RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 ODF3L2Q3SX64 289 aa7.19□□□□□ -1.26
DDX39A-220ENST00000593008 LCN12Q6JVE5 192 aa7.19□□□□□ -1.26
DDX39A-220ENST00000593008 RBPMS2Q6ZRY4 209 aaKnown RBP7.19□□□□□ -1.26
DDX39A-220ENST00000593008 DCANP1Q8TF63 244 aa7.19□□□□□ -1.26
DDX39A-220ENST00000593008 BLNKQ8WV28 456 aa7.19□□□□□ -1.26
DDX39A-220ENST00000593008 MRPL32Q9BYC8 188 aaKnown RBP7.19□□□□□ -1.26
DDX39A-220ENST00000593008 MAP1LC3B2A6NCE7 125 aa7.18□□□□□ -1.26
DDX39A-220ENST00000593008 TSPAN4O14817 238 aa7.18□□□□□ -1.26
DDX39A-220ENST00000593008 NDUFB4O95168 129 aa7.18□□□□□ -1.26
DDX39A-220ENST00000593008 ZNF688P0C7X2 276 aa7.18□□□□□ -1.26
DDX39A-220ENST00000593008 STAG3L2P0CL84 134 aa7.18□□□□□ -1.26
DDX39A-220ENST00000593008 STAG3L3P0CL85 134 aa7.18□□□□□ -1.26
DDX39A-220ENST00000593008 CCL20P78556 96 aa7.18□□□□□ -1.26
DDX39A-220ENST00000593008 SERF2P84101 59 aa7.18□□□□□ -1.26
DDX39A-220ENST00000593008 IQCF2Q8IXL9 164 aa7.18□□□□□ -1.26
DDX39A-220ENST00000593008 PAXXQ9BUH6 204 aa7.18□□□□□ -1.26
DDX39A-220ENST00000593008 ACTR3CQ9C0K3 210 aaPredicted RBP7.18□□□□□ -1.26
DDX39A-220ENST00000593008 MAP1LC3BQ9GZQ8 125 aa7.18□□□□□ -1.26
DDX39A-220ENST00000593008 SORL1Q92673 2214 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 CTXND1A0A1B0GTU2 59 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 A0A1W2PPV4 95 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 HELTA6NFD8 242 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 PRAC2D3DTV9 90 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 F6UB75 175 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 K7EQG2 157 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 FRMD6-AS1P0C7T7 363 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 RPL7P18124 248 aaKnown RBP7.17□□□□□ -1.26
DDX39A-220ENST00000593008 ATF4P18848 351 aaPredicted RBP7.17□□□□□ -1.26
DDX39A-220ENST00000593008 GCHFRP30047 84 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 GALR1P47211 349 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 SULT1A2P50226 295 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 EIF5AP63241 154 aaKnown RBP7.17□□□□□ -1.26
DDX39A-220ENST00000593008 C1orf194Q5T5A4 169 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 SAMD13Q5VXD3 122 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 APRG1Q8IVJ8 170 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 EXOC3-AS1Q8N2X6 119 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 RNF141Q8WVD5 230 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 OR51M1Q9H341 326 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 MAP6D1Q9H9H5 199 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 NRN1Q9NPD7 142 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 TMEM14CQ9P0S9 112 aa7.17□□□□□ -1.26
DDX39A-220ENST00000593008 TRBV19A0A075B6N1 114 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 A0A087X0K7 114 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 KNCNA6PVL3 124 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 ZNF705FA8MVS1 300 aaPredicted RBP7.16□□□□□ -1.26
DDX39A-220ENST00000593008 ZNF705EA8MWA4 302 aaPredicted RBP7.16□□□□□ -1.26
DDX39A-220ENST00000593008 M0R3E3 92 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 MBP02144 154 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 ZNF705DP0CH99 300 aaPredicted RBP7.16□□□□□ -1.26
DDX39A-220ENST00000593008 ZNF705BP0CI00 300 aaPredicted RBP7.16□□□□□ -1.26
DDX39A-220ENST00000593008 IGHV4-30-4P0DP06 118 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 C4BPBP20851 252 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 CD81P60033 236 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 UBE2G2P60604 165 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 KHDC3LQ587J8 217 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 PSMG4Q5JS54 123 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 GDF5OSQ5U4N7 250 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 TEX261Q6UWH6 196 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 GTSCR1Q86UQ5 136 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 BPIFA4PQ86YQ2 179 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 SBSPONQ8IVN8 264 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 Q8N1Y9 231 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 ZNF680Q8NEM1 530 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 SFT2D1Q8WV19 159 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 SAT2Q96F10 170 aaPredicted RBP7.16□□□□□ -1.26
DDX39A-220ENST00000593008 LINC00052Q96N35 136 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 GPR82Q96P67 336 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 CITED4Q96RK1 184 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 C19orf73Q9NVV2 129 aa7.16□□□□□ -1.26
DDX39A-220ENST00000593008 YTHDF2Q9Y5A9 579 aaKnown RBP7.16□□□□□ -1.26
DDX39A-220ENST00000593008 GGTLC3B5MD39 225 aa7.15□□□□□ -1.26
DDX39A-220ENST00000593008 DNASE2O00115 360 aaPredicted RBP7.15□□□□□ -1.26
DDX39A-220ENST00000593008 HIST1H1EP10412 219 aaKnown RBP7.15□□□□□ -1.26
DDX39A-220ENST00000593008 DEFB131AP59861 70 aa7.15□□□□□ -1.26
DDX39A-220ENST00000593008 GNG5P63218 68 aa7.15□□□□□ -1.26
DDX39A-220ENST00000593008 DEFB125Q8N687 156 aa7.15□□□□□ -1.26
DDX39A-220ENST00000593008 C16orf92Q96LL3 132 aa7.15□□□□□ -1.26
DDX39A-220ENST00000593008 SPAG8Q99932 426 aaPredicted RBP7.15□□□□□ -1.26
DDX39A-220ENST00000593008 HRH4Q9H3N8 390 aa7.15□□□□□ -1.26
DDX39A-220ENST00000593008 RBMY1BA6NDE4 496 aaKnown RBP7.14□□□□□ -1.27
DDX39A-220ENST00000593008 RBMY1EA6NEQ0 496 aaKnown RBP7.14□□□□□ -1.27
DDX39A-220ENST00000593008 OR4C46A6NHA9 309 aa7.14□□□□□ -1.27
DDX39A-220ENST00000593008 UMAD1C9J7I0 102 aa7.14□□□□□ -1.27
DDX39A-220ENST00000593008 H2AFB1P0C5Y9 115 aa7.14□□□□□ -1.27
DDX39A-220ENST00000593008 NBEAP1P0C6P0 100 aa7.14□□□□□ -1.27
DDX39A-220ENST00000593008 RBMY1DP0C7P1 496 aaKnown RBP7.14□□□□□ -1.27
DDX39A-220ENST00000593008 NHLRC4P0CG21 123 aaPredicted RBP7.14□□□□□ -1.27
DDX39A-220ENST00000593008 ATP5G3P48201 142 aa7.14□□□□□ -1.27
DDX39A-220ENST00000593008 MEOX2P50222 304 aa7.14□□□□□ -1.27
DDX39A-220ENST00000593008 TAS2R45P59539 299 aa7.14□□□□□ -1.27
DDX39A-220ENST00000593008 RANP62826 216 aaKnown RBP7.14□□□□□ -1.27
DDX39A-220ENST00000593008 MBD3L1Q8WWY6 194 aa7.14□□□□□ -1.27
DDX39A-220ENST00000593008 ZNF331Q9NQX6 463 aaPredicted RBP7.14□□□□□ -1.27
DDX39A-220ENST00000593008 RPH3ALQ9UNE2 315 aa7.14□□□□□ -1.27
DDX39A-220ENST00000593008 U3KQK5 164 aa7.14□□□□□ -1.27
DDX39A-220ENST00000593008 IGKV2-40A0A087WW87 121 aaPredicted RBP7.13□□□□□ -1.27
DDX39A-220ENST00000593008 CXorf1O96002 111 aa7.13□□□□□ -1.27
DDX39A-220ENST00000593008 IGKV2D-40P01614 121 aaPredicted RBP7.13□□□□□ -1.27
DDX39A-220ENST00000593008 NMBP08949 121 aa7.13□□□□□ -1.27
DDX39A-220ENST00000593008 ICAM4Q14773 271 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms