RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 VAMP1P23763 118 aa10.04□□□□□ -0.8
SDF2-202ENST00000585428 FAUP35544 74 aaKnown RBP10.04□□□□□ -0.8
SDF2-202ENST00000585428 CDKN1BP46527 198 aa10.04□□□□□ -0.8
SDF2-202ENST00000585428 RAP2BP61225 183 aa10.04□□□□□ -0.8
SDF2-202ENST00000585428 PPP1R1AQ13522 171 aa10.04□□□□□ -0.8
SDF2-202ENST00000585428 CLINT1Q14677 625 aa10.04□□□□□ -0.8
SDF2-202ENST00000585428 PATE2Q6UY27 113 aa10.04□□□□□ -0.8
SDF2-202ENST00000585428 SPATA12Q7Z6I5 190 aa10.04□□□□□ -0.8
SDF2-202ENST00000585428 LINC00612Q8N6U2 182 aa10.04□□□□□ -0.8
SDF2-202ENST00000585428 TRIM63Q969Q1 353 aa10.04□□□□□ -0.8
SDF2-202ENST00000585428 ZNF503Q96F45 646 aa10.04□□□□□ -0.8
SDF2-202ENST00000585428 UHRF2Q96PU4 802 aa10.04□□□□□ -0.8
SDF2-202ENST00000585428 KRTAP1-5Q9BYS1 174 aa10.04□□□□□ -0.8
SDF2-202ENST00000585428 H3BP45 60 aa10.03□□□□□ -0.8
SDF2-202ENST00000585428 BTF3P20290 206 aaKnown RBP10.03□□□□□ -0.8
SDF2-202ENST00000585428 SELENOTP62341 195 aa10.03□□□□□ -0.8
SDF2-202ENST00000585428 C4orf46Q504U0 113 aa10.03□□□□□ -0.8
SDF2-202ENST00000585428 RXFP4Q8TDU9 374 aa10.03□□□□□ -0.8
SDF2-202ENST00000585428 TMEM263Q8WUH6 116 aaKnown RBP10.03□□□□□ -0.8
SDF2-202ENST00000585428 BCL7BQ9BQE9 202 aa10.03□□□□□ -0.8
SDF2-202ENST00000585428 Q9H3A6 140 aa10.03□□□□□ -0.8
SDF2-202ENST00000585428 SCRT2Q9NQ03 307 aa10.03□□□□□ -0.8
SDF2-202ENST00000585428 PPP1R14DQ9NXH3 145 aa10.03□□□□□ -0.8
SDF2-202ENST00000585428 H7BYZ3 331 aa10.02□□□□□ -0.81
SDF2-202ENST00000585428 OR5G3P0C626 314 aa10.02□□□□□ -0.81
SDF2-202ENST00000585428 LINC00869P0C866 280 aa10.02□□□□□ -0.81
SDF2-202ENST00000585428 PRB4P10163 310 aaPredicted RBP10.02□□□□□ -0.81
SDF2-202ENST00000585428 AP3S2P59780 193 aa10.02□□□□□ -0.81
SDF2-202ENST00000585428 KRTAP10-2P60368 255 aa10.02□□□□□ -0.81
SDF2-202ENST00000585428 POLR2GP62487 172 aaKnown RBP eCLIP10.02□□□□□ -0.81
SDF2-202ENST00000585428 OR5I1Q13606 314 aa10.02□□□□□ -0.81
SDF2-202ENST00000585428 KIR3DS1Q14943 382 aa10.02□□□□□ -0.81
SDF2-202ENST00000585428 ESRGQ1W209 222 aa10.02□□□□□ -0.81
SDF2-202ENST00000585428 TOMM5Q8N4H5 51 aa10.02□□□□□ -0.81
SDF2-202ENST00000585428 OR10J6PQ8NGY7 276 aa10.02□□□□□ -0.81
SDF2-202ENST00000585428 RPUSD4Q96CM3 377 aaKnown RBP10.02□□□□□ -0.81
SDF2-202ENST00000585428 GNPNAT1Q96EK6 184 aaPredicted RBP10.02□□□□□ -0.81
SDF2-202ENST00000585428 C20orf144Q9BQM9 153 aa10.02□□□□□ -0.81
SDF2-202ENST00000585428 UPK3BQ9BT76 320 aa10.02□□□□□ -0.81
SDF2-202ENST00000585428 NPVFQ9HCQ7 196 aa10.02□□□□□ -0.81
SDF2-202ENST00000585428 TRAV26-1A0A087WT03 109 aa10.01□□□□□ -0.81
SDF2-202ENST00000585428 H3BNG1 76 aa10.01□□□□□ -0.81
SDF2-202ENST00000585428 K7EPK0 472 aa10.01□□□□□ -0.81
SDF2-202ENST00000585428 ZNF701M0R085 212 aaPredicted RBP10.01□□□□□ -0.81
SDF2-202ENST00000585428 M6PRP20645 277 aa10.01□□□□□ -0.81
SDF2-202ENST00000585428 HOXA5P20719 270 aa10.01□□□□□ -0.81
SDF2-202ENST00000585428 LRRC20Q8TCA0 184 aa10.01□□□□□ -0.81
SDF2-202ENST00000585428 DEDD2Q8WXF8 326 aa10.01□□□□□ -0.81
SDF2-202ENST00000585428 SMIM8Q96KF7 97 aa10.01□□□□□ -0.81
SDF2-202ENST00000585428 ZNF331Q9NQX6 463 aaPredicted RBP10.01□□□□□ -0.81
SDF2-202ENST00000585428 PSENENQ9NZ42 101 aa10.01□□□□□ -0.81
SDF2-202ENST00000585428 A0A1W2PPQ1 181 aa10□□□□□ -0.81
SDF2-202ENST00000585428 SMCO3A2RU48 225 aa10□□□□□ -0.81
SDF2-202ENST00000585428 FNDC10F2Z333 226 aa10□□□□□ -0.81
SDF2-202ENST00000585428 ADAP1O75689 374 aa10□□□□□ -0.81
SDF2-202ENST00000585428 CXCL2P19875 107 aa10□□□□□ -0.81
SDF2-202ENST00000585428 ANXA7P20073 488 aaKnown RBP10□□□□□ -0.81
SDF2-202ENST00000585428 S100A7AQ86SG5 101 aa10□□□□□ -0.81
SDF2-202ENST00000585428 ZBTB8BQ8NAP8 495 aaPredicted RBP10□□□□□ -0.81
SDF2-202ENST00000585428 ARL6Q9H0F7 186 aa10□□□□□ -0.81
SDF2-202ENST00000585428 CCNKO75909 580 aa9.99□□□□□ -0.81
SDF2-202ENST00000585428 DLK1P80370 383 aa9.99□□□□□ -0.81
SDF2-202ENST00000585428 PYDC2Q56P42 97 aa9.99□□□□□ -0.81
SDF2-202ENST00000585428 TTC32Q5I0X7 151 aa9.99□□□□□ -0.81
SDF2-202ENST00000585428 TMEM14EPQ6UXP3 125 aa9.99□□□□□ -0.81
SDF2-202ENST00000585428 MCFD2Q8NI22 146 aa9.99□□□□□ -0.81
SDF2-202ENST00000585428 ARV1Q9H2C2 271 aa9.99□□□□□ -0.81
SDF2-202ENST00000585428 RNF24Q9Y225 148 aa9.99□□□□□ -0.81
SDF2-202ENST00000585428 V9GYH0 126 aa9.99□□□□□ -0.81
SDF2-202ENST00000585428 DNAH5Q8TE73 4624 aa9.98□□□□□ -0.81
SDF2-202ENST00000585428 A0A0J9YY99 117 aa9.98□□□□□ -0.81
SDF2-202ENST00000585428 C9orf170A2RU37 121 aa9.98□□□□□ -0.81
SDF2-202ENST00000585428 PRAC2D3DTV9 90 aa9.98□□□□□ -0.81
SDF2-202ENST00000585428 H3BMQ9 156 aa9.98□□□□□ -0.81
SDF2-202ENST00000585428 UBE2MP61081 183 aaKnown RBP9.98□□□□□ -0.81
SDF2-202ENST00000585428 PXDC1Q5TGL8 231 aa9.98□□□□□ -0.81
SDF2-202ENST00000585428 TEPPQ6URK8 271 aa9.98□□□□□ -0.81
SDF2-202ENST00000585428 CCDC28AQ8IWP9 274 aa9.98□□□□□ -0.81
SDF2-202ENST00000585428 MRPS16Q9Y3D3 137 aaKnown RBP9.98□□□□□ -0.81
SDF2-202ENST00000585428 APOBP04114 4563 aaKnown RBP9.98□□□□□ -0.81
SDF2-202ENST00000585428 GAGE12BA1L429 117 aa9.97□□□□□ -0.81
SDF2-202ENST00000585428 GAGE7O76087 117 aa9.97□□□□□ -0.81
SDF2-202ENST00000585428 SNRPCP09234 159 aaKnown RBP9.97□□□□□ -0.81
SDF2-202ENST00000585428 GAGE12FP0CL80 117 aa9.97□□□□□ -0.81
SDF2-202ENST00000585428 GAGE12GP0CL81 117 aa9.97□□□□□ -0.81
SDF2-202ENST00000585428 GAGE12IP0CL82 117 aa9.97□□□□□ -0.81
SDF2-202ENST00000585428 RRAS2P62070 204 aaPredicted RBP9.97□□□□□ -0.81
SDF2-202ENST00000585428 DAZ2Q13117 558 aaKnown RBP9.97□□□□□ -0.81
SDF2-202ENST00000585428 GFI1BQ5VTD9 330 aa9.97□□□□□ -0.81
SDF2-202ENST00000585428 LCN15Q6UWW0 184 aa9.97□□□□□ -0.81
SDF2-202ENST00000585428 LINC00305Q7Z4B0 112 aa9.97□□□□□ -0.81
SDF2-202ENST00000585428 OR10P1Q8NGE3 313 aa9.97□□□□□ -0.81
SDF2-202ENST00000585428 TMEM37Q8WXS4 190 aa9.97□□□□□ -0.81
SDF2-202ENST00000585428 SAT2Q96F10 170 aaPredicted RBP9.97□□□□□ -0.81
SDF2-202ENST00000585428 SLC50A1Q9BRV3 221 aa9.97□□□□□ -0.81
SDF2-202ENST00000585428 PARD6GQ9BYG4 376 aaPredicted RBP9.97□□□□□ -0.81
SDF2-202ENST00000585428 SSSCA1O60232 199 aa9.96□□□□□ -0.82
SDF2-202ENST00000585428 RLN2P04090 185 aa9.96□□□□□ -0.82
SDF2-202ENST00000585428 METTL15P1P0C7V9 234 aa9.96□□□□□ -0.82
SDF2-202ENST00000585428 CT45A10P0DMU9 189 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms