RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 TXNDC17Q9BRA2 123 aa9.07□□□□□ -0.96
CCDC57-216ENST00000582885 NKX6-2Q9C056 277 aaPredicted RBP9.07□□□□□ -0.96
CCDC57-216ENST00000582885 TRAV2A0A0B4J234 112 aa9.06□□□□□ -0.96
CCDC57-216ENST00000582885 RAB19A4D1S5 217 aa9.06□□□□□ -0.96
CCDC57-216ENST00000582885 NDUFS6O75380 124 aaKnown RBP9.06□□□□□ -0.96
CCDC57-216ENST00000582885 NDUFB4O95168 129 aa9.06□□□□□ -0.96
CCDC57-216ENST00000582885 INSL3P51460 131 aa9.06□□□□□ -0.96
CCDC57-216ENST00000582885 PSG9Q00887 426 aa9.06□□□□□ -0.96
CCDC57-216ENST00000582885 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.06□□□□□ -0.96
CCDC57-216ENST00000582885 OR2K2Q8NGT1 345 aa9.06□□□□□ -0.96
CCDC57-216ENST00000582885 DYNLRB2Q8TF09 96 aa9.06□□□□□ -0.96
CCDC57-216ENST00000582885 FAM210AQ96ND0 272 aa9.06□□□□□ -0.96
CCDC57-216ENST00000582885 SLC50A1Q9BRV3 221 aa9.06□□□□□ -0.96
CCDC57-216ENST00000582885 MCRIP2Q9BUT9 160 aaKnown RBP9.06□□□□□ -0.96
CCDC57-216ENST00000582885 SMDT1Q9H4I9 107 aa9.06□□□□□ -0.96
CCDC57-216ENST00000582885 NRN1Q9NPD7 142 aa9.06□□□□□ -0.96
CCDC57-216ENST00000582885 CLEC5AQ9NY25 188 aa9.06□□□□□ -0.96
CCDC57-216ENST00000582885 GNG13Q9P2W3 67 aa9.06□□□□□ -0.96
CCDC57-216ENST00000582885 SORL1Q92673 2214 aa9.06□□□□□ -0.96
CCDC57-216ENST00000582885 RBFOX3A6NFN3 312 aa9.05□□□□□ -0.96
CCDC57-216ENST00000582885 FAM74A7A6NL05 159 aa9.05□□□□□ -0.96
CCDC57-216ENST00000582885 TSPAN4O14817 238 aa9.05□□□□□ -0.96
CCDC57-216ENST00000582885 IGLV1-51P01701 117 aa9.05□□□□□ -0.96
CCDC57-216ENST00000582885 BCL2P10415 239 aa9.05□□□□□ -0.96
CCDC57-216ENST00000582885 ARL6IP6Q8N6S5 226 aa9.05□□□□□ -0.96
CCDC57-216ENST00000582885 BLNKQ8WV28 456 aa9.05□□□□□ -0.96
CCDC57-216ENST00000582885 VAX2Q9UIW0 290 aa9.05□□□□□ -0.96
CCDC57-216ENST00000582885 PKD1L1Q8TDX9 2849 aa9.04□□□□□ -0.96
CCDC57-216ENST00000582885 LOC102723971A0A1B0GUV8 181 aa9.04□□□□□ -0.96
CCDC57-216ENST00000582885 PAGE4O60829 102 aa9.04□□□□□ -0.96
CCDC57-216ENST00000582885 SAP30O75446 220 aa9.04□□□□□ -0.96
CCDC57-216ENST00000582885 CD33P20138 364 aa9.04□□□□□ -0.96
CCDC57-216ENST00000582885 RPL11P62913 178 aaKnown RBP9.04□□□□□ -0.96
CCDC57-216ENST00000582885 PAFAH1B2P68402 229 aa9.04□□□□□ -0.96
CCDC57-216ENST00000582885 NDUFA5Q16718 116 aa9.04□□□□□ -0.96
CCDC57-216ENST00000582885 ZNF506Q5JVG8 444 aa9.04□□□□□ -0.96
CCDC57-216ENST00000582885 C9orf66Q5T8R8 295 aa9.04□□□□□ -0.96
CCDC57-216ENST00000582885 RBPMS2Q6ZRY4 209 aaKnown RBP9.04□□□□□ -0.96
CCDC57-216ENST00000582885 EIF4E3Q8N5X7 224 aaKnown RBP9.04□□□□□ -0.96
CCDC57-216ENST00000582885 DCANP1Q8TF63 244 aa9.04□□□□□ -0.96
CCDC57-216ENST00000582885 TCEAL7Q9BRU2 100 aa9.04□□□□□ -0.96
CCDC57-216ENST00000582885 MS4A6AQ9H2W1 248 aa9.04□□□□□ -0.96
CCDC57-216ENST00000582885 ZNF331Q9NQX6 463 aaPredicted RBP9.04□□□□□ -0.96
CCDC57-216ENST00000582885 PRELID1Q9Y255 219 aa9.04□□□□□ -0.96
CCDC57-216ENST00000582885 YTHDF2Q9Y5A9 579 aaKnown RBP9.04□□□□□ -0.96
CCDC57-216ENST00000582885 K7EQG2 157 aa9.03□□□□□ -0.96
CCDC57-216ENST00000582885 SLC17A3O00476 420 aa9.03□□□□□ -0.96
CCDC57-216ENST00000582885 ISLRO14498 428 aa9.03□□□□□ -0.96
CCDC57-216ENST00000582885 SOCS3O14543 225 aa9.03□□□□□ -0.96
CCDC57-216ENST00000582885 WIPF1O43516 503 aa9.03□□□□□ -0.96
CCDC57-216ENST00000582885 UBE2G2P60604 165 aa9.03□□□□□ -0.96
CCDC57-216ENST00000582885 RANP62826 216 aaKnown RBP9.03□□□□□ -0.96
CCDC57-216ENST00000582885 MEF2BQ02080 365 aaPredicted RBP9.03□□□□□ -0.96
CCDC57-216ENST00000582885 HAGHQ16775 308 aa9.03□□□□□ -0.96
CCDC57-216ENST00000582885 CD300EQ496F6 205 aaPredicted RBP9.03□□□□□ -0.96
CCDC57-216ENST00000582885 CCDC28AQ8IWP9 274 aa9.03□□□□□ -0.96
CCDC57-216ENST00000582885 TMEM61Q8N0U2 210 aa9.03□□□□□ -0.96
CCDC57-216ENST00000582885 SPAG8Q99932 426 aaPredicted RBP9.03□□□□□ -0.96
CCDC57-216ENST00000582885 Q9H3A6 140 aa9.03□□□□□ -0.96
CCDC57-216ENST00000582885 AAMDCQ9H7C9 122 aa9.03□□□□□ -0.96
CCDC57-216ENST00000582885 OTORQ9NRC9 128 aa9.03□□□□□ -0.96
CCDC57-216ENST00000582885 NOTCH3Q9UM47 2321 aa9.03□□□□□ -0.96
CCDC57-216ENST00000582885 GGTLC3B5MD39 225 aa9.02□□□□□ -0.97
CCDC57-216ENST00000582885 C11orf94C9JXX5 98 aa9.02□□□□□ -0.97
CCDC57-216ENST00000582885 H3BTX0 84 aa9.02□□□□□ -0.97
CCDC57-216ENST00000582885 SNRPCP09234 159 aaKnown RBP9.02□□□□□ -0.97
CCDC57-216ENST00000582885 ICAM4Q14773 271 aa9.02□□□□□ -0.97
CCDC57-216ENST00000582885 PEA15Q15121 130 aa9.02□□□□□ -0.97
CCDC57-216ENST00000582885 TOR2AQ5JU69 321 aa9.02□□□□□ -0.97
CCDC57-216ENST00000582885 CST9LP1Q5W188 147 aa9.02□□□□□ -0.97
CCDC57-216ENST00000582885 LCN12Q6JVE5 192 aa9.02□□□□□ -0.97
CCDC57-216ENST00000582885 UQCC3Q6UW78 93 aa9.02□□□□□ -0.97
CCDC57-216ENST00000582885 MRPL53Q96EL3 112 aaKnown RBP9.02□□□□□ -0.97
CCDC57-216ENST00000582885 RARRES2Q99969 163 aa9.02□□□□□ -0.97
CCDC57-216ENST00000582885 GPR61Q9BZJ8 451 aa9.02□□□□□ -0.97
CCDC57-216ENST00000582885 EIF5A2Q9GZV4 153 aaKnown RBP9.02□□□□□ -0.97
CCDC57-216ENST00000582885 TRAV8-2A0A0B4J237 113 aa9.01□□□□□ -0.97
CCDC57-216ENST00000582885 PGPA6NDG6 321 aa9.01□□□□□ -0.97
CCDC57-216ENST00000582885 DNASE2O00115 360 aaPredicted RBP9.01□□□□□ -0.97
CCDC57-216ENST00000582885 PDE6DO43924 150 aa9.01□□□□□ -0.97
CCDC57-216ENST00000582885 ID1P41134 155 aa9.01□□□□□ -0.97
CCDC57-216ENST00000582885 CD81P60033 236 aa9.01□□□□□ -0.97
CCDC57-216ENST00000582885 SUMO1P63165 101 aaKnown RBP9.01□□□□□ -0.97
CCDC57-216ENST00000582885 COMMD7Q86VX2 200 aa9.01□□□□□ -0.97
CCDC57-216ENST00000582885 C5orf17Q8NAS9 161 aa9.01□□□□□ -0.97
CCDC57-216ENST00000582885 RXFP4Q8TDU9 374 aa9.01□□□□□ -0.97
CCDC57-216ENST00000582885 C16orf92Q96LL3 132 aa9.01□□□□□ -0.97
CCDC57-216ENST00000582885 OR4C46A6NHA9 309 aa9□□□□□ -0.97
CCDC57-216ENST00000582885 F6UZH7 168 aa9□□□□□ -0.97
CCDC57-216ENST00000582885 TMEM250H0YL14 139 aa9□□□□□ -0.97
CCDC57-216ENST00000582885 ATP5G3P48201 142 aa9□□□□□ -0.97
CCDC57-216ENST00000582885 CMC4P56277 68 aaPredicted RBP9□□□□□ -0.97
CCDC57-216ENST00000582885 PSG3Q16557 428 aa9□□□□□ -0.97
CCDC57-216ENST00000582885 PRR31Q5SQ13 230 aa9□□□□□ -0.97
CCDC57-216ENST00000582885 EXOC3-AS1Q8N2X6 119 aa9□□□□□ -0.97
CCDC57-216ENST00000582885 GBGT1Q8N5D6 347 aa9□□□□□ -0.97
CCDC57-216ENST00000582885 SPATA3Q8NHX4 192 aa9□□□□□ -0.97
CCDC57-216ENST00000582885 HIST1H2BAQ96A08 127 aa9□□□□□ -0.97
CCDC57-216ENST00000582885 ZNF256Q9Y2P7 627 aaPredicted RBP9□□□□□ -0.97
CCDC57-216ENST00000582885 ANK2Q01484 3957 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms