RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 PRAC2D3DTV9 90 aa8.16□□□□□ -1.1
BRCA1-225ENST00000586385 CCNKO75909 580 aa8.16□□□□□ -1.1
BRCA1-225ENST00000586385 ANXA3P12429 323 aa8.16□□□□□ -1.1
BRCA1-225ENST00000586385 RPL7P18124 248 aaKnown RBP8.16□□□□□ -1.1
BRCA1-225ENST00000586385 CDKN1BP46527 198 aa8.16□□□□□ -1.1
BRCA1-225ENST00000586385 GFI1BQ5VTD9 330 aa8.16□□□□□ -1.1
BRCA1-225ENST00000586385 LYPD1Q8N2G4 141 aa8.16□□□□□ -1.1
BRCA1-225ENST00000586385 RPUSD4Q96CM3 377 aaKnown RBP8.16□□□□□ -1.1
BRCA1-225ENST00000586385 VSIG2Q96IQ7 327 aa8.16□□□□□ -1.1
BRCA1-225ENST00000586385 CIB3Q96Q77 187 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-225ENST00000586385 HIGD1AQ9Y241 93 aa8.16□□□□□ -1.1
BRCA1-225ENST00000586385 GAGE12BA1L429 117 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 H7BYZ3 331 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 HYPMO75409 117 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 MED6O75586 246 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 GAGE7O76087 117 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 IL5P05113 134 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 SNRPCP09234 159 aaKnown RBP8.15□□□□□ -1.1
BRCA1-225ENST00000586385 LINC00869P0C866 280 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 GAGE12FP0CL80 117 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 GAGE12GP0CL81 117 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 GAGE12IP0CL82 117 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 PPP1R1AQ13522 171 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 TMEM128Q5BJH2 165 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 TMED4Q7Z7H5 227 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 OR10J6PQ8NGY7 276 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 DYNC2LI1Q8TCX1 351 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 TRIM63Q969Q1 353 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 TMPRSS5Q9H3S3 457 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 ZNF331Q9NQX6 463 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-225ENST00000586385 RABL2BQ9UNT1 228 aa8.15□□□□□ -1.1
BRCA1-225ENST00000586385 MYCBP2O75592 4640 aa8.14□□□□□ -1.11
BRCA1-225ENST00000586385 A0A096LPF7 62 aa8.14□□□□□ -1.11
BRCA1-225ENST00000586385 LINC00854A0A1B0GVQ3 168 aa8.14□□□□□ -1.11
BRCA1-225ENST00000586385 H3BNG1 76 aa8.14□□□□□ -1.11
BRCA1-225ENST00000586385 SLC17A3O00476 420 aa8.14□□□□□ -1.11
BRCA1-225ENST00000586385 OR5G3P0C626 314 aa8.14□□□□□ -1.11
BRCA1-225ENST00000586385 INAFM2P0DMQ5 153 aa8.14□□□□□ -1.11
BRCA1-225ENST00000586385 VAMP1P23763 118 aa8.14□□□□□ -1.11
BRCA1-225ENST00000586385 RAP2BP61225 183 aa8.14□□□□□ -1.11
BRCA1-225ENST00000586385 RABL2AQ9UBK7 228 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-225ENST00000586385 STRAPQ9Y3F4 350 aaKnown RBP8.14□□□□□ -1.11
BRCA1-225ENST00000586385 TNFRSF18Q9Y5U5 241 aa8.14□□□□□ -1.11
BRCA1-225ENST00000586385 K7EPK0 472 aa8.13□□□□□ -1.11
BRCA1-225ENST00000586385 SFT2D2O95562 160 aa8.13□□□□□ -1.11
BRCA1-225ENST00000586385 HOXB5P09067 269 aa8.13□□□□□ -1.11
BRCA1-225ENST00000586385 TNFSF8P32971 234 aa8.13□□□□□ -1.11
BRCA1-225ENST00000586385 KRTAP10-1P60331 282 aa8.13□□□□□ -1.11
BRCA1-225ENST00000586385 POLR2GP62487 172 aaKnown RBP eCLIP8.13□□□□□ -1.11
BRCA1-225ENST00000586385 RPP30P78346 268 aaKnown RBP8.13□□□□□ -1.11
BRCA1-225ENST00000586385 ID3Q02535 119 aa8.13□□□□□ -1.11
BRCA1-225ENST00000586385 MORN5Q5VZ52 161 aa8.13□□□□□ -1.11
BRCA1-225ENST00000586385 Q6ZTI0 123 aa8.13□□□□□ -1.11
BRCA1-225ENST00000586385 C20orf144Q9BQM9 153 aa8.13□□□□□ -1.11
BRCA1-225ENST00000586385 PPP1R14DQ9NXH3 145 aa8.13□□□□□ -1.11
BRCA1-225ENST00000586385 CCDC59Q9P031 241 aaKnown RBP8.13□□□□□ -1.11
BRCA1-225ENST00000586385 RSL24D1Q9UHA3 163 aaKnown RBP8.13□□□□□ -1.11
BRCA1-225ENST00000586385 VPS13BQ7Z7G8 4022 aa8.13□□□□□ -1.11
BRCA1-225ENST00000586385 FLG2Q5D862 2391 aaPredicted RBP8.13□□□□□ -1.11
BRCA1-225ENST00000586385 SMCO3A2RU48 225 aa8.12□□□□□ -1.11
BRCA1-225ENST00000586385 H3BTX0 84 aa8.12□□□□□ -1.11
BRCA1-225ENST00000586385 ADAP1O75689 374 aa8.12□□□□□ -1.11
BRCA1-225ENST00000586385 CT45A10P0DMU9 189 aa8.12□□□□□ -1.11
BRCA1-225ENST00000586385 Q5VSD8 79 aa8.12□□□□□ -1.11
BRCA1-225ENST00000586385 SLIRPQ9GZT3 109 aaKnown RBP8.12□□□□□ -1.11
BRCA1-225ENST00000586385 ARL6Q9H0F7 186 aa8.12□□□□□ -1.11
BRCA1-225ENST00000586385 ARV1Q9H2C2 271 aa8.12□□□□□ -1.11
BRCA1-225ENST00000586385 PIGBOS1A0A0B4J2F0 54 aa8.11□□□□□ -1.11
BRCA1-225ENST00000586385 RLN2P04090 185 aa8.11□□□□□ -1.11
BRCA1-225ENST00000586385 DNAH10OSP0CZ25 163 aa8.11□□□□□ -1.11
BRCA1-225ENST00000586385 CXCL2P19875 107 aa8.11□□□□□ -1.11
BRCA1-225ENST00000586385 S100A7P31151 101 aa8.11□□□□□ -1.11
BRCA1-225ENST00000586385 RRAS2P62070 204 aaPredicted RBP8.11□□□□□ -1.11
BRCA1-225ENST00000586385 SELENOTP62341 195 aa8.11□□□□□ -1.11
BRCA1-225ENST00000586385 SLC38A11Q08AI6 406 aa8.11□□□□□ -1.11
BRCA1-225ENST00000586385 ARL16Q0P5N6 197 aa8.11□□□□□ -1.11
BRCA1-225ENST00000586385 DAZ2Q13117 558 aaKnown RBP8.11□□□□□ -1.11
BRCA1-225ENST00000586385 TMEM14EPQ6UXP3 125 aa8.11□□□□□ -1.11
BRCA1-225ENST00000586385 C11orf72Q8NBR9 251 aa8.11□□□□□ -1.11
BRCA1-225ENST00000586385 LRRC20Q8TCA0 184 aa8.11□□□□□ -1.11
BRCA1-225ENST00000586385 PGPEP1Q9NXJ5 209 aa8.11□□□□□ -1.11
BRCA1-225ENST00000586385 TRAV12-3A0A0B4J271 114 aa8.1□□□□□ -1.11
BRCA1-225ENST00000586385 FABP12A6NFH5 140 aa8.1□□□□□ -1.11
BRCA1-225ENST00000586385 H3BQ15 152 aa8.1□□□□□ -1.11
BRCA1-225ENST00000586385 J3KRW8 73 aa8.1□□□□□ -1.11
BRCA1-225ENST00000586385 IGLC2P0DOY2 106 aa8.1□□□□□ -1.11
BRCA1-225ENST00000586385 LCN15Q6UWW0 184 aa8.1□□□□□ -1.11
BRCA1-225ENST00000586385 CCDC28AQ8IWP9 274 aa8.1□□□□□ -1.11
BRCA1-225ENST00000586385 ZNF431Q8TF32 576 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-225ENST00000586385 TMEM37Q8WXS4 190 aa8.1□□□□□ -1.11
BRCA1-225ENST00000586385 SAT2Q96F10 170 aaPredicted RBP8.1□□□□□ -1.11
BRCA1-225ENST00000586385 C18orf15Q96N68 181 aa8.1□□□□□ -1.11
BRCA1-225ENST00000586385 PSENENQ9NZ42 101 aa8.1□□□□□ -1.11
BRCA1-225ENST00000586385 SNURFLB1AK76 121 aa8.09□□□□□ -1.11
BRCA1-225ENST00000586385 SSSCA1O60232 199 aa8.09□□□□□ -1.11
BRCA1-225ENST00000586385 METTL15P1P0C7V9 234 aa8.09□□□□□ -1.11
BRCA1-225ENST00000586385 ANXA7P20073 488 aaKnown RBP8.09□□□□□ -1.11
BRCA1-225ENST00000586385 OPCMLQ14982 345 aa8.09□□□□□ -1.11
BRCA1-225ENST00000586385 C4orf46Q504U0 113 aa8.09□□□□□ -1.11
BRCA1-225ENST00000586385 TEPPQ6URK8 271 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms