RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 IGHV1-8P0DP01 117 aa13.01□□□□□ -0.33
RANBP3-209ENST00000587411 PAX8Q06710 450 aa13.01□□□□□ -0.33
RANBP3-209ENST00000587411 LYZL1Q6UWQ5 148 aa13.01□□□□□ -0.33
RANBP3-209ENST00000587411 TNFRSF14Q92956 283 aa13.01□□□□□ -0.33
RANBP3-209ENST00000587411 TNFRSF13BO14836 293 aaPredicted RBP13.01□□□□□ -0.33
RANBP3-209ENST00000587411 IGKV1-17P01599 117 aa13.01□□□□□ -0.33
RANBP3-209ENST00000587411 THBDP07204 575 aa13.01□□□□□ -0.33
RANBP3-209ENST00000587411 LOXP28300 417 aaPredicted RBP13.01□□□□□ -0.33
RANBP3-209ENST00000587411 PLA2G2CQ5R387 149 aa13.01□□□□□ -0.33
RANBP3-209ENST00000587411 PPP1R27Q86WC6 154 aa13.01□□□□□ -0.33
RANBP3-209ENST00000587411 PIFOQ8TCI5 191 aa13.01□□□□□ -0.33
RANBP3-209ENST00000587411 ABHD17AQ96GS6 310 aa13.01□□□□□ -0.33
RANBP3-209ENST00000587411 FAM215AQ9Y5M1 114 aa13.01□□□□□ -0.33
RANBP3-209ENST00000587411 TMEM189A5PLL7 270 aa13□□□□□ -0.33
RANBP3-209ENST00000587411 FABP2P12104 132 aa13□□□□□ -0.33
RANBP3-209ENST00000587411 AMN1Q8IY45 258 aa13□□□□□ -0.33
RANBP3-209ENST00000587411 INSIG2Q9Y5U4 225 aa13□□□□□ -0.33
RANBP3-209ENST00000587411 CNTFRP26992 372 aa13□□□□□ -0.33
RANBP3-209ENST00000587411 C1orf185Q5T7R7 199 aa13□□□□□ -0.33
RANBP3-209ENST00000587411 C17orf77Q96MU5 243 aa13□□□□□ -0.33
RANBP3-209ENST00000587411 SRSF8Q9BRL6 282 aaKnown RBP13□□□□□ -0.33
RANBP3-209ENST00000587411 CADP27708 2225 aa13□□□□□ -0.33
RANBP3-209ENST00000587411 ZDBF2Q9HCK1 2354 aa12.99□□□□□ -0.33
RANBP3-209ENST00000587411 MRPL51Q4U2R6 128 aaKnown RBP12.99□□□□□ -0.33
RANBP3-209ENST00000587411 LYPD2Q6UXB3 125 aa12.99□□□□□ -0.33
RANBP3-209ENST00000587411 TMEM108Q6UXF1 575 aa12.99□□□□□ -0.33
RANBP3-209ENST00000587411 S100A7AQ86SG5 101 aa12.99□□□□□ -0.33
RANBP3-209ENST00000587411 TMEM213A2RRL7 107 aa12.99□□□□□ -0.33
RANBP3-209ENST00000587411 NMUP48645 174 aa12.99□□□□□ -0.33
RANBP3-209ENST00000587411 RAB37Q96AX2 223 aa12.99□□□□□ -0.33
RANBP3-209ENST00000587411 NAA38Q9BRA0 125 aaKnown RBP12.99□□□□□ -0.33
RANBP3-209ENST00000587411 KNTC1P50748 2209 aa12.98□□□□□ -0.33
RANBP3-209ENST00000587411 TECTAO75443 2155 aa12.98□□□□□ -0.33
RANBP3-209ENST00000587411 SHISA9B4DS77 424 aa12.98□□□□□ -0.33
RANBP3-209ENST00000587411 PDE6HQ13956 83 aa12.98□□□□□ -0.33
RANBP3-209ENST00000587411 ADIPOQQ15848 244 aa12.98□□□□□ -0.33
RANBP3-209ENST00000587411 SMIM13P0DJ93 91 aa12.98□□□□□ -0.33
RANBP3-209ENST00000587411 FAM27E3Q08E93 113 aa12.98□□□□□ -0.33
RANBP3-209ENST00000587411 SRSF6Q13247 344 aaKnown RBP12.98□□□□□ -0.33
RANBP3-209ENST00000587411 PLGLAQ15195 96 aa12.98□□□□□ -0.33
RANBP3-209ENST00000587411 ASCL2Q99929 193 aa12.98□□□□□ -0.33
RANBP3-209ENST00000587411 CTSZQ9UBR2 303 aa12.98□□□□□ -0.33
RANBP3-209ENST00000587411 MRPS12O15235 138 aaKnown RBP12.97□□□□□ -0.33
RANBP3-209ENST00000587411 NDUFS7O75251 213 aa12.97□□□□□ -0.33
RANBP3-209ENST00000587411 C22orf34Q6ZV56 151 aa12.97□□□□□ -0.33
RANBP3-209ENST00000587411 PCP2Q8IVA1 136 aa12.97□□□□□ -0.33
RANBP3-209ENST00000587411 C8orf49Q96NF6 230 aa12.97□□□□□ -0.33
RANBP3-209ENST00000587411 AAMDCQ9H7C9 122 aa12.97□□□□□ -0.33
RANBP3-209ENST00000587411 HIGD1BQ9P298 99 aa12.97□□□□□ -0.33
RANBP3-209ENST00000587411 KAAG1Q9UBP8 84 aa12.97□□□□□ -0.33
RANBP3-209ENST00000587411 FBLL1A6NHQ2 334 aaKnown RBP12.97□□□□□ -0.33
RANBP3-209ENST00000587411 SH2D1AO60880 128 aa12.97□□□□□ -0.33
RANBP3-209ENST00000587411 CKS2P33552 79 aa12.97□□□□□ -0.33
RANBP3-209ENST00000587411 COX8CQ7Z4L0 72 aa12.97□□□□□ -0.33
RANBP3-209ENST00000587411 CCL17Q92583 94 aa12.97□□□□□ -0.33
RANBP3-209ENST00000587411 CHTOPQ9Y3Y2 248 aaKnown RBP12.97□□□□□ -0.33
RANBP3-209ENST00000587411 CEACAM4O75871 244 aa12.96□□□□□ -0.33
RANBP3-209ENST00000587411 SAMD5Q5TGI4 173 aa12.96□□□□□ -0.33
RANBP3-209ENST00000587411 RNF125Q96EQ8 232 aa12.96□□□□□ -0.33
RANBP3-209ENST00000587411 ZNF491Q8N8L2 437 aa12.96□□□□□ -0.33
RANBP3-209ENST00000587411 IGHV1-3A0A0C4DH29 117 aa12.96□□□□□ -0.34
RANBP3-209ENST00000587411 M0R3E3 92 aa12.96□□□□□ -0.34
RANBP3-209ENST00000587411 TMSB15BA0A087X1C1 80 aa12.95□□□□□ -0.34
RANBP3-209ENST00000587411 K7EIM0 57 aa12.95□□□□□ -0.34
RANBP3-209ENST00000587411 CIDEAO60543 219 aa12.95□□□□□ -0.34
RANBP3-209ENST00000587411 NPYP01303 97 aa12.95□□□□□ -0.34
RANBP3-209ENST00000587411 IGLV1-47P01700 117 aa12.95□□□□□ -0.34
RANBP3-209ENST00000587411 TCTAP57738 103 aa12.95□□□□□ -0.34
RANBP3-209ENST00000587411 LINC01559Q495D7 138 aa12.95□□□□□ -0.34
RANBP3-209ENST00000587411 RNF5Q99942 180 aa12.95□□□□□ -0.34
RANBP3-209ENST00000587411 FBXL15Q9H469 300 aa12.95□□□□□ -0.34
RANBP3-209ENST00000587411 LINC01546A6NGU7 62 aa12.94□□□□□ -0.34
RANBP3-209ENST00000587411 IL4P05112 153 aa12.94□□□□□ -0.34
RANBP3-209ENST00000587411 FXYD7P58549 80 aa12.94□□□□□ -0.34
RANBP3-209ENST00000587411 DKK2Q9UBU2 259 aa12.94□□□□□ -0.34
RANBP3-209ENST00000587411 WI2-2373I1.2A0A1W2PRP0 233 aa12.94□□□□□ -0.34
RANBP3-209ENST00000587411 PRSS57Q6UWY2 283 aa12.94□□□□□ -0.34
RANBP3-209ENST00000587411 MAP1LC3AQ9H492 121 aa12.94□□□□□ -0.34
RANBP3-209ENST00000587411 FCGR2BP31994 310 aaPredicted RBP12.93□□□□□ -0.34
RANBP3-209ENST00000587411 RAB1BQ9H0U4 201 aa12.93□□□□□ -0.34
RANBP3-209ENST00000587411 ZMAT4Q9H898 229 aa12.93□□□□□ -0.34
RANBP3-209ENST00000587411 ARFGEF3Q5TH69 2177 aa12.93□□□□□ -0.34
RANBP3-209ENST00000587411 TWIST1Q15672 202 aa12.93□□□□□ -0.34
RANBP3-209ENST00000587411 DEFB109BQ30KR1 87 aa12.93□□□□□ -0.34
RANBP3-209ENST00000587411 PRSS33Q8NF86 280 aa12.93□□□□□ -0.34
RANBP3-209ENST00000587411 SELENOKQ9Y6D0 94 aa12.93□□□□□ -0.34
RANBP3-209ENST00000587411 TMEM238LA0A1B0GVL6 79 aa12.92□□□□□ -0.34
RANBP3-209ENST00000587411 BUB1B-PAK6H3BSN5 160 aa12.92□□□□□ -0.34
RANBP3-209ENST00000587411 GCSHP23434 173 aa12.92□□□□□ -0.34
RANBP3-209ENST00000587411 BCL6BQ8N143 479 aaPredicted RBP12.92□□□□□ -0.34
RANBP3-209ENST00000587411 BMI1P35226 326 aa12.92□□□□□ -0.34
RANBP3-209ENST00000587411 WFDC8Q8IUA0 241 aa12.92□□□□□ -0.34
RANBP3-209ENST00000587411 SMKR1H3BMG3 65 aa12.91□□□□□ -0.34
RANBP3-209ENST00000587411 VSTM5A8MXK1 200 aa12.91□□□□□ -0.34
RANBP3-209ENST00000587411 CNIH1O95406 144 aa12.91□□□□□ -0.34
RANBP3-209ENST00000587411 IGLC6P0CF74 106 aa12.91□□□□□ -0.34
RANBP3-209ENST00000587411 SCGB1A1P11684 91 aa12.91□□□□□ -0.34
RANBP3-209ENST00000587411 FCER1GP30273 86 aa12.91□□□□□ -0.34
RANBP3-209ENST00000587411 SRSF2Q01130 221 aaKnown RBP12.91□□□□□ -0.34
RANBP3-209ENST00000587411 ODF1Q14990 250 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms