RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 IGHV3OR16-13A0A075B7E8 117 aa9.78□□□□□ -0.84
TRIM47-202ENST00000585333 IGHV3-74A0A0B4J1X5 117 aa9.78□□□□□ -0.84
TRIM47-202ENST00000585333 IGHV3-66A0A0C4DH42 116 aa9.78□□□□□ -0.84
TRIM47-202ENST00000585333 A0A1W2PRE2 83 aa9.78□□□□□ -0.84
TRIM47-202ENST00000585333 WIPF1O43516 503 aa9.78□□□□□ -0.84
TRIM47-202ENST00000585333 FHITP49789 147 aa9.78□□□□□ -0.84
TRIM47-202ENST00000585333 ZNF726P1Q15940 193 aa9.78□□□□□ -0.84
TRIM47-202ENST00000585333 FAM90A2PQ658T7 463 aa9.78□□□□□ -0.84
TRIM47-202ENST00000585333 LYPD6BQ8NI32 183 aa9.78□□□□□ -0.84
TRIM47-202ENST00000585333 TRAV5A0A0B4J249 113 aa9.77□□□□□ -0.85
TRIM47-202ENST00000585333 MRPS12O15235 138 aaKnown RBP9.77□□□□□ -0.85
TRIM47-202ENST00000585333 HMGB3O15347 200 aaKnown RBP9.77□□□□□ -0.85
TRIM47-202ENST00000585333 OR10J4P0C629 311 aa9.77□□□□□ -0.85
TRIM47-202ENST00000585333 CSN1S1P47710 185 aa9.77□□□□□ -0.85
TRIM47-202ENST00000585333 CD300EQ496F6 205 aaPredicted RBP9.77□□□□□ -0.85
TRIM47-202ENST00000585333 MORN5Q5VZ52 161 aa9.77□□□□□ -0.85
TRIM47-202ENST00000585333 RXFP4Q8TDU9 374 aa9.77□□□□□ -0.85
TRIM47-202ENST00000585333 FXYD5Q96DB9 178 aa9.77□□□□□ -0.85
TRIM47-202ENST00000585333 MRPL53Q96EL3 112 aaKnown RBP9.77□□□□□ -0.85
TRIM47-202ENST00000585333 C16orf92Q96LL3 132 aa9.77□□□□□ -0.85
TRIM47-202ENST00000585333 FAM110AQ9BQ89 295 aa9.77□□□□□ -0.85
TRIM47-202ENST00000585333 SERTM2A0A1B0GWG4 89 aa9.76□□□□□ -0.85
TRIM47-202ENST00000585333 F6UZH7 168 aa9.76□□□□□ -0.85
TRIM47-202ENST00000585333 NDUFS6O75380 124 aaKnown RBP9.76□□□□□ -0.85
TRIM47-202ENST00000585333 NMBP08949 121 aa9.76□□□□□ -0.85
TRIM47-202ENST00000585333 PYYP10082 97 aa9.76□□□□□ -0.85
TRIM47-202ENST00000585333 FGF8P55075 233 aaPredicted RBP9.76□□□□□ -0.85
TRIM47-202ENST00000585333 IFITM2Q01629 132 aa9.76□□□□□ -0.85
TRIM47-202ENST00000585333 TMEM61Q8N0U2 210 aa9.76□□□□□ -0.85
TRIM47-202ENST00000585333 CMTM2Q8TAZ6 248 aa9.76□□□□□ -0.85
TRIM47-202ENST00000585333 MS4A6AQ9H2W1 248 aa9.76□□□□□ -0.85
TRIM47-202ENST00000585333 SMDT1Q9H4I9 107 aa9.76□□□□□ -0.85
TRIM47-202ENST00000585333 OTORQ9NRC9 128 aa9.76□□□□□ -0.85
TRIM47-202ENST00000585333 PLA2G2EQ9NZK7 142 aa9.76□□□□□ -0.85
TRIM47-202ENST00000585333 FBLL1A6NHQ2 334 aaKnown RBP9.75□□□□□ -0.85
TRIM47-202ENST00000585333 K7EQM0 130 aa9.75□□□□□ -0.85
TRIM47-202ENST00000585333 GUCA2BQ16661 112 aa9.75□□□□□ -0.85
TRIM47-202ENST00000585333 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.75□□□□□ -0.85
TRIM47-202ENST00000585333 ADAMTSL5Q6ZMM2 481 aa9.75□□□□□ -0.85
TRIM47-202ENST00000585333 GTSCR1Q86UQ5 136 aa9.75□□□□□ -0.85
TRIM47-202ENST00000585333 BLNKQ8WV28 456 aa9.75□□□□□ -0.85
TRIM47-202ENST00000585333 ZNF331Q9NQX6 463 aaPredicted RBP9.75□□□□□ -0.85
TRIM47-202ENST00000585333 ZNF586Q9NXT0 402 aa9.75□□□□□ -0.85
TRIM47-202ENST00000585333 GNG13Q9P2W3 67 aa9.75□□□□□ -0.85
TRIM47-202ENST00000585333 K7EQG2 157 aa9.74□□□□□ -0.85
TRIM47-202ENST00000585333 PDE6DO43924 150 aa9.74□□□□□ -0.85
TRIM47-202ENST00000585333 SSX7Q7RTT5 188 aa9.74□□□□□ -0.85
TRIM47-202ENST00000585333 C5orf17Q8NAS9 161 aa9.74□□□□□ -0.85
TRIM47-202ENST00000585333 RPUSD4Q96CM3 377 aaKnown RBP9.74□□□□□ -0.85
TRIM47-202ENST00000585333 ZNF503Q96F45 646 aa9.74□□□□□ -0.85
TRIM47-202ENST00000585333 VAX2Q9UIW0 290 aa9.74□□□□□ -0.85
TRIM47-202ENST00000585333 WNK1Q9H4A3 2382 aa9.74□□□□□ -0.85
TRIM47-202ENST00000585333 TENM1Q9UKZ4 2725 aa9.74□□□□□ -0.85
TRIM47-202ENST00000585333 H3BQ15 152 aa9.73□□□□□ -0.85
TRIM47-202ENST00000585333 BCL2P10415 239 aa9.73□□□□□ -0.85
TRIM47-202ENST00000585333 RANP62826 216 aaKnown RBP9.73□□□□□ -0.85
TRIM47-202ENST00000585333 CST9LP1Q5W188 147 aa9.73□□□□□ -0.85
TRIM47-202ENST00000585333 DCANP1Q8TF63 244 aa9.73□□□□□ -0.85
TRIM47-202ENST00000585333 HIST1H2BAQ96A08 127 aa9.73□□□□□ -0.85
TRIM47-202ENST00000585333 Q9H3A6 140 aa9.73□□□□□ -0.85
TRIM47-202ENST00000585333 MED9Q9NWA0 146 aa9.73□□□□□ -0.85
TRIM47-202ENST00000585333 SMAD5-AS1Q9Y6J3 95 aa9.73□□□□□ -0.85
TRIM47-202ENST00000585333 IGKV3-7A0A075B6H7 116 aa9.72□□□□□ -0.85
TRIM47-202ENST00000585333 A0A1B0GV50 99 aa9.72□□□□□ -0.85
TRIM47-202ENST00000585333 RAB19A4D1S5 217 aa9.72□□□□□ -0.85
TRIM47-202ENST00000585333 FAM74A7A6NL05 159 aa9.72□□□□□ -0.85
TRIM47-202ENST00000585333 IGLL1P15814 213 aa9.72□□□□□ -0.85
TRIM47-202ENST00000585333 MEF2BQ02080 365 aaPredicted RBP9.72□□□□□ -0.85
TRIM47-202ENST00000585333 PEA15Q15121 130 aa9.72□□□□□ -0.85
TRIM47-202ENST00000585333 PSG3Q16557 428 aa9.72□□□□□ -0.85
TRIM47-202ENST00000585333 GBGT1Q8N5D6 347 aa9.72□□□□□ -0.85
TRIM47-202ENST00000585333 FAM210AQ96ND0 272 aa9.72□□□□□ -0.85
TRIM47-202ENST00000585333 EIF5A2Q9GZV4 153 aaKnown RBP9.72□□□□□ -0.85
TRIM47-202ENST00000585333 NBEAL1Q6ZS30 2694 aa9.72□□□□□ -0.85
TRIM47-202ENST00000585333 PGPA6NDG6 321 aa9.71□□□□□ -0.86
TRIM47-202ENST00000585333 RBFOX3A6NFN3 312 aa9.71□□□□□ -0.86
TRIM47-202ENST00000585333 OR11H12B2RN74 326 aa9.71□□□□□ -0.86
TRIM47-202ENST00000585333 C11orf94C9JXX5 98 aa9.71□□□□□ -0.86
TRIM47-202ENST00000585333 SOCS3O14543 225 aa9.71□□□□□ -0.86
TRIM47-202ENST00000585333 PAGE4O60829 102 aa9.71□□□□□ -0.86
TRIM47-202ENST00000585333 SLC25A5P05141 298 aaKnown RBP9.71□□□□□ -0.86
TRIM47-202ENST00000585333 S100A9P06702 114 aaKnown RBP9.71□□□□□ -0.86
TRIM47-202ENST00000585333 EDN2P20800 178 aa9.71□□□□□ -0.86
TRIM47-202ENST00000585333 TFPI2P48307 235 aa9.71□□□□□ -0.86
TRIM47-202ENST00000585333 ICAM4Q14773 271 aa9.71□□□□□ -0.86
TRIM47-202ENST00000585333 NDUFA5Q16718 116 aa9.71□□□□□ -0.86
TRIM47-202ENST00000585333 EBLN2Q6P2I7 272 aa9.71□□□□□ -0.86
TRIM47-202ENST00000585333 WFDC3Q8IUB2 231 aa9.71□□□□□ -0.86
TRIM47-202ENST00000585333 ZNF738Q8NE65 137 aa9.71□□□□□ -0.86
TRIM47-202ENST00000585333 TMPRSS5Q9H3S3 457 aa9.71□□□□□ -0.86
TRIM47-202ENST00000585333 ZNF256Q9Y2P7 627 aaPredicted RBP9.71□□□□□ -0.86
TRIM47-202ENST00000585333 RBAKDNA6NC62 111 aa9.7□□□□□ -0.86
TRIM47-202ENST00000585333 TMEM250H0YL14 139 aa9.7□□□□□ -0.86
TRIM47-202ENST00000585333 DUSP14O95147 198 aaKnown RBP9.7□□□□□ -0.86
TRIM47-202ENST00000585333 NDUFB4O95168 129 aa9.7□□□□□ -0.86
TRIM47-202ENST00000585333 UBE2G2P60604 165 aa9.7□□□□□ -0.86
TRIM47-202ENST00000585333 SUMO1P63165 101 aaKnown RBP9.7□□□□□ -0.86
TRIM47-202ENST00000585333 BEAN1Q3B7T3 259 aa9.7□□□□□ -0.86
TRIM47-202ENST00000585333 ZNF506Q5JVG8 444 aa9.7□□□□□ -0.86
TRIM47-202ENST00000585333 UQCC3Q6UW78 93 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms