RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 CTDSP2O14595 271 aa4.12□□□□□ -1.75
TPM4-210ENST00000588507 RBFOX2O43251 390 aaKnown RBP eCLIP4.12□□□□□ -1.75
TPM4-210ENST00000588507 SPINK4O60575 86 aa4.12□□□□□ -1.75
TPM4-210ENST00000588507 IFNA7P01567 189 aa4.12□□□□□ -1.75
TPM4-210ENST00000588507 IL4P05112 153 aa4.12□□□□□ -1.75
TPM4-210ENST00000588507 RCVRNP35243 200 aa4.12□□□□□ -1.75
TPM4-210ENST00000588507 NUP62P37198 522 aaPredicted RBP4.12□□□□□ -1.75
TPM4-210ENST00000588507 RPS19P39019 145 aaKnown RBP4.12□□□□□ -1.75
TPM4-210ENST00000588507 NKX2-5P52952 324 aaPredicted RBP4.12□□□□□ -1.75
TPM4-210ENST00000588507 WNT4P56705 351 aa4.12□□□□□ -1.75
TPM4-210ENST00000588507 C12orf73Q69YU5 71 aa4.12□□□□□ -1.75
TPM4-210ENST00000588507 NHLRC2Q8NBF2 726 aa4.12□□□□□ -1.75
TPM4-210ENST00000588507 OR4X1Q8NH49 305 aa4.12□□□□□ -1.75
TPM4-210ENST00000588507 DERL3Q96Q80 235 aa4.12□□□□□ -1.75
TPM4-210ENST00000588507 TMEM59Q9BXS4 323 aa4.12□□□□□ -1.75
TPM4-210ENST00000588507 MED28Q9H204 178 aa4.12□□□□□ -1.75
TPM4-210ENST00000588507 FGF20Q9NP95 211 aaPredicted RBP4.12□□□□□ -1.75
TPM4-210ENST00000588507 MRPS18AQ9NVS2 196 aaKnown RBP4.12□□□□□ -1.75
TPM4-210ENST00000588507 CKLFQ9UBR5 152 aa4.12□□□□□ -1.75
TPM4-210ENST00000588507 PFDN2Q9UHV9 154 aa4.12□□□□□ -1.75
TPM4-210ENST00000588507 IGHV3-64A0A075B6Q5 118 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 TRDV1A0A1B0GX56 115 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 USP17L23D6RBM5 183 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 INMT-MINDY4F8WBC2 141 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 LYRM1O43325 122 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 TMEM127O75204 238 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 HLA-DQB1P01920 261 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 PI3P19957 117 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 HTR2BP41595 481 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 MEOX2P50222 304 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 RRAS2P62070 204 aaPredicted RBP4.11□□□□□ -1.75
TPM4-210ENST00000588507 IL18Q14116 193 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 IQCF2Q8IXL9 164 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 TMEM75Q8N9X5 138 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 DEDD2Q8WXF8 326 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 SLC25A38Q96DW6 304 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 MRPL48Q96GC5 212 aaKnown RBP4.11□□□□□ -1.75
TPM4-210ENST00000588507 AMBNQ9NP70 447 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 TXNL4BQ9NX01 149 aaKnown RBP4.11□□□□□ -1.75
TPM4-210ENST00000588507 FKBP11Q9NYL4 201 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 MRPL36Q9P0J6 103 aaKnown RBP4.11□□□□□ -1.75
TPM4-210ENST00000588507 LSM2Q9Y333 95 aaKnown RBP4.11□□□□□ -1.75
TPM4-210ENST00000588507 V9GYH0 126 aa4.11□□□□□ -1.75
TPM4-210ENST00000588507 TRAV8-7A0A075B6U6 113 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 LINC00862A6NCI5 91 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 E9PI62 339 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 ATG12O94817 140 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 UBBP0CG47 229 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 ANXA3P12429 323 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 TGFBR1P36897 503 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 RFX2P48378 723 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 YPEL3P61236 119 aaPredicted RBP4.1□□□□□ -1.75
TPM4-210ENST00000588507 ERHP84090 104 aaKnown RBP4.1□□□□□ -1.75
TPM4-210ENST00000588507 HIST1H1AQ02539 215 aaPredicted RBP4.1□□□□□ -1.75
TPM4-210ENST00000588507 CCDC58Q4VC31 144 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 ZNF680Q8NEM1 530 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 SLC24A4Q8NFF2 622 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 OR52I1Q8NGK6 324 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 LRRC20Q8TCA0 184 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 ZNF431Q8TF32 576 aaPredicted RBP4.1□□□□□ -1.75
TPM4-210ENST00000588507 C15orf40Q8WUR7 153 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 PGLYRP3Q96LB9 341 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 DNAJC30Q96LL9 226 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 SDHCQ99643 169 aaPredicted RBP4.1□□□□□ -1.75
TPM4-210ENST00000588507 MARVELD1Q9BSK0 173 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 KRTAP3-3Q9BYR6 98 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 KRTAP3-2Q9BYR7 98 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 PRNDQ9UKY0 176 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 TMA7Q9Y2S6 64 aaKnown RBP4.1□□□□□ -1.75
TPM4-210ENST00000588507 OR2W1Q9Y3N9 320 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 ALG5Q9Y673 324 aa4.1□□□□□ -1.75
TPM4-210ENST00000588507 IGLV7-46A0A075B6I9 117 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 A0A0A6YYD4 124 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 LOC100131303A0A0U1RQF7 123 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 LINC00854A0A1B0GVQ3 168 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 NAP1L6A6NFF2 107 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 TOMM40O96008 361 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 PFN1P07737 140 aaKnown RBP4.09□□□□□ -1.75
TPM4-210ENST00000588507 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 GATA1P15976 413 aaPredicted RBP4.09□□□□□ -1.75
TPM4-210ENST00000588507 RPL13AP40429 203 aaKnown RBP4.09□□□□□ -1.75
TPM4-210ENST00000588507 UBE2D1P51668 147 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 AP3S2P59780 193 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 ERVK-16P61578 105 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 MXD1Q05195 221 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 BAK1Q16611 211 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 VWC2Q2TAL6 325 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 C22orf42Q6IC83 251 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 CNIH2Q6PI25 160 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 C11orf72Q8NBR9 251 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 OR1S2Q8NGQ3 325 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 OR5H6Q8NGV6 325 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 PYGO2Q9BRQ0 406 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 MLST8Q9BVC4 326 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 PLEKHA2Q9HB19 425 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 MCUBQ9NWR8 336 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 COMMD3Q9UBI1 195 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 PRELID1Q9Y255 219 aa4.09□□□□□ -1.75
TPM4-210ENST00000588507 KLF12Q9Y4X4 402 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms