RNA–Protein interactions for RNA: ENST00000588618.5

ACTN4-210, Transcript of actinin alpha 4, humanhuman

TSL 1 (best)

Gene ACTN4, Length 1,729 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-210ENST00000588618 DNASE2O00115 360 aaPredicted RBP17.07■□□□□ 0.32
ACTN4-210ENST00000588618 PPT1P50897 306 aa17.07■□□□□ 0.32
ACTN4-210ENST00000588618 CD300EQ496F6 205 aaPredicted RBP17.07■□□□□ 0.32
ACTN4-210ENST00000588618 H3BTX0 84 aa17.07■□□□□ 0.32
ACTN4-210ENST00000588618 FAM90A2PQ658T7 463 aa17.07■□□□□ 0.32
ACTN4-210ENST00000588618 ZNF586Q9NXT0 402 aa17.07■□□□□ 0.32
ACTN4-210ENST00000588618 A0A087X0K7 114 aa17.06■□□□□ 0.32
ACTN4-210ENST00000588618 IFNA1P01562 189 aa17.06■□□□□ 0.32
ACTN4-210ENST00000588618 TMEM61Q8N0U2 210 aa17.06■□□□□ 0.32
ACTN4-210ENST00000588618 GBGT1Q8N5D6 347 aa17.06■□□□□ 0.32
ACTN4-210ENST00000588618 GNG13Q9P2W3 67 aa17.06■□□□□ 0.32
ACTN4-210ENST00000588618 TRBV19A0A075B6N1 114 aa17.05■□□□□ 0.32
ACTN4-210ENST00000588618 TRAV25A0A0B4J276 109 aa17.05■□□□□ 0.32
ACTN4-210ENST00000588618 PDE6HQ13956 83 aa17.05■□□□□ 0.32
ACTN4-210ENST00000588618 SUN5Q8TC36 379 aa17.05■□□□□ 0.32
ACTN4-210ENST00000588618 IGLV1-51P01701 117 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 TFPI2P48307 235 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 UBE2G2P60604 165 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 PRR31Q5SQ13 230 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 SAMD13Q5VXD3 122 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 WFDC3Q8IUB2 231 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 OR2K2Q8NGT1 345 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 MS4A6AQ9H2W1 248 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 MANBALQ9NQG1 85 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 TSPAN4O14817 238 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 RANP62826 216 aaKnown RBP17.04■□□□□ 0.32
ACTN4-210ENST00000588618 LCN12Q6JVE5 192 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 C16orf92Q96LL3 132 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 SLC50A1Q9BRV3 221 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 GPR61Q9BZJ8 451 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 AAMDCQ9H7C9 122 aa17.04■□□□□ 0.32
ACTN4-210ENST00000588618 PSG9Q00887 426 aa17.03■□□□□ 0.32
ACTN4-210ENST00000588618 GUCA2BQ16661 112 aa17.03■□□□□ 0.32
ACTN4-210ENST00000588618 SLC17A3O00476 420 aa17.02■□□□□ 0.32
ACTN4-210ENST00000588618 IGLL1P15814 213 aa17.02■□□□□ 0.32
ACTN4-210ENST00000588618 SPAG8Q99932 426 aaPredicted RBP17.02■□□□□ 0.32
ACTN4-210ENST00000588618 DNHD1Q96M86 4753 aa17.02■□□□□ 0.31
ACTN4-210ENST00000588618 SORL1Q92673 2214 aa17.02■□□□□ 0.31
ACTN4-210ENST00000588618 ZNF253O75346 499 aa17.01■□□□□ 0.31
ACTN4-210ENST00000588618 NDUFB4O95168 129 aa17.01■□□□□ 0.31
ACTN4-210ENST00000588618 ID1P41134 155 aa17.01■□□□□ 0.31
ACTN4-210ENST00000588618 CST9LP1Q5W188 147 aa17.01■□□□□ 0.31
ACTN4-210ENST00000588618 YTHDF2Q9Y5A9 579 aaKnown RBP17.01■□□□□ 0.31
ACTN4-210ENST00000588618 LYPD1Q8N2G4 141 aa17.01■□□□□ 0.31
ACTN4-210ENST00000588618 NKX6-2Q9C056 277 aaPredicted RBP17.01■□□□□ 0.31
ACTN4-210ENST00000588618 A0A1W2PRE2 83 aa17■□□□□ 0.31
ACTN4-210ENST00000588618 OR4C46A6NHA9 309 aa17■□□□□ 0.31
ACTN4-210ENST00000588618 PAGE4O60829 102 aa17■□□□□ 0.31
ACTN4-210ENST00000588618 TAGLN2P37802 199 aaKnown RBP17■□□□□ 0.31
ACTN4-210ENST00000588618 HAGHQ16775 308 aa17■□□□□ 0.31
ACTN4-210ENST00000588618 Q9H3A6 140 aa17■□□□□ 0.31
ACTN4-210ENST00000588618 ZNF331Q9NQX6 463 aaPredicted RBP17■□□□□ 0.31
ACTN4-210ENST00000588618 ARL2-SNX15V9GYD0 113 aa17■□□□□ 0.31
ACTN4-210ENST00000588618 SNRPD3P62318 126 aaKnown RBP16.99■□□□□ 0.31
ACTN4-210ENST00000588618 PMS2P11Q13670 270 aa16.99■□□□□ 0.31
ACTN4-210ENST00000588618 DCANP1Q8TF63 244 aa16.99■□□□□ 0.31
ACTN4-210ENST00000588618 EIF5A2Q9GZV4 153 aaKnown RBP16.99■□□□□ 0.31
ACTN4-210ENST00000588618 TRAV2A0A0B4J234 112 aa16.99■□□□□ 0.31
ACTN4-210ENST00000588618 IZUMO1RA6ND01 250 aa16.99■□□□□ 0.31
ACTN4-210ENST00000588618 FAM74A7A6NL05 159 aa16.99■□□□□ 0.31
ACTN4-210ENST00000588618 ISLRO14498 428 aa16.99■□□□□ 0.31
ACTN4-210ENST00000588618 RARRES2Q99969 163 aa16.99■□□□□ 0.31
ACTN4-210ENST00000588618 CLEC5AQ9NY25 188 aa16.99■□□□□ 0.31
ACTN4-210ENST00000588618 BCL2P10415 239 aa16.98■□□□□ 0.31
ACTN4-210ENST00000588618 IGFL4Q6B9Z1 124 aa16.98■□□□□ 0.31
ACTN4-210ENST00000588618 EXOC3-AS1Q8N2X6 119 aa16.98■□□□□ 0.31
ACTN4-210ENST00000588618 CMTM2Q8TAZ6 248 aa16.98■□□□□ 0.31
ACTN4-210ENST00000588618 OTORQ9NRC9 128 aa16.98■□□□□ 0.31
ACTN4-210ENST00000588618 LINC00862A6NCI5 91 aa16.97■□□□□ 0.31
ACTN4-210ENST00000588618 PGPA6NDG6 321 aa16.97■□□□□ 0.31
ACTN4-210ENST00000588618 RBFOX3A6NFN3 312 aa16.97■□□□□ 0.31
ACTN4-210ENST00000588618 K7EQG2 157 aa16.97■□□□□ 0.31
ACTN4-210ENST00000588618 SOCS3O14543 225 aa16.97■□□□□ 0.31
ACTN4-210ENST00000588618 SUMO1P63165 101 aaKnown RBP16.97■□□□□ 0.31
ACTN4-210ENST00000588618 SRSF3P84103 164 aaKnown RBP16.97■□□□□ 0.31
ACTN4-210ENST00000588618 ICAM4Q14773 271 aa16.97■□□□□ 0.31
ACTN4-210ENST00000588618 LINC00052Q96N35 136 aa16.97■□□□□ 0.31
ACTN4-210ENST00000588618 FAM210AQ96ND0 272 aa16.97■□□□□ 0.31
ACTN4-210ENST00000588618 GGTLC3B5MD39 225 aa16.96■□□□□ 0.31
ACTN4-210ENST00000588618 C11orf94C9JXX5 98 aa16.96■□□□□ 0.31
ACTN4-210ENST00000588618 ATP5G3P48201 142 aa16.96■□□□□ 0.31
ACTN4-210ENST00000588618 TOR2AQ5JU69 321 aa16.96■□□□□ 0.31
ACTN4-210ENST00000588618 TXNDC17Q9BRA2 123 aa16.96■□□□□ 0.31
ACTN4-210ENST00000588618 VAX2Q9UIW0 290 aa16.96■□□□□ 0.31
ACTN4-210ENST00000588618 TRAV8-2A0A0B4J237 113 aa16.96■□□□□ 0.3
ACTN4-210ENST00000588618 LOC102723971A0A1B0GUV8 181 aa16.96■□□□□ 0.3
ACTN4-210ENST00000588618 HLA-DMBP28068 263 aa16.96■□□□□ 0.3
ACTN4-210ENST00000588618 CSN1S1P47710 185 aa16.96■□□□□ 0.3
ACTN4-210ENST00000588618 RNF182Q8N6D2 247 aa16.96■□□□□ 0.3
ACTN4-210ENST00000588618 MED9Q9NWA0 146 aa16.96■□□□□ 0.3
ACTN4-210ENST00000588618 SLC25A5P05141 298 aaKnown RBP16.95■□□□□ 0.3
ACTN4-210ENST00000588618 ZNF688P0C7X2 276 aa16.95■□□□□ 0.3
ACTN4-210ENST00000588618 MEF2BQ02080 365 aaPredicted RBP16.95■□□□□ 0.3
ACTN4-210ENST00000588618 PRELID1Q9Y255 219 aa16.95■□□□□ 0.3
ACTN4-210ENST00000588618 PRB4P10163 310 aaPredicted RBP16.94■□□□□ 0.3
ACTN4-210ENST00000588618 PSMG4Q5JS54 123 aa16.93■□□□□ 0.3
ACTN4-210ENST00000588618 FAM24BQ8N5W8 94 aa16.93■□□□□ 0.3
ACTN4-210ENST00000588618 ZNF738Q8NE65 137 aa16.93■□□□□ 0.3
ACTN4-210ENST00000588618 RXFP4Q8TDU9 374 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 202.1 ms