RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 OPRK1P41145 380 aa5.84□□□□□ -1.47
SMAD4-209ENST00000589941 CDC34P49427 236 aaPredicted RBP5.84□□□□□ -1.47
SMAD4-209ENST00000589941 CNN1P51911 297 aaKnown RBP5.84□□□□□ -1.47
SMAD4-209ENST00000589941 GNB1P62873 340 aa5.84□□□□□ -1.47
SMAD4-209ENST00000589941 HTD2P86397 168 aa5.84□□□□□ -1.47
SMAD4-209ENST00000589941 TRAT1Q6PIZ9 186 aa5.84□□□□□ -1.47
SMAD4-209ENST00000589941 RPUSD4Q96CM3 377 aaKnown RBP5.84□□□□□ -1.47
SMAD4-209ENST00000589941 RBM14Q96PK6 669 aaKnown RBP5.84□□□□□ -1.47
SMAD4-209ENST00000589941 YPEL2Q96QA6 119 aa5.84□□□□□ -1.47
SMAD4-209ENST00000589941 HSD17B10Q99714 261 aaKnown RBP5.84□□□□□ -1.47
SMAD4-209ENST00000589941 PRO1933Q9H354 126 aa5.84□□□□□ -1.47
SMAD4-209ENST00000589941 TRAPPC2LQ9UL33 140 aa5.84□□□□□ -1.47
SMAD4-209ENST00000589941 C17orf98A8MV24 154 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 C9JCJ5 164 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 C11orf94C9JXX5 98 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 SIRPB1O00241 398 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 ITGB1BP1O14713 200 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 S1PR2O95136 353 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 HAND1O96004 215 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 STAG3L2P0CL84 134 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 STAG3L3P0CL85 134 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 GABRA2P47869 451 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 INSL3P51460 131 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 ERVFC1-1P60608 527 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 RPL31P62899 125 aaKnown RBP5.83□□□□□ -1.48
SMAD4-209ENST00000589941 TCF23Q7RTU1 214 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 PRR26Q8N8Z3 221 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 OR11H1Q8NG94 326 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 OR11H6Q8NGC7 330 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 OR1L1Q8NH94 360 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 IL1F10Q8WWZ1 152 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 GALMQ96C23 342 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 COQ2Q96H96 371 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 C20orf144Q9BQM9 153 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 NCOR1P1Q9H4R4 102 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 FUT9Q9Y231 359 aa5.83□□□□□ -1.48
SMAD4-209ENST00000589941 A0A1W2PPQ1 181 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 C15orf65H3BRN8 121 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 HBZP02008 142 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 OR10J4P0C629 311 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 AREGP15514 252 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 RAB4AP20338 218 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 G6PCP35575 357 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 OR3A1P47881 315 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 RBMY1FQ15415 496 aaKnown RBP5.82□□□□□ -1.48
SMAD4-209ENST00000589941 LGALS9CQ6DKI2 356 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 OR8G2PQ6IF36 304 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 TEX43Q6ZNM6 134 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 ZNF709Q8N972 641 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 OR4P4Q8NGL7 312 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 C4orf3Q8WVX3 66 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 ZNF479Q96JC4 524 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 KRTAP9-8Q9BYQ0 159 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 OR2D2Q9H210 308 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 GNB4Q9HAV0 340 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 DNAH5Q8TE73 4624 aa5.82□□□□□ -1.48
SMAD4-209ENST00000589941 TRBV20OR9-2A0A075B6H5 130 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 SAA2-SAA4A0A096LPE2 208 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 TRBV9A0A0B4J1U6 114 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 TRAV39A0A0B4J263 110 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 NUPR2A6NF83 97 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 M0QZK8 103 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 MMP23AO75900 390 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 OR10J1P30954 320 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 DUTP33316 252 aaKnown RBP5.81□□□□□ -1.48
SMAD4-209ENST00000589941 KIR2DS2P43631 304 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 PAFAH1B2P68402 229 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 RPP30P78346 268 aaKnown RBP5.81□□□□□ -1.48
SMAD4-209ENST00000589941 Q0VG73 95 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 POU2AF1Q16633 256 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 TEX38Q6PEX7 206 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 C16orf54Q6UWD8 224 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 H2BFWTQ7Z2G1 175 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 OR10G8Q8NGN5 311 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 TMEM37Q8WXS4 190 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 ARPC1AQ92747 370 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 SFRP2Q96HF1 295 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 GGTLC1Q9BX51 225 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 SNHG12Q9BXW3 62 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 PPP1R14DQ9NXH3 145 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 FKBP11Q9NYL4 201 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 NAGKQ9UJ70 344 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 TP53TG3Q9ULZ0 132 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 MOB4Q9Y3A3 225 aa5.81□□□□□ -1.48
SMAD4-209ENST00000589941 RBM7Q9Y580 266 aaKnown RBP5.81□□□□□ -1.48
SMAD4-209ENST00000589941 TRGV10A0A0A0MS01 117 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 IGHV2-26A0A0B4J1V2 119 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 OVOL1O14753 267 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 TCAPO15273 167 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 CXorf1O96002 111 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 HPRT1P00492 218 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 KRASP01116 189 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 SNRPCP09234 159 aaKnown RBP5.8□□□□□ -1.48
SMAD4-209ENST00000589941 OR9G9P0C7N8 305 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 ATP5G3P48201 142 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 ZNF816Q0VGE8 651 aaPredicted RBP5.8□□□□□ -1.48
SMAD4-209ENST00000589941 GAGE1Q13065 139 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 COX19Q49B96 90 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 FAM78BQ5VT40 261 aa5.8□□□□□ -1.48
SMAD4-209ENST00000589941 CEMP1Q6PRD7 247 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms