RNA–Protein interactions for RNA: ENST00000591475.5

VPS4B-206, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 1 (best)

Gene VPS4B, Length 2,008 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-206ENST00000591475 KAAG1Q9UBP8 84 aa8.6□□□□□ -1.03
VPS4B-206ENST00000591475 TP73-AS1Q9UF72 201 aa8.6□□□□□ -1.03
VPS4B-206ENST00000591475 PLXNB1O43157 2135 aa8.6□□□□□ -1.03
VPS4B-206ENST00000591475 TAX1BP3O14907 124 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 IGLC1P0CG04 106 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 GATD1Q8NB37 220 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 SRSF12Q8WXF0 261 aaKnown RBP8.59□□□□□ -1.03
VPS4B-206ENST00000591475 COL12A1Q99715 3063 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 SPTBN1Q01082 2364 aaKnown RBP8.59□□□□□ -1.03
VPS4B-206ENST00000591475 UBR5O95071 2799 aaPredicted RBP8.59□□□□□ -1.03
VPS4B-206ENST00000591475 FAM208BQ5VWN6 2430 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 A0A1B0GW15 77 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 TEX22C9J3V5 150 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 K7EQM0 130 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 CSN3P07498 182 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 RHOGP84095 191 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 LINC01545Q5VT33 79 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 PPP1R27Q86WC6 154 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 PIP4P2Q8N4L2 257 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 DEFB125Q8N687 156 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 TMEM75Q8N9X5 138 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 RASL11BQ9BPW5 248 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 RNF24Q9Y225 148 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 INSIG2Q9Y5U4 225 aa8.59□□□□□ -1.03
VPS4B-206ENST00000591475 SHISA9B4DS77 424 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 H0Y8G0 127 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 TOX4O94842 621 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 RBP4P02753 201 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 CDKN1BP46527 198 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 RPS20P60866 119 aaKnown RBP8.58□□□□□ -1.04
VPS4B-206ENST00000591475 HIST1H1AQ02539 215 aaPredicted RBP8.58□□□□□ -1.04
VPS4B-206ENST00000591475 ZC2HC1AQ96GY0 325 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 AP5S1Q9NUS5 200 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 DOPEY1Q5JWR5 2465 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 IGHV1-3A0A0C4DH29 117 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 MUC21A0A0G2JKD1 596 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 MUC21A0A140T8X8 626 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 I3L2K1 104 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 OVOL3O00110 214 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 ARMS2P0C7Q2 107 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 MUC21Q5SSG8 566 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 NEU4Q8WWR8 484 aaPredicted RBP8.58□□□□□ -1.04
VPS4B-206ENST00000591475 PMCHL2Q9BQD1 86 aa8.58□□□□□ -1.04
VPS4B-206ENST00000591475 TIMM8BQ9Y5J9 83 aaPredicted RBP8.58□□□□□ -1.04
VPS4B-206ENST00000591475 TRBV19A0A075B6N1 114 aa8.57□□□□□ -1.04
VPS4B-206ENST00000591475 IGLV1-47P01700 117 aa8.57□□□□□ -1.04
VPS4B-206ENST00000591475 CSN1S1P47710 185 aa8.57□□□□□ -1.04
VPS4B-206ENST00000591475 ARF6P62330 175 aa8.57□□□□□ -1.04
VPS4B-206ENST00000591475 Q6AWC8 147 aa8.57□□□□□ -1.04
VPS4B-206ENST00000591475 FA2HQ7L5A8 372 aa8.57□□□□□ -1.04
VPS4B-206ENST00000591475 BPIFA4PQ86YQ2 179 aa8.57□□□□□ -1.04
VPS4B-206ENST00000591475 LYPD1Q8N2G4 141 aa8.57□□□□□ -1.04
VPS4B-206ENST00000591475 OR10AG1Q8NH19 301 aa8.57□□□□□ -1.04
VPS4B-206ENST00000591475 MCRIP2Q9BUT9 160 aaKnown RBP8.57□□□□□ -1.04
VPS4B-206ENST00000591475 DYNLRB1Q9NP97 96 aa8.57□□□□□ -1.04
VPS4B-206ENST00000591475 USP9XQ93008 2570 aaPredicted RBP8.56□□□□□ -1.04
VPS4B-206ENST00000591475 CBY3A6NI87 242 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 ZNF785A8K8V0 405 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 E7EQL1 145 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 CD5LO43866 347 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 APOBEC3AP31941 199 aaPredicted RBP8.56□□□□□ -1.04
VPS4B-206ENST00000591475 Q71RC1 249 aaPredicted RBP8.56□□□□□ -1.04
VPS4B-206ENST00000591475 ERASQ7Z444 233 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 PRSS3P2Q8NHM4 247 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 SHANK2-AS3Q9BTD1 123 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 ZNF747Q9BV97 191 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 FBXL15Q9H469 300 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 PSG8Q9UQ74 426 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 OR2T8A6NH00 312 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 H3BRN7 92 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 BUB1B-PAK6H3BSN5 160 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 COX8AP10176 69 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 GPR183P32249 361 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 PSG3Q16557 428 aa8.56□□□□□ -1.04
VPS4B-206ENST00000591475 SRSF8Q9BRL6 282 aaKnown RBP8.56□□□□□ -1.04
VPS4B-206ENST00000591475 MALRD1Q5VYJ5 2156 aa8.55□□□□□ -1.04
VPS4B-206ENST00000591475 A0A087X0K7 114 aa8.55□□□□□ -1.04
VPS4B-206ENST00000591475 C19orf84I3L1E1 186 aa8.55□□□□□ -1.04
VPS4B-206ENST00000591475 IGKV1-17P01599 117 aa8.55□□□□□ -1.04
VPS4B-206ENST00000591475 PLGLAQ15195 96 aa8.55□□□□□ -1.04
VPS4B-206ENST00000591475 ZNF672Q499Z4 452 aaPredicted RBP8.55□□□□□ -1.04
VPS4B-206ENST00000591475 SAPCD1Q5SSQ6 148 aa8.55□□□□□ -1.04
VPS4B-206ENST00000591475 SIGLEC15Q6ZMC9 328 aa8.55□□□□□ -1.04
VPS4B-206ENST00000591475 C17orf77Q96MU5 243 aa8.55□□□□□ -1.04
VPS4B-206ENST00000591475 RALYQ9UKM9 306 aaKnown RBP8.55□□□□□ -1.04
VPS4B-206ENST00000591475 B9A039 149 aa8.54□□□□□ -1.04
VPS4B-206ENST00000591475 RPEQ96AT9 228 aa8.54□□□□□ -1.04
VPS4B-206ENST00000591475 RNF5Q99942 180 aa8.54□□□□□ -1.04
VPS4B-206ENST00000591475 CNIH1O95406 144 aa8.54□□□□□ -1.04
VPS4B-206ENST00000591475 CT45A10P0DMU9 189 aa8.54□□□□□ -1.04
VPS4B-206ENST00000591475 DLX1P56177 255 aa8.54□□□□□ -1.04
VPS4B-206ENST00000591475 AMMECR1LQ6DCA0 310 aa8.54□□□□□ -1.04
VPS4B-206ENST00000591475 ZNF493Q6ZR52 646 aa8.54□□□□□ -1.04
VPS4B-206ENST00000591475 DPF1Q92782 380 aa8.54□□□□□ -1.04
VPS4B-206ENST00000591475 TPPP3Q9BW30 176 aa8.54□□□□□ -1.04
VPS4B-206ENST00000591475 ROS1P08922 2347 aa8.54□□□□□ -1.04
VPS4B-206ENST00000591475 K7EIM0 57 aa8.53□□□□□ -1.04
VPS4B-206ENST00000591475 GOSR1O95249 250 aa8.53□□□□□ -1.04
VPS4B-206ENST00000591475 COX7A1P24310 79 aa8.53□□□□□ -1.04
VPS4B-206ENST00000591475 CRIP1P50238 77 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms