RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 H7BYZ3 331 aa9.75□□□□□ -0.85
VMP1-209ENST00000588915 ADAP1O75689 374 aa9.75□□□□□ -0.85
VMP1-209ENST00000588915 ID3Q02535 119 aa9.75□□□□□ -0.85
VMP1-209ENST00000588915 C4orf46Q504U0 113 aa9.75□□□□□ -0.85
VMP1-209ENST00000588915 TOMM5Q8N4H5 51 aa9.75□□□□□ -0.85
VMP1-209ENST00000588915 RNASE8Q8TDE3 154 aaKnown RBP9.75□□□□□ -0.85
VMP1-209ENST00000588915 SLIRPQ9GZT3 109 aaKnown RBP9.75□□□□□ -0.85
VMP1-209ENST00000588915 FNDC10F2Z333 226 aa9.74□□□□□ -0.85
VMP1-209ENST00000588915 H3BNG1 76 aa9.74□□□□□ -0.85
VMP1-209ENST00000588915 K7EPK0 472 aa9.74□□□□□ -0.85
VMP1-209ENST00000588915 HOXB5P09067 269 aa9.74□□□□□ -0.85
VMP1-209ENST00000588915 LINC00869P0C866 280 aa9.74□□□□□ -0.85
VMP1-209ENST00000588915 CXCL2P19875 107 aa9.74□□□□□ -0.85
VMP1-209ENST00000588915 UBE2MP61081 183 aaKnown RBP9.74□□□□□ -0.85
VMP1-209ENST00000588915 PXDC1Q5TGL8 231 aa9.74□□□□□ -0.85
VMP1-209ENST00000588915 LINC00612Q8N6U2 182 aa9.74□□□□□ -0.85
VMP1-209ENST00000588915 LRRC20Q8TCA0 184 aa9.74□□□□□ -0.85
VMP1-209ENST00000588915 RXFP4Q8TDU9 374 aa9.74□□□□□ -0.85
VMP1-209ENST00000588915 UPK3BQ9BT76 320 aa9.74□□□□□ -0.85
VMP1-209ENST00000588915 NPVFQ9HCQ7 196 aa9.74□□□□□ -0.85
VMP1-209ENST00000588915 PMS2P5A8MQ11 134 aa9.73□□□□□ -0.85
VMP1-209ENST00000588915 OR5G3P0C626 314 aa9.73□□□□□ -0.85
VMP1-209ENST00000588915 M6PRP20645 277 aa9.73□□□□□ -0.85
VMP1-209ENST00000588915 PPP1R1AQ13522 171 aa9.73□□□□□ -0.85
VMP1-209ENST00000588915 TRIM63Q969Q1 353 aa9.73□□□□□ -0.85
VMP1-209ENST00000588915 RPUSD4Q96CM3 377 aaKnown RBP9.73□□□□□ -0.85
VMP1-209ENST00000588915 GNPNAT1Q96EK6 184 aaPredicted RBP9.73□□□□□ -0.85
VMP1-209ENST00000588915 Q9H3A6 140 aa9.73□□□□□ -0.85
VMP1-209ENST00000588915 NOP10Q9NPE3 64 aaKnown RBP9.73□□□□□ -0.85
VMP1-209ENST00000588915 SMCO3A2RU48 225 aa9.72□□□□□ -0.85
VMP1-209ENST00000588915 H3BP45 60 aa9.72□□□□□ -0.85
VMP1-209ENST00000588915 MRPS12O15235 138 aaKnown RBP9.72□□□□□ -0.85
VMP1-209ENST00000588915 HTN1P15515 57 aa9.72□□□□□ -0.85
VMP1-209ENST00000588915 DLK1P80370 383 aa9.72□□□□□ -0.85
VMP1-209ENST00000588915 LCN15Q6UWW0 184 aa9.72□□□□□ -0.85
VMP1-209ENST00000588915 SPATA12Q7Z6I5 190 aa9.72□□□□□ -0.85
VMP1-209ENST00000588915 CCDC28AQ8IWP9 274 aa9.72□□□□□ -0.85
VMP1-209ENST00000588915 SMIM8Q96KF7 97 aa9.72□□□□□ -0.85
VMP1-209ENST00000588915 SLC50A1Q9BRV3 221 aa9.72□□□□□ -0.85
VMP1-209ENST00000588915 PSENENQ9NZ42 101 aa9.72□□□□□ -0.85
VMP1-209ENST00000588915 ANXA7P20073 488 aaKnown RBP9.71□□□□□ -0.86
VMP1-209ENST00000588915 POLR2GP62487 172 aaKnown RBP eCLIP9.71□□□□□ -0.86
VMP1-209ENST00000588915 OR5I1Q13606 314 aa9.71□□□□□ -0.86
VMP1-209ENST00000588915 TEPPQ6URK8 271 aa9.71□□□□□ -0.86
VMP1-209ENST00000588915 PATE2Q6UY27 113 aa9.71□□□□□ -0.86
VMP1-209ENST00000588915 CCDC190Q86UF4 302 aa9.71□□□□□ -0.86
VMP1-209ENST00000588915 MCFD2Q8NI22 146 aa9.71□□□□□ -0.86
VMP1-209ENST00000588915 UHRF2Q96PU4 802 aa9.71□□□□□ -0.86
VMP1-209ENST00000588915 ARL6Q9H0F7 186 aa9.71□□□□□ -0.86
VMP1-209ENST00000588915 ARV1Q9H2C2 271 aa9.71□□□□□ -0.86
VMP1-209ENST00000588915 SCRT2Q9NQ03 307 aa9.71□□□□□ -0.86
VMP1-209ENST00000588915 ZNF331Q9NQX6 463 aaPredicted RBP9.71□□□□□ -0.86
VMP1-209ENST00000588915 TRAV26-1A0A087WT03 109 aa9.7□□□□□ -0.86
VMP1-209ENST00000588915 ZNF701M0R085 212 aaPredicted RBP9.7□□□□□ -0.86
VMP1-209ENST00000588915 PYDC2Q56P42 97 aa9.7□□□□□ -0.86
VMP1-209ENST00000588915 C9orf170A2RU37 121 aa9.69□□□□□ -0.86
VMP1-209ENST00000588915 SNURFLB1AK76 121 aa9.69□□□□□ -0.86
VMP1-209ENST00000588915 NOL3O60936 208 aaKnown RBP9.69□□□□□ -0.86
VMP1-209ENST00000588915 ESRGQ1W209 222 aa9.69□□□□□ -0.86
VMP1-209ENST00000588915 TMEM14EPQ6UXP3 125 aa9.69□□□□□ -0.86
VMP1-209ENST00000588915 BPIFA4PQ86YQ2 179 aa9.69□□□□□ -0.86
VMP1-209ENST00000588915 OR10P1Q8NGE3 313 aa9.69□□□□□ -0.86
VMP1-209ENST00000588915 GGACTQ9BVM4 153 aa9.69□□□□□ -0.86
VMP1-209ENST00000588915 MRPS16Q9Y3D3 137 aaKnown RBP9.69□□□□□ -0.86
VMP1-209ENST00000588915 H3BMQ9 156 aa9.68□□□□□ -0.86
VMP1-209ENST00000588915 GOSR2O14653 212 aa9.68□□□□□ -0.86
VMP1-209ENST00000588915 RLN2P04090 185 aa9.68□□□□□ -0.86
VMP1-209ENST00000588915 TAS2R30P59541 319 aa9.68□□□□□ -0.86
VMP1-209ENST00000588915 DAZ2Q13117 558 aaKnown RBP9.68□□□□□ -0.86
VMP1-209ENST00000588915 LINC00305Q7Z4B0 112 aa9.68□□□□□ -0.86
VMP1-209ENST00000588915 ZNF546Q86UE3 836 aa9.68□□□□□ -0.86
VMP1-209ENST00000588915 ODF3Q96PU9 254 aa9.68□□□□□ -0.86
VMP1-209ENST00000588915 KRTAP1-5Q9BYS1 174 aa9.68□□□□□ -0.86
VMP1-209ENST00000588915 MGAT4CQ9UBM8 478 aa9.68□□□□□ -0.86
VMP1-209ENST00000588915 PXMP4Q9Y6I8 212 aa9.68□□□□□ -0.86
VMP1-209ENST00000588915 V9GYH0 126 aa9.68□□□□□ -0.86
VMP1-209ENST00000588915 SSSCA1O60232 199 aa9.67□□□□□ -0.86
VMP1-209ENST00000588915 TSC22D2O75157 780 aa9.67□□□□□ -0.86
VMP1-209ENST00000588915 HOXA5P20719 270 aa9.67□□□□□ -0.86
VMP1-209ENST00000588915 RRAS2P62070 204 aaPredicted RBP9.67□□□□□ -0.86
VMP1-209ENST00000588915 GFI1BQ5VTD9 330 aa9.67□□□□□ -0.86
VMP1-209ENST00000588915 C18orf15Q96N68 181 aa9.67□□□□□ -0.86
VMP1-209ENST00000588915 PYGO2Q9BRQ0 406 aa9.67□□□□□ -0.86
VMP1-209ENST00000588915 GAGE12BA1L429 117 aa9.66□□□□□ -0.86
VMP1-209ENST00000588915 GAGE7O76087 117 aa9.66□□□□□ -0.86
VMP1-209ENST00000588915 METTL15P1P0C7V9 234 aa9.66□□□□□ -0.86
VMP1-209ENST00000588915 GAGE12FP0CL80 117 aa9.66□□□□□ -0.86
VMP1-209ENST00000588915 GAGE12GP0CL81 117 aa9.66□□□□□ -0.86
VMP1-209ENST00000588915 GAGE12IP0CL82 117 aa9.66□□□□□ -0.86
VMP1-209ENST00000588915 S100A5P33763 92 aa9.66□□□□□ -0.86
VMP1-209ENST00000588915 KRTAP10-2P60368 255 aa9.66□□□□□ -0.86
VMP1-209ENST00000588915 KIR3DS1Q14943 382 aa9.66□□□□□ -0.86
VMP1-209ENST00000588915 A0A0J9YY99 117 aa9.65□□□□□ -0.86
VMP1-209ENST00000588915 NAP1L6A6NFF2 107 aa9.65□□□□□ -0.86
VMP1-209ENST00000588915 AGPAT2O15120 278 aa9.65□□□□□ -0.86
VMP1-209ENST00000588915 CCNKO75909 580 aa9.65□□□□□ -0.86
VMP1-209ENST00000588915 LEPP41159 167 aa9.65□□□□□ -0.86
VMP1-209ENST00000588915 SLC38A11Q08AI6 406 aa9.65□□□□□ -0.86
VMP1-209ENST00000588915 GUK1Q16774 197 aa9.65□□□□□ -0.86
VMP1-209ENST00000588915 SAT2Q96F10 170 aaPredicted RBP9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms