RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 MYCNOSP40205 109 aa13.28□□□□□ -0.28
CXXC1-212ENST00000589940 C10orf91Q5T1B1 145 aa13.28□□□□□ -0.28
CXXC1-212ENST00000589940 GLMPQ8WWB7 406 aa13.28□□□□□ -0.28
CXXC1-212ENST00000589940 RAX2Q96IS3 184 aa13.28□□□□□ -0.28
CXXC1-212ENST00000589940 C17orf77Q96MU5 243 aa13.28□□□□□ -0.28
CXXC1-212ENST00000589940 RHPN1-AS1Q9BWJ2 59 aa13.28□□□□□ -0.28
CXXC1-212ENST00000589940 SMPXQ9UHP9 88 aa13.28□□□□□ -0.28
CXXC1-212ENST00000589940 NDUFB4O95168 129 aa13.28□□□□□ -0.28
CXXC1-212ENST00000589940 FHL3Q13643 280 aa13.28□□□□□ -0.28
CXXC1-212ENST00000589940 A0A087X0K7 114 aa13.27□□□□□ -0.28
CXXC1-212ENST00000589940 KRTAP10-3P60369 221 aa13.27□□□□□ -0.28
CXXC1-212ENST00000589940 FAM90A2PQ658T7 463 aa13.27□□□□□ -0.28
CXXC1-212ENST00000589940 SIGLEC15Q6ZMC9 328 aa13.27□□□□□ -0.28
CXXC1-212ENST00000589940 Q9H3A6 140 aa13.27□□□□□ -0.28
CXXC1-212ENST00000589940 SLC17A3O00476 420 aa13.27□□□□□ -0.29
CXXC1-212ENST00000589940 CHEK1O14757 476 aa13.27□□□□□ -0.29
CXXC1-212ENST00000589940 LYPD1Q8N2G4 141 aa13.27□□□□□ -0.29
CXXC1-212ENST00000589940 ELOVL1Q9BW60 279 aa13.27□□□□□ -0.29
CXXC1-212ENST00000589940 CARHSP1Q9Y2V2 147 aaKnown RBP13.27□□□□□ -0.29
CXXC1-212ENST00000589940 ATRQ13535 2644 aa13.27□□□□□ -0.29
CXXC1-212ENST00000589940 SCO2A0A1W2PP80 73 aa13.26□□□□□ -0.29
CXXC1-212ENST00000589940 ZNF785A8K8V0 405 aa13.26□□□□□ -0.29
CXXC1-212ENST00000589940 CCL24O00175 119 aa13.26□□□□□ -0.29
CXXC1-212ENST00000589940 EDN2P20800 178 aa13.26□□□□□ -0.29
CXXC1-212ENST00000589940 BMI1P35226 326 aa13.26□□□□□ -0.29
CXXC1-212ENST00000589940 C11orf52Q96A22 123 aa13.26□□□□□ -0.29
CXXC1-212ENST00000589940 TCEAL7Q9BRU2 100 aa13.26□□□□□ -0.29
CXXC1-212ENST00000589940 OTORQ9NRC9 128 aa13.26□□□□□ -0.29
CXXC1-212ENST00000589940 PGPA6NDG6 321 aa13.25□□□□□ -0.29
CXXC1-212ENST00000589940 ADARB2-AS1A8MUL3 147 aa13.25□□□□□ -0.29
CXXC1-212ENST00000589940 ZNF253O75346 499 aa13.25□□□□□ -0.29
CXXC1-212ENST00000589940 APOC3P02656 99 aa13.25□□□□□ -0.29
CXXC1-212ENST00000589940 MEOX2P50222 304 aa13.25□□□□□ -0.29
CXXC1-212ENST00000589940 DLX4Q92988 240 aaPredicted RBP13.25□□□□□ -0.29
CXXC1-212ENST00000589940 RPUSD4Q96CM3 377 aaKnown RBP13.25□□□□□ -0.29
CXXC1-212ENST00000589940 C2orf70A6NJV1 201 aa13.24□□□□□ -0.29
CXXC1-212ENST00000589940 PSG9Q00887 426 aa13.24□□□□□ -0.29
CXXC1-212ENST00000589940 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.24□□□□□ -0.29
CXXC1-212ENST00000589940 NDUFA11Q86Y39 141 aa13.24□□□□□ -0.29
CXXC1-212ENST00000589940 EXOC3-AS1Q8N2X6 119 aa13.24□□□□□ -0.29
CXXC1-212ENST00000589940 PEMTQ9UBM1 199 aa13.24□□□□□ -0.29
CXXC1-212ENST00000589940 HELTA6NFD8 242 aa13.24□□□□□ -0.29
CXXC1-212ENST00000589940 SLC25A5P05141 298 aaKnown RBP13.24□□□□□ -0.29
CXXC1-212ENST00000589940 C5orf17Q8NAS9 161 aa13.24□□□□□ -0.29
CXXC1-212ENST00000589940 OR9G4Q8NGQ1 327 aa13.24□□□□□ -0.29
CXXC1-212ENST00000589940 PARLQ9H300 379 aa13.24□□□□□ -0.29
CXXC1-212ENST00000589940 TENM1Q9UKZ4 2725 aa13.24□□□□□ -0.29
CXXC1-212ENST00000589940 CBLN1P23435 193 aa13.23□□□□□ -0.29
CXXC1-212ENST00000589940 NSUN5P1Q3KNT7 163 aa13.23□□□□□ -0.29
CXXC1-212ENST00000589940 AAMDCQ9H7C9 122 aa13.23□□□□□ -0.29
CXXC1-212ENST00000589940 ZNF674Q2M3X9 581 aa13.23□□□□□ -0.29
CXXC1-212ENST00000589940 AWAT1Q58HT5 328 aa13.23□□□□□ -0.29
CXXC1-212ENST00000589940 HIST1H2BAQ96A08 127 aa13.23□□□□□ -0.29
CXXC1-212ENST00000589940 SMIM7Q9BQ49 75 aa13.23□□□□□ -0.29
CXXC1-212ENST00000589940 ZNF331Q9NQX6 463 aaPredicted RBP13.23□□□□□ -0.29
CXXC1-212ENST00000589940 EPDR1Q9UM22 224 aa13.23□□□□□ -0.29
CXXC1-212ENST00000589940 ZNF727A8MUV8 499 aa13.22□□□□□ -0.29
CXXC1-212ENST00000589940 FOLR2P14207 255 aa13.22□□□□□ -0.29
CXXC1-212ENST00000589940 GUCA2BQ16661 112 aa13.22□□□□□ -0.29
CXXC1-212ENST00000589940 FAM74A3Q4VXF1 159 aa13.22□□□□□ -0.29
CXXC1-212ENST00000589940 SLC50A1Q9BRV3 221 aa13.22□□□□□ -0.29
CXXC1-212ENST00000589940 NIPSNAP3BQ9BS92 247 aa13.22□□□□□ -0.29
CXXC1-212ENST00000589940 DERL1Q9BUN8 251 aa13.22□□□□□ -0.29
CXXC1-212ENST00000589940 M0QZ24 198 aa13.21□□□□□ -0.29
CXXC1-212ENST00000589940 PEX7O00628 323 aa13.21□□□□□ -0.29
CXXC1-212ENST00000589940 SVBPQ8N300 66 aa13.21□□□□□ -0.29
CXXC1-212ENST00000589940 CMTM2Q8TAZ6 248 aa13.21□□□□□ -0.29
CXXC1-212ENST00000589940 C2CD4CQ8TF44 421 aa13.21□□□□□ -0.29
CXXC1-212ENST00000589940 RPL11P62913 178 aaKnown RBP13.21□□□□□ -0.29
CXXC1-212ENST00000589940 GNG5P63218 68 aa13.21□□□□□ -0.29
CXXC1-212ENST00000589940 TCF24Q7RTU0 167 aa13.21□□□□□ -0.29
CXXC1-212ENST00000589940 ADAMTSL5Q6ZMM2 481 aa13.2□□□□□ -0.3
CXXC1-212ENST00000589940 ATG101Q9BSB4 218 aa13.2□□□□□ -0.3
CXXC1-212ENST00000589940 NRN1Q9NPD7 142 aa13.2□□□□□ -0.3
CXXC1-212ENST00000589940 TCRAP04437 139 aa13.2□□□□□ -0.3
CXXC1-212ENST00000589940 RPL35P42766 123 aaKnown RBP13.2□□□□□ -0.3
CXXC1-212ENST00000589940 KRTAP24-1Q3LI83 254 aa13.2□□□□□ -0.3
CXXC1-212ENST00000589940 AKR1C3P42330 323 aa13.19□□□□□ -0.3
CXXC1-212ENST00000589940 PRIMA1Q86XR5 153 aa13.19□□□□□ -0.3
CXXC1-212ENST00000589940 MLXQ9UH92 298 aa13.19□□□□□ -0.3
CXXC1-212ENST00000589940 RPH3ALQ9UNE2 315 aa13.19□□□□□ -0.3
CXXC1-212ENST00000589940 M0R3E3 92 aa13.19□□□□□ -0.3
CXXC1-212ENST00000589940 IGFL4Q6B9Z1 124 aa13.19□□□□□ -0.3
CXXC1-212ENST00000589940 CITED1Q99966 193 aa13.19□□□□□ -0.3
CXXC1-212ENST00000589940 SELENOKQ9Y6D0 94 aa13.19□□□□□ -0.3
CXXC1-212ENST00000589940 WNK1Q9H4A3 2382 aa13.18□□□□□ -0.3
CXXC1-212ENST00000589940 CSN3P07498 182 aa13.18□□□□□ -0.3
CXXC1-212ENST00000589940 CNN1P51911 297 aaKnown RBP13.18□□□□□ -0.3
CXXC1-212ENST00000589940 NAT8Q9UHE5 227 aa13.18□□□□□ -0.3
CXXC1-212ENST00000589940 TRAV8-2A0A0B4J237 113 aa13.17□□□□□ -0.3
CXXC1-212ENST00000589940 SOCS3O14543 225 aa13.17□□□□□ -0.3
CXXC1-212ENST00000589940 OVOL1O14753 267 aa13.17□□□□□ -0.3
CXXC1-212ENST00000589940 CSN1S1P47710 185 aa13.17□□□□□ -0.3
CXXC1-212ENST00000589940 TMEM241Q24JQ0 296 aa13.17□□□□□ -0.3
CXXC1-212ENST00000589940 ARL6IP6Q8N6S5 226 aa13.17□□□□□ -0.3
CXXC1-212ENST00000589940 C16orf92Q96LL3 132 aa13.17□□□□□ -0.3
CXXC1-212ENST00000589940 LINC00479Q96M42 142 aa13.17□□□□□ -0.3
CXXC1-212ENST00000589940 CLEC5AQ9NY25 188 aa13.17□□□□□ -0.3
CXXC1-212ENST00000589940 TRBV20OR9-2A0A075B6H5 130 aa13.17□□□□□ -0.3
CXXC1-212ENST00000589940 IGKV3-7A0A075B6H7 116 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms