RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 PSMF1Q92530 271 aa0.91□□□□□ -2.26
SMARCE1-219ENST00000583294 WFDC10AQ9H1F0 79 aa0.91□□□□□ -2.26
SMARCE1-219ENST00000583294 CACYBPQ9HB71 228 aaKnown RBP0.91□□□□□ -2.26
SMARCE1-219ENST00000583294 LYRM2Q9NU23 88 aaPredicted RBP0.91□□□□□ -2.26
SMARCE1-219ENST00000583294 N4BP2Q86UW6 1770 aaPredicted RBP0.91□□□□□ -2.26
SMARCE1-219ENST00000583294 ZNF462Q96JM2 2506 aa0.9□□□□□ -2.26
SMARCE1-219ENST00000583294 KLRD1Q13241 179 aa0.9□□□□□ -2.27
SMARCE1-219ENST00000583294 MSMO1Q15800 293 aa0.9□□□□□ -2.27
SMARCE1-219ENST00000583294 ARPINQ7Z6K5 226 aa0.9□□□□□ -2.27
SMARCE1-219ENST00000583294 OR13C6PQ8NH95 151 aa0.9□□□□□ -2.27
SMARCE1-219ENST00000583294 HYLS1Q96M11 299 aa0.9□□□□□ -2.27
SMARCE1-219ENST00000583294 LYSMD1Q96S90 227 aa0.9□□□□□ -2.27
SMARCE1-219ENST00000583294 GPX7Q96SL4 187 aaPredicted RBP0.9□□□□□ -2.27
SMARCE1-219ENST00000583294 CCDC94Q9BW85 323 aaPredicted RBP0.9□□□□□ -2.27
SMARCE1-219ENST00000583294 UHRF1BP1Q6BDS2 1440 aa0.89□□□□□ -2.27
SMARCE1-219ENST00000583294 RER1O15258 196 aa0.89□□□□□ -2.27
SMARCE1-219ENST00000583294 PPYP01298 95 aa0.89□□□□□ -2.27
SMARCE1-219ENST00000583294 IFNA14P01570 189 aa0.89□□□□□ -2.27
SMARCE1-219ENST00000583294 IGLV3-1P01715 115 aa0.89□□□□□ -2.27
SMARCE1-219ENST00000583294 APOA2P02652 100 aa0.89□□□□□ -2.27
SMARCE1-219ENST00000583294 OGNP20774 298 aaKnown RBP0.89□□□□□ -2.27
SMARCE1-219ENST00000583294 RPL19P84098 196 aaKnown RBP0.89□□□□□ -2.27
SMARCE1-219ENST00000583294 EIF3IQ13347 325 aaKnown RBP0.89□□□□□ -2.27
SMARCE1-219ENST00000583294 GINS3Q9BRX5 216 aa0.89□□□□□ -2.27
SMARCE1-219ENST00000583294 SH3BGRL3Q9H299 93 aa0.89□□□□□ -2.27
SMARCE1-219ENST00000583294 FANCMQ8IYD8 2048 aa0.89□□□□□ -2.27
SMARCE1-219ENST00000583294 TRAV27A0A087WT01 109 aa0.88□□□□□ -2.27
SMARCE1-219ENST00000583294 IFNA1P01562 189 aa0.88□□□□□ -2.27
SMARCE1-219ENST00000583294 PPP1R2P41236 205 aa0.88□□□□□ -2.27
SMARCE1-219ENST00000583294 LRRC18Q8N456 261 aa0.88□□□□□ -2.27
SMARCE1-219ENST00000583294 MAP1LC3BQ9GZQ8 125 aa0.88□□□□□ -2.27
SMARCE1-219ENST00000583294 STOML2Q9UJZ1 356 aa0.88□□□□□ -2.27
SMARCE1-219ENST00000583294 ZGRF1Q86YA3 2104 aa0.88□□□□□ -2.27
SMARCE1-219ENST00000583294 MYH2Q9UKX2 1941 aa0.87□□□□□ -2.27
SMARCE1-219ENST00000583294 RFX7Q2KHR2 1363 aa0.87□□□□□ -2.27
SMARCE1-219ENST00000583294 TRAV23DV6A0A075B6W5 121 aa0.87□□□□□ -2.27
SMARCE1-219ENST00000583294 hDV103S1A0JD37 113 aa0.87□□□□□ -2.27
SMARCE1-219ENST00000583294 JMJD7-PLA2G4BH0Y9G9 81 aa0.87□□□□□ -2.27
SMARCE1-219ENST00000583294 IFNA4P05014 189 aa0.87□□□□□ -2.27
SMARCE1-219ENST00000583294 LINC00575Q6W349 94 aa0.87□□□□□ -2.27
SMARCE1-219ENST00000583294 ASB4Q9Y574 426 aa0.87□□□□□ -2.27
SMARCE1-219ENST00000583294 COL24A1Q17RW2 1714 aa0.86□□□□□ -2.27
SMARCE1-219ENST00000583294 C9orf170A2RU37 121 aa0.86□□□□□ -2.27
SMARCE1-219ENST00000583294 C5orf67F2Z3F1 127 aa0.86□□□□□ -2.27
SMARCE1-219ENST00000583294 OR10AG1Q8NH19 301 aa0.86□□□□□ -2.27
SMARCE1-219ENST00000583294 ZDBF2Q9HCK1 2354 aa0.85□□□□□ -2.27
SMARCE1-219ENST00000583294 MFSD11O43934 449 aa0.85□□□□□ -2.27
SMARCE1-219ENST00000583294 HIST1H2BKO60814 126 aa0.85□□□□□ -2.27
SMARCE1-219ENST00000583294 HIST1H2BJP06899 126 aa0.85□□□□□ -2.27
SMARCE1-219ENST00000583294 VBP1P61758 197 aa0.85□□□□□ -2.27
SMARCE1-219ENST00000583294 GNG3P63215 75 aa0.85□□□□□ -2.27
SMARCE1-219ENST00000583294 SMIM20Q8N5G0 67 aa0.85□□□□□ -2.27
SMARCE1-219ENST00000583294 AP3S1Q92572 193 aa0.85□□□□□ -2.27
SMARCE1-219ENST00000583294 MALSU1Q96EH3 234 aa0.85□□□□□ -2.27
SMARCE1-219ENST00000583294 SPATA45Q537H7 98 aa0.84□□□□□ -2.27
SMARCE1-219ENST00000583294 TMED4Q7Z7H5 227 aa0.84□□□□□ -2.27
SMARCE1-219ENST00000583294 CDC26Q8NHZ8 85 aa0.84□□□□□ -2.27
SMARCE1-219ENST00000583294 CD109Q6YHK3 1445 aa0.83□□□□□ -2.28
SMARCE1-219ENST00000583294 PIAS1O75925 651 aa0.83□□□□□ -2.28
SMARCE1-219ENST00000583294 CSN2P05814 226 aa0.83□□□□□ -2.28
SMARCE1-219ENST00000583294 TAS2R41P59536 307 aa0.83□□□□□ -2.28
SMARCE1-219ENST00000583294 C1orf140Q5VVS0 124 aa0.83□□□□□ -2.28
SMARCE1-219ENST00000583294 NCAPD3P42695 1498 aa0.83□□□□□ -2.28
SMARCE1-219ENST00000583294 TRAV5A0A0B4J249 113 aa0.82□□□□□ -2.28
SMARCE1-219ENST00000583294 IDO1P14902 403 aa0.82□□□□□ -2.28
SMARCE1-219ENST00000583294 CIRBPQ14011 172 aaKnown RBP0.82□□□□□ -2.28
SMARCE1-219ENST00000583294 SPATA8Q6RVD6 105 aa0.82□□□□□ -2.28
SMARCE1-219ENST00000583294 GLIPR1L1Q6UWM5 242 aa0.82□□□□□ -2.28
SMARCE1-219ENST00000583294 MYH3P11055 1940 aa0.81□□□□□ -2.28
SMARCE1-219ENST00000583294 CAMSAP2Q08AD1 1489 aa0.81□□□□□ -2.28
SMARCE1-219ENST00000583294 A0A096LPI6 279 aa0.81□□□□□ -2.28
SMARCE1-219ENST00000583294 LYRM1O43325 122 aa0.81□□□□□ -2.28
SMARCE1-219ENST00000583294 CD14P08571 375 aa0.81□□□□□ -2.28
SMARCE1-219ENST00000583294 SPTBP11277 2137 aa0.81□□□□□ -2.28
SMARCE1-219ENST00000583294 HBBP68871 147 aa0.81□□□□□ -2.28
SMARCE1-219ENST00000583294 POU6F1Q14863 301 aa0.81□□□□□ -2.28
SMARCE1-219ENST00000583294 FKBP1CQ5VVH2 108 aa0.81□□□□□ -2.28
SMARCE1-219ENST00000583294 TCEAL2Q9H3H9 227 aaPredicted RBP0.81□□□□□ -2.28
SMARCE1-219ENST00000583294 RNF11Q9Y3C5 154 aa0.81□□□□□ -2.28
SMARCE1-219ENST00000583294 MUC4Q99102 2169 aa0.81□□□□□ -2.28
SMARCE1-219ENST00000583294 TRPM1Q7Z4N2 1603 aa0.81□□□□□ -2.28
SMARCE1-219ENST00000583294 FRMPD1Q5SYB0 1578 aa0.8□□□□□ -2.28
SMARCE1-219ENST00000583294 GPR31O00270 319 aa0.8□□□□□ -2.28
SMARCE1-219ENST00000583294 LYG2Q86SG7 212 aa0.8□□□□□ -2.28
SMARCE1-219ENST00000583294 FAM216BQ8N7L0 139 aa0.8□□□□□ -2.28
SMARCE1-219ENST00000583294 OR10AC1Q8NH08 325 aa0.8□□□□□ -2.28
SMARCE1-219ENST00000583294 PRRT1Q99946 306 aa0.8□□□□□ -2.28
SMARCE1-219ENST00000583294 UFC1Q9Y3C8 167 aa0.8□□□□□ -2.28
SMARCE1-219ENST00000583294 EIF3AQ14152 1382 aaKnown RBP0.8□□□□□ -2.28
SMARCE1-219ENST00000583294 NUPR2A6NF83 97 aa0.79□□□□□ -2.28
SMARCE1-219ENST00000583294 GLRXP35754 106 aa0.79□□□□□ -2.28
SMARCE1-219ENST00000583294 LTC4SQ16873 150 aa0.79□□□□□ -2.28
SMARCE1-219ENST00000583294 CROCCP2Q86T23 111 aa0.79□□□□□ -2.28
SMARCE1-219ENST00000583294 NUP35Q8NFH5 326 aa0.79□□□□□ -2.28
SMARCE1-219ENST00000583294 HOPXQ9BPY8 73 aaPredicted RBP0.79□□□□□ -2.28
SMARCE1-219ENST00000583294 RTL8BQ17RB0 113 aa0.78□□□□□ -2.28
SMARCE1-219ENST00000583294 RTL8AQ9BWD3 113 aa0.78□□□□□ -2.28
SMARCE1-219ENST00000583294 OR2H1Q9GZK4 316 aa0.78□□□□□ -2.28
SMARCE1-219ENST00000583294 C10orf95Q9H7T3 257 aa0.78□□□□□ -2.28
SMARCE1-219ENST00000583294 GID8Q9NWU2 228 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms