RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 HINT1P49773 126 aaPredicted RBP4.64□□□□□ -1.67
RTTN-209ENST00000583043 DGAT2L7PQ6IED9 249 aa4.64□□□□□ -1.67
RTTN-209ENST00000583043 LINC01356Q8N9X3 169 aa4.64□□□□□ -1.67
RTTN-209ENST00000583043 CEP192Q8TEP8 1941 aa4.64□□□□□ -1.67
RTTN-209ENST00000583043 LINC00205P59089 165 aa4.64□□□□□ -1.67
RTTN-209ENST00000583043 MTURNQ8N3F0 131 aa4.64□□□□□ -1.67
RTTN-209ENST00000583043 TEX22C9J3V5 150 aa4.64□□□□□ -1.67
RTTN-209ENST00000583043 K7EIM0 57 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 TNFRSF13BO14836 293 aaPredicted RBP4.63□□□□□ -1.67
RTTN-209ENST00000583043 IGLC2P0DOY2 106 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 IGLC3P0DOY3 106 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 ZNF493Q6ZR52 646 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 SPATA12Q7Z6I5 190 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 SCGB3A1Q96QR1 104 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 TECTAO75443 2155 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 IGHV3-48P01763 117 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 IGKCP01834 107 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 ELANEP08246 267 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 COX6CP09669 75 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 SAA4P35542 130 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 CDKN1AP38936 164 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 SRSF9Q13242 221 aaKnown RBP eCLIP4.63□□□□□ -1.67
RTTN-209ENST00000583043 PATE2Q6UY27 113 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 DPH3Q96FX2 82 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 CYYR1Q96J86 154 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 EXPH5Q8NEV8 1989 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 FER1L5A0AVI2 2057 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 M0R381 172 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 DLEU1O43261 78 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 IGKV1-17P01599 117 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 NMUP48645 174 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 MSMPQ1L6U9 139 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 EXOC3-AS1Q8N2X6 119 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 ZNF502Q8TBZ5 544 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 TMEM141Q96I45 108 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 LOC389332A0A1B0GUA5 103 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 C19orf71A6NCJ1 209 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 H3BTX0 84 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 K7EMT4 169 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 MSMBP08118 114 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 MBD6Q96DN6 1003 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 SPOCK3Q9BQ16 436 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 SHANK1Q9Y566 2161 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 VCYO14598 125 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 DUX4L9Q6RFH8 374 aaPredicted RBP4.63□□□□□ -1.67
RTTN-209ENST00000583043 DMRTC2Q8IXT2 367 aaPredicted RBP4.63□□□□□ -1.67
RTTN-209ENST00000583043 FAM19A2Q8N3H0 131 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 RNF152Q8N8N0 203 aa4.63□□□□□ -1.67
RTTN-209ENST00000583043 MYCNOSP40205 109 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 Q6ZWC4 215 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 TMEM208Q9BTX3 173 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 BEX4Q9NWD9 120 aaPredicted RBP4.62□□□□□ -1.67
RTTN-209ENST00000583043 NCOA6Q14686 2063 aaPredicted RBP4.62□□□□□ -1.67
RTTN-209ENST00000583043 LYNX1G3V0Z9 82 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 LY6LH3BQJ8 138 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 WISP2O76076 250 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 BRI3O95415 125 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 LYNX1P0DP58 116 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 CIRBPQ14011 172 aaKnown RBP4.62□□□□□ -1.67
RTTN-209ENST00000583043 Q8NA96 180 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 SSBP4Q9BWG4 385 aaPredicted RBP4.62□□□□□ -1.67
RTTN-209ENST00000583043 CHTOPQ9Y3Y2 248 aaKnown RBP4.62□□□□□ -1.67
RTTN-209ENST00000583043 D6R8Y8 96 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 H3BRM9 83 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 RHODO00212 210 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 HOXB4P17483 251 aaPredicted RBP4.62□□□□□ -1.67
RTTN-209ENST00000583043 LGALS3P17931 250 aaKnown RBP4.62□□□□□ -1.67
RTTN-209ENST00000583043 MLANAQ16655 118 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 EP400Q96L91 3159 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 A0A1B0GXF2 115 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 FBLN7Q53RD9 439 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 LINC01545Q5VT33 79 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 IL17RELQ6ZVW7 336 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 MLST8Q9BVC4 326 aa4.62□□□□□ -1.67
RTTN-209ENST00000583043 CENPVL3A0A0U1RRI6 287 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 CTRLP40313 264 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 KLF17Q5JT82 389 aaPredicted RBP4.61□□□□□ -1.67
RTTN-209ENST00000583043 ZNF841Q6ZN19 808 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 DCAF16Q9NXF7 216 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 ZNF580Q9UK33 172 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 DNAJC13O75165 2243 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 IGKV1D-37A0A075B6S9 117 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 RPL13AP40429 203 aaKnown RBP4.61□□□□□ -1.67
RTTN-209ENST00000583043 OR2K2Q8NGT1 345 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 SIRPDQ9H106 197 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 ATP6V0E1O15342 81 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 CA1P00915 261 aaPredicted RBP4.61□□□□□ -1.67
RTTN-209ENST00000583043 PLEKHB2Q96CS7 222 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 DUX5Q96PT3 197 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 HIST1H4GQ99525 98 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 FOXC2Q99958 501 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 HLA-DRB4P13762 266 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 SLAQ13239 276 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 GATD1Q8NB37 220 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 HLA-DRB4X5D2U9 266 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 IGKV1OR2-108A0A075B7D4 117 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 COX8AP10176 69 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 BPESC1Q9GZL8 116 aa4.61□□□□□ -1.67
RTTN-209ENST00000583043 MED12Q93074 2177 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms