RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 TMEM167BQ9NRX6 74 aa10.63□□□□□ -0.71
CCDC130-208ENST00000588071 ZNF586Q9NXT0 402 aa10.63□□□□□ -0.71
CCDC130-208ENST00000588071 H3BQ15 152 aa10.62□□□□□ -0.71
CCDC130-208ENST00000588071 IGLC2P0DOY2 106 aa10.62□□□□□ -0.71
CCDC130-208ENST00000588071 RAB14P61106 215 aa10.62□□□□□ -0.71
CCDC130-208ENST00000588071 OXLD1Q5BKU9 147 aa10.62□□□□□ -0.71
CCDC130-208ENST00000588071 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.62□□□□□ -0.71
CCDC130-208ENST00000588071 C16orf92Q96LL3 132 aa10.62□□□□□ -0.71
CCDC130-208ENST00000588071 C17orf77Q96MU5 243 aa10.62□□□□□ -0.71
CCDC130-208ENST00000588071 SPAG8Q99932 426 aaPredicted RBP10.62□□□□□ -0.71
CCDC130-208ENST00000588071 A0A087X0K7 114 aa10.61□□□□□ -0.71
CCDC130-208ENST00000588071 TRAV1-1A0A0B4J248 108 aa10.61□□□□□ -0.71
CCDC130-208ENST00000588071 ID1P41134 155 aa10.61□□□□□ -0.71
CCDC130-208ENST00000588071 SAMD13Q5VXD3 122 aa10.61□□□□□ -0.71
CCDC130-208ENST00000588071 TRBV19A0A075B6N1 114 aa10.6□□□□□ -0.71
CCDC130-208ENST00000588071 OR4C46A6NHA9 309 aa10.6□□□□□ -0.71
CCDC130-208ENST00000588071 PSMB3P49720 205 aa10.6□□□□□ -0.71
CCDC130-208ENST00000588071 RANP62826 216 aaKnown RBP10.6□□□□□ -0.71
CCDC130-208ENST00000588071 PSG9Q00887 426 aa10.6□□□□□ -0.71
CCDC130-208ENST00000588071 PCNPQ8WW12 178 aaKnown RBP10.6□□□□□ -0.71
CCDC130-208ENST00000588071 SLC50A1Q9BRV3 221 aa10.6□□□□□ -0.71
CCDC130-208ENST00000588071 SORL1Q92673 2214 aa10.6□□□□□ -0.71
CCDC130-208ENST00000588071 TRAV2A0A0B4J234 112 aa10.59□□□□□ -0.71
CCDC130-208ENST00000588071 K7EQG2 157 aa10.59□□□□□ -0.71
CCDC130-208ENST00000588071 PPT1P50897 306 aa10.59□□□□□ -0.71
CCDC130-208ENST00000588071 SNRPD3P62318 126 aaKnown RBP10.59□□□□□ -0.71
CCDC130-208ENST00000588071 PDE6HQ13956 83 aa10.59□□□□□ -0.71
CCDC130-208ENST00000588071 DCANP1Q8TF63 244 aa10.59□□□□□ -0.71
CCDC130-208ENST00000588071 LINC00052Q96N35 136 aa10.59□□□□□ -0.71
CCDC130-208ENST00000588071 ZMAT5Q9UDW3 170 aaKnown RBP10.59□□□□□ -0.71
CCDC130-208ENST00000588071 ISLRO14498 428 aa10.58□□□□□ -0.72
CCDC130-208ENST00000588071 WIPF1O43516 503 aa10.58□□□□□ -0.72
CCDC130-208ENST00000588071 ZNF253O75346 499 aa10.58□□□□□ -0.72
CCDC130-208ENST00000588071 UBE2G2P60604 165 aa10.58□□□□□ -0.72
CCDC130-208ENST00000588071 CCL20P78556 96 aa10.58□□□□□ -0.72
CCDC130-208ENST00000588071 IGFL4Q6B9Z1 124 aa10.58□□□□□ -0.72
CCDC130-208ENST00000588071 SUN5Q8TC36 379 aa10.58□□□□□ -0.72
CCDC130-208ENST00000588071 AAMDCQ9H7C9 122 aa10.58□□□□□ -0.72
CCDC130-208ENST00000588071 ZNF331Q9NQX6 463 aaPredicted RBP10.58□□□□□ -0.72
CCDC130-208ENST00000588071 ZNF256Q9Y2P7 627 aaPredicted RBP10.58□□□□□ -0.72
CCDC130-208ENST00000588071 PGPA6NDG6 321 aa10.57□□□□□ -0.72
CCDC130-208ENST00000588071 G3V4G9 280 aa10.57□□□□□ -0.72
CCDC130-208ENST00000588071 SLC17A3O00476 420 aa10.57□□□□□ -0.72
CCDC130-208ENST00000588071 NDUFB4O95168 129 aa10.57□□□□□ -0.72
CCDC130-208ENST00000588071 NMBP08949 121 aa10.57□□□□□ -0.72
CCDC130-208ENST00000588071 CMC4P56277 68 aaPredicted RBP10.57□□□□□ -0.72
CCDC130-208ENST00000588071 CST9LP1Q5W188 147 aa10.57□□□□□ -0.72
CCDC130-208ENST00000588071 LYPD1Q8N2G4 141 aa10.57□□□□□ -0.72
CCDC130-208ENST00000588071 EXOC3-AS1Q8N2X6 119 aa10.57□□□□□ -0.72
CCDC130-208ENST00000588071 Q9H3A6 140 aa10.57□□□□□ -0.72
CCDC130-208ENST00000588071 CLEC5AQ9NY25 188 aa10.57□□□□□ -0.72
CCDC130-208ENST00000588071 GNG13Q9P2W3 67 aa10.57□□□□□ -0.72
CCDC130-208ENST00000588071 NOTCH3Q9UM47 2321 aa10.57□□□□□ -0.72
CCDC130-208ENST00000588071 TRAV8-2A0A0B4J237 113 aa10.56□□□□□ -0.72
CCDC130-208ENST00000588071 A0A1W2PRE2 83 aa10.56□□□□□ -0.72
CCDC130-208ENST00000588071 SOCS3O14543 225 aa10.56□□□□□ -0.72
CCDC130-208ENST00000588071 PAGE4O60829 102 aa10.56□□□□□ -0.72
CCDC130-208ENST00000588071 IFNA1P01562 189 aa10.56□□□□□ -0.72
CCDC130-208ENST00000588071 ZNF688P0C7X2 276 aa10.56□□□□□ -0.72
CCDC130-208ENST00000588071 ICAM4Q14773 271 aa10.56□□□□□ -0.72
CCDC130-208ENST00000588071 PSG3Q16557 428 aa10.56□□□□□ -0.72
CCDC130-208ENST00000588071 BEAN1Q3B7T3 259 aa10.56□□□□□ -0.72
CCDC130-208ENST00000588071 GTSCR1Q86UQ5 136 aa10.56□□□□□ -0.72
CCDC130-208ENST00000588071 FAM24BQ8N5W8 94 aa10.56□□□□□ -0.72
CCDC130-208ENST00000588071 RNF182Q8N6D2 247 aa10.56□□□□□ -0.72
CCDC130-208ENST00000588071 LYPD6BQ8NI32 183 aa10.56□□□□□ -0.72
CCDC130-208ENST00000588071 MANBALQ9NQG1 85 aa10.56□□□□□ -0.72
CCDC130-208ENST00000588071 OTORQ9NRC9 128 aa10.56□□□□□ -0.72
CCDC130-208ENST00000588071 FAM74A7A6NL05 159 aa10.55□□□□□ -0.72
CCDC130-208ENST00000588071 HLA-DMBP28068 263 aa10.55□□□□□ -0.72
CCDC130-208ENST00000588071 CSN1S1P47710 185 aa10.55□□□□□ -0.72
CCDC130-208ENST00000588071 CD81P60033 236 aa10.55□□□□□ -0.72
CCDC130-208ENST00000588071 SUMO1P63165 101 aaKnown RBP10.55□□□□□ -0.72
CCDC130-208ENST00000588071 PSMG4Q5JS54 123 aa10.55□□□□□ -0.72
CCDC130-208ENST00000588071 SAMD5Q5TGI4 173 aa10.55□□□□□ -0.72
CCDC130-208ENST00000588071 ZNF738Q8NE65 137 aa10.55□□□□□ -0.72
CCDC130-208ENST00000588071 CMTM2Q8TAZ6 248 aa10.55□□□□□ -0.72
CCDC130-208ENST00000588071 C20orf173Q96LM9 149 aa10.55□□□□□ -0.72
CCDC130-208ENST00000588071 NKX6-2Q9C056 277 aaPredicted RBP10.55□□□□□ -0.72
CCDC130-208ENST00000588071 PRELID1Q9Y255 219 aa10.55□□□□□ -0.72
CCDC130-208ENST00000588071 TRRAPQ9Y4A5 3859 aa10.55□□□□□ -0.72
CCDC130-208ENST00000588071 OR11H12B2RN74 326 aa10.54□□□□□ -0.72
CCDC130-208ENST00000588071 RGS13O14921 159 aa10.54□□□□□ -0.72
CCDC130-208ENST00000588071 SLC25A5P05141 298 aaKnown RBP10.54□□□□□ -0.72
CCDC130-208ENST00000588071 DEFB131AP59861 70 aa10.54□□□□□ -0.72
CCDC130-208ENST00000588071 KRTAP10-11P60412 298 aa10.54□□□□□ -0.72
CCDC130-208ENST00000588071 EGFEM1PQ0D2K5 195 aa10.54□□□□□ -0.72
CCDC130-208ENST00000588071 HAGHQ16775 308 aa10.54□□□□□ -0.72
CCDC130-208ENST00000588071 CLLU1Q5K131 121 aa10.54□□□□□ -0.72
CCDC130-208ENST00000588071 RXFP4Q8TDU9 374 aa10.54□□□□□ -0.72
CCDC130-208ENST00000588071 YTHDF2Q9Y5A9 579 aaKnown RBP10.54□□□□□ -0.72
CCDC130-208ENST00000588071 ZNF705FA8MVS1 300 aaPredicted RBP10.53□□□□□ -0.72
CCDC130-208ENST00000588071 CD7P09564 240 aa10.53□□□□□ -0.72
CCDC130-208ENST00000588071 TAGLN2P37802 199 aaKnown RBP10.53□□□□□ -0.72
CCDC130-208ENST00000588071 PMS2P11Q13670 270 aa10.53□□□□□ -0.72
CCDC130-208ENST00000588071 MAP6D1Q9H9H5 199 aa10.53□□□□□ -0.72
CCDC130-208ENST00000588071 ARL2-SNX15V9GYD0 113 aa10.53□□□□□ -0.72
CCDC130-208ENST00000588071 RBFOX3A6NFN3 312 aa10.52□□□□□ -0.73
CCDC130-208ENST00000588071 M0R3E3 92 aa10.52□□□□□ -0.73
CCDC130-208ENST00000588071 EBLN2Q6P2I7 272 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms