 199 aa7.4□□□□□ -1.22
USE1-203ENST00000593597 HYPMO75409 117 aa7.4□□□□□ -1.22
USE1-203ENST00000593597 IL5P05113 134 aa7.4□□□□□ -1.22
USE1-203ENST00000593597 ATP5G1P05496 136 aa7.4□□□□□ -1.22
USE1-203ENST00000593597 METTL15P1P0C7V9 234 aa7.4□□□□□ -1.22
USE1-203ENST00000593597 RPL7P18124 248 aaKnown RBP7.4□□□□□ -1.22
USE1-203ENST00000593597 HOXA5P20719 270 aa7.4□□□□□ -1.22
USE1-203ENST00000593597 BTCP35070 178 aa7.4□□□□□ -1.22
USE1-203ENST00000593597 ATP5G3P48201 142 aa7.4□□□□□ -1.22
USE1-203ENST00000593597 TAS2R60P59551 318 aa7.4□□□□□ -1.22
USE1-203ENST00000593597 RPP30P78346 268 aaKnown RBP7.4□□□□□ -1.22
USE1-203ENST00000593597 LINC01587Q99440 93 aa7.4□□□□□ -1.22
USE1-203ENST00000593597 ATG101Q9BSB4 218 aa7.4□□□□□ -1.22
USE1-203ENST00000593597 NOP10Q9NPE3 64 aaKnown RBP7.4□□□□□ -1.22
USE1-203ENST00000593597 ZNF331Q9NQX6 463 aaPredicted RBP7.4□□□□□ -1.22
USE1-203ENST00000593597 PSENENQ9NZ42 101 aa7.4□□□□□ -1.22
USE1-203ENST00000593597 RCL1Q9Y2P8 373 aaKnown RBP7.4□□□□□ -1.22
USE1-203ENST00000593597 LINC00854A0A1B0GVQ3 168 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 H3BTX0 84 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 OR5G3P0C626 314 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 AP3S2P59780 193 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 KRTAP10-2P60368 255 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 RAP2BP61225 183 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 B2MP61769 119 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 RHOBP62745 196 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 DLK1P80370 383 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 GFI1BQ5VTD9 330 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 SSX7Q7RTT5 188 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 MAPKAPK5-AS1Q8N8E1 139 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 RPUSD4Q96CM3 377 aaKnown RBP7.39□□□□□ -1.23
USE1-203ENST00000593597 C16orf74Q96GX8 76 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 SMIM8Q96KF7 97 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 SDHCQ99643 169 aaPredicted RBP7.39□□□□□ -1.23
USE1-203ENST00000593597 SRRQ9GZT4 340 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 ARV1Q9H2C2 271 aa7.39□□□□□ -1.23
USE1-203ENST00000593597 VPS13BQ7Z7G8 4022 aa7.38□□□□□ -1.23
USE1-203ENST00000593597 PIGBOS1A0A0B4J2F0 54 aa7.38□□□□□ -1.23
USE1-203ENST00000593597 NDUFB6O95139 128 aa7.38□□□□□ -1.23
USE1-203ENST00000593597 HTN1P15515 57 aa7.38□□□□□ -1.23
USE1-203ENST00000593597 CDKN1BP46527 198 aa7.38□□□□□ -1.23
USE1-203ENST00000593597 UBE2MP61081 183 aaKnown RBP7.38□□□□□ -1.23
USE1-203ENST00000593597 BAK1Q16611 211 aa7.38□□□□□ -1.23
USE1-203ENST00000593597 TMEM256Q8N2U0 113 aa7.38□□□□□ -1.23
USE1-203ENST00000593597 TMEM263Q8WUH6 116 aaKnown RBP7.38□□□□□ -1.23
USE1-203ENST00000593597 TMEM37Q8WXS4 190 aa7.38□□□□□ -1.23
USE1-203ENST00000593597 ARL6Q9H0F7 186 aa7.38□□□□□ -1.23
USE1-203ENST00000593597 RBM38Q9H0Z9 239 aaKnown RBP7.38□□□□□ -1.23
USE1-203ENST00000593597 TIMM8BQ9Y5J9 83 aaPredicted RBP7.38□□□□□ -1.23
USE1-203ENST00000593597 TRAV26-1A0A087WT03 109 aa7.37□□□□□ -1.23
USE1-203ENST00000593597 FNDC10F2Z333 226 aa7.37□□□□□ -1.23
USE1-203ENST00000593597 H3BQ15 152 aa7.37□□□□□ -1.23
USE1-203ENST00000593597 ZNF701M0R085 212 aaPredicted RBP7.37□□□□□ -1.23
USE1-203ENST00000593597 OR4E1P0C645 316 aa7.37□□□□□ -1.23
USE1-203ENST00000593597 IGLC2P0DOY2 106 aa7.37□□□□□ -1.23
USE1-203ENST00000593597 ANXA7P20073 488 aaKnown RBP7.37□□□□□ -1.23
USE1-203ENST00000593597 SELENOTP62341 195 aa7.37□□□□□ -1.23
USE1-203ENST00000593597 OPCMLQ14982 345 aa7.37□□□□□ -1.23
USE1-203ENST00000593597 ESRGQ1W209 222 aa7.37□□□□□ -1.23
USE1-203ENST00000593597 SPATA12Q7Z6I5 190 aa7.37□□□□□ -1.23
USE1-203ENST00000593597 DEDD2Q8WXF8 326 aa7.37□□□□□ -1.23
USE1-203ENST00000593597 SAT2Q96F10 170 aaPredicted RBP7.37□□□□□ -1.23
USE1-203ENST00000593597 MGST2Q99735 147 aa7.37□□□□□ -1.23
USE1-203ENST00000593597 MYCBP2O75592 4640 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 A0A0J9YY99 117 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 AGPAT2O15120 278 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 SCGB1D2O95969 90 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 CT45A10P0DMU9 189 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 CXCL2P19875 107 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 CCL18P55774 89 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 ZNF493Q6ZR52 646 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 LINC00305Q7Z4B0 112 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 Q8N1X5 172 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 RXFP4Q8TDU9 374 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 Q9H3A6 140 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 C11orf1Q9H5F2 150 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 Q9H8V8 135 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 NPVFQ9HCQ7 196 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 DNAH8Q96JB1 4490 aa7.36□□□□□ -1.23
USE1-203ENST00000593597 TRAV5A0A0B4J249 113 aa7.35□□□□□ -1.23
USE1-203ENST00000593597 GAGE12BA1L429 117 aa7.35□□□□□ -1.23
USE1-203ENST00000593597 C7orf66A4D0T2 115 aa7.35□□□□□ -1.23
USE1-203ENST00000593597 H7BYZ3 331 aa7.35□□□□□ -1.23
USE1-203ENST00000593597 NOL3O60936 208 aaKnown RBP7.35□□□□□ -1.23
USE1-203ENST00000593597 TSC22D2O75157 780 aa7.35□□□□□ -1.23
USE1-203ENST00000593597 GAGE7O76087 117 aa7.35□□□□□ -1.23
USE1-203ENST00000593597 MBPP02686 304 aaPredicted RBP7.35□□□□□ -1.23
USE1-203ENST00000593597 GAGE12FP0CL80 117 aa7.35□□□□□ -1.23
USE1-203ENST00000593597 GAGE12GP0CL81 117 aa7.35□□□□□ -1.23
USE1-203ENST00000593597 GAGE12IP0CL82 117 aa7.35□□□□□ -1.23
USE1-203ENST00000593597 IAH1Q2TAA2 248 aaPredicted RBP7.35□□□□□ -1.23
USE1-203ENST00000593597 TEPPQ6URK8 271 aa7.35□□□□□ -1.23
USE1-203ENST00000593597 LCN15Q6UWW0 184 aa7.35□□□□□ -1.23
USE1-203ENST00000593597 Q6ZRN7 208 aaPredicted RBP7.35□□□□□ -1.23
USE1-203ENST00000593597 VSIG2Q96IQ7 327 aa7.35□□□□□ -1.23
USE1-203ENST00000593597 UPK3BQ9BT76 320 aa7.35□□□□□ -1.23
USE1-203ENST00000593597 TMPRSS5Q9H3S3 457 aa7.35□□□□□ -1.23
USE1-203ENST00000593597 NPIPB6E9PJ23 425 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms