RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 MAP6D1Q9H9H5 199 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 ZNF586Q9NXT0 402 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 TMEM14CQ9P0S9 112 aa7.96□□□□□ -1.14
SMARCA4-213ENST00000587988 OR10J4P0C629 311 aa7.95□□□□□ -1.14
SMARCA4-213ENST00000587988 PRB4P10163 310 aaPredicted RBP7.95□□□□□ -1.14
SMARCA4-213ENST00000587988 HIST1H1EP10412 219 aaKnown RBP7.95□□□□□ -1.14
SMARCA4-213ENST00000587988 HLA-DMBP28068 263 aa7.95□□□□□ -1.14
SMARCA4-213ENST00000587988 FHITP49789 147 aa7.95□□□□□ -1.14
SMARCA4-213ENST00000587988 DEFB131AP59861 70 aa7.95□□□□□ -1.14
SMARCA4-213ENST00000587988 FXYD5Q96DB9 178 aa7.95□□□□□ -1.14
SMARCA4-213ENST00000587988 SAT2Q96F10 170 aaPredicted RBP7.95□□□□□ -1.14
SMARCA4-213ENST00000587988 C16orf92Q96LL3 132 aa7.95□□□□□ -1.14
SMARCA4-213ENST00000587988 PAXXQ9BUH6 204 aa7.95□□□□□ -1.14
SMARCA4-213ENST00000587988 ACTR3CQ9C0K3 210 aaPredicted RBP7.95□□□□□ -1.14
SMARCA4-213ENST00000587988 HRH4Q9H3N8 390 aa7.95□□□□□ -1.14
SMARCA4-213ENST00000587988 OR7C2O60412 319 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 STAG3L2P0CL84 134 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 STAG3L3P0CL85 134 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 IGHV4-30-4P0DP06 118 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 C4BPBP20851 252 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 MEOX2P50222 304 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 TAS2R45P59539 299 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 DEFB1P60022 68 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 KHDC3LQ587J8 217 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 DEFB121Q5J5C9 76 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 PSMG4Q5JS54 123 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 RNF182Q8N6D2 247 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 BLNKQ8WV28 456 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 RNF141Q8WVD5 230 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 LINC00052Q96N35 136 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 FAM110AQ9BQ89 295 aa7.94□□□□□ -1.14
SMARCA4-213ENST00000587988 NBEAL1Q6ZS30 2694 aa7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 TRBV19A0A075B6N1 114 aa7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 CTXND1A0A1B0GTU2 59 aa7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 RBMY1BA6NDE4 496 aaKnown RBP7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 RBMY1EA6NEQ0 496 aaKnown RBP7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 ISLRO14498 428 aa7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 NDUFB4O95168 129 aa7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 NBEAP1P0C6P0 100 aa7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 RBMY1DP0C7P1 496 aaKnown RBP7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 ARL14EPLP0DKL9 152 aa7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 ID1P41134 155 aa7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 PSMB3P49720 205 aa7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 SNRPD3P62318 126 aaKnown RBP7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 LCN15Q6UWW0 184 aa7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 LRRC20Q8TCA0 184 aa7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 MRAPQ8TCY5 172 aa7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 SRD5A3Q9H8P0 318 aa7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 ZNF331Q9NQX6 463 aaPredicted RBP7.93□□□□□ -1.14
SMARCA4-213ENST00000587988 AGRNO00468 2067 aa7.92□□□□□ -1.14
SMARCA4-213ENST00000587988 KNCNA6PVL3 124 aa7.92□□□□□ -1.14
SMARCA4-213ENST00000587988 UMAD1C9J7I0 102 aa7.92□□□□□ -1.14
SMARCA4-213ENST00000587988 FGF8P55075 233 aaPredicted RBP7.92□□□□□ -1.14
SMARCA4-213ENST00000587988 CMC4P56277 68 aaPredicted RBP7.92□□□□□ -1.14
SMARCA4-213ENST00000587988 UBE2L3P68036 154 aaKnown RBP7.92□□□□□ -1.14
SMARCA4-213ENST00000587988 GUK1Q16774 197 aa7.92□□□□□ -1.14
SMARCA4-213ENST00000587988 FAM74A1Q5RGS3 127 aa7.92□□□□□ -1.14
SMARCA4-213ENST00000587988 GDF5OSQ5U4N7 250 aa7.92□□□□□ -1.14
SMARCA4-213ENST00000587988 PQLC2Q6ZP29 291 aa7.92□□□□□ -1.14
SMARCA4-213ENST00000587988 FAM213BQ8TBF2 198 aa7.92□□□□□ -1.14
SMARCA4-213ENST00000587988 PHYHIPLQ96FC7 376 aa7.92□□□□□ -1.14
SMARCA4-213ENST00000587988 SLC50A1Q9BRV3 221 aa7.92□□□□□ -1.14
SMARCA4-213ENST00000587988 TMPRSS5Q9H3S3 457 aa7.92□□□□□ -1.14
SMARCA4-213ENST00000587988 ZNF705FA8MVS1 300 aaPredicted RBP7.91□□□□□ -1.14
SMARCA4-213ENST00000587988 A8MZ25 164 aa7.91□□□□□ -1.14
SMARCA4-213ENST00000587988 F6UB75 175 aa7.91□□□□□ -1.14
SMARCA4-213ENST00000587988 ZNF253O75346 499 aa7.91□□□□□ -1.14
SMARCA4-213ENST00000587988 GCHFRP30047 84 aa7.91□□□□□ -1.14
SMARCA4-213ENST00000587988 SULT1A2P50226 295 aa7.91□□□□□ -1.14
SMARCA4-213ENST00000587988 PSG3Q16557 428 aa7.91□□□□□ -1.14
SMARCA4-213ENST00000587988 SAMD13Q5VXD3 122 aa7.91□□□□□ -1.14
SMARCA4-213ENST00000587988 EIF5AL1Q6IS14 154 aaKnown RBP7.91□□□□□ -1.14
SMARCA4-213ENST00000587988 ALKAL2Q6UX46 152 aa7.91□□□□□ -1.14
SMARCA4-213ENST00000587988 EXOC3-AS1Q8N2X6 119 aa7.91□□□□□ -1.14
SMARCA4-213ENST00000587988 TUBA4BQ9H853 241 aa7.91□□□□□ -1.14
SMARCA4-213ENST00000587988 MAP1LC3B2A6NCE7 125 aa7.9□□□□□ -1.14
SMARCA4-213ENST00000587988 M0R3E3 92 aa7.9□□□□□ -1.14
SMARCA4-213ENST00000587988 CXorf1O96002 111 aa7.9□□□□□ -1.14
SMARCA4-213ENST00000587988 FRMD6-AS1P0C7T7 363 aa7.9□□□□□ -1.14
SMARCA4-213ENST00000587988 RPL35AP18077 110 aaKnown RBP7.9□□□□□ -1.14
SMARCA4-213ENST00000587988 RANP62826 216 aaKnown RBP7.9□□□□□ -1.14
SMARCA4-213ENST00000587988 PDE6HQ13956 83 aa7.9□□□□□ -1.14
SMARCA4-213ENST00000587988 ACTL10Q5JWF8 245 aa7.9□□□□□ -1.14
SMARCA4-213ENST00000587988 DPPA3Q6W0C5 159 aa7.9□□□□□ -1.14
SMARCA4-213ENST00000587988 LINC00322Q6ZN03 302 aaPredicted RBP7.9□□□□□ -1.14
SMARCA4-213ENST00000587988 SUN5Q8TC36 379 aa7.9□□□□□ -1.14
SMARCA4-213ENST00000587988 MBD3L1Q8WWY6 194 aa7.9□□□□□ -1.14
SMARCA4-213ENST00000587988 MAP1LC3BQ9GZQ8 125 aa7.9□□□□□ -1.14
SMARCA4-213ENST00000587988 A0A1B0GV50 99 aa7.89□□□□□ -1.15
SMARCA4-213ENST00000587988 PRAC2D3DTV9 90 aa7.89□□□□□ -1.15
SMARCA4-213ENST00000587988 ZNF705DP0CH99 300 aaPredicted RBP7.89□□□□□ -1.15
SMARCA4-213ENST00000587988 ZNF705BP0CI00 300 aaPredicted RBP7.89□□□□□ -1.15
SMARCA4-213ENST00000587988 PSG9Q00887 426 aa7.89□□□□□ -1.15
SMARCA4-213ENST00000587988 ICAM4Q14773 271 aa7.89□□□□□ -1.15
SMARCA4-213ENST00000587988 FOXI2Q6ZQN5 318 aa7.89□□□□□ -1.15
SMARCA4-213ENST00000587988 IQCF2Q8IXL9 164 aa7.89□□□□□ -1.15
SMARCA4-213ENST00000587988 ZNF738Q8NE65 137 aa7.89□□□□□ -1.15
SMARCA4-213ENST00000587988 SFT2D1Q8WV19 159 aa7.89□□□□□ -1.15
SMARCA4-213ENST00000587988 Q9H3A6 140 aa7.89□□□□□ -1.15
SMARCA4-213ENST00000587988 SAV1Q9H4B6 383 aaPredicted RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms