RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 MIR17HGQ75NE6 70 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 LINC00305Q7Z4B0 112 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 FAM223AQ8IWN6 122 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 Q8N2B8 174 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 OR51G1Q8NGK1 321 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 EEF1AKMT3Q96AZ1 226 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 NKX6-2Q9C056 277 aaPredicted RBP7.88□□□□□ -1.15
SS18-221ENST00000582448 MRPL36Q9P0J6 103 aaKnown RBP7.88□□□□□ -1.15
SS18-221ENST00000582448 HIGD1AQ9Y241 93 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 ARL2-SNX15V9GYD0 113 aa7.88□□□□□ -1.15
SS18-221ENST00000582448 TRBV7-1A0A0A6YYK4 115 aa7.87□□□□□ -1.15
SS18-221ENST00000582448 SH2D7A6NKC9 451 aaPredicted RBP7.87□□□□□ -1.15
SS18-221ENST00000582448 C9JQL5 133 aa7.87□□□□□ -1.15
SS18-221ENST00000582448 EIF3GO75821 320 aaKnown RBP eCLIP7.87□□□□□ -1.15
SS18-221ENST00000582448 NDUFB8O95169 186 aa7.87□□□□□ -1.15
SS18-221ENST00000582448 PSG1P11464 419 aa7.87□□□□□ -1.15
SS18-221ENST00000582448 FCGR2BP31994 310 aaPredicted RBP7.87□□□□□ -1.15
SS18-221ENST00000582448 UBE2L3P68036 154 aaKnown RBP7.87□□□□□ -1.15
SS18-221ENST00000582448 C15orf32Q32M92 178 aa7.87□□□□□ -1.15
SS18-221ENST00000582448 SPATA31B1PQ5VZV4 182 aa7.87□□□□□ -1.15
SS18-221ENST00000582448 CYB561D1Q8N8Q1 229 aa7.87□□□□□ -1.15
SS18-221ENST00000582448 WIPF2Q8TF74 440 aaPredicted RBP7.87□□□□□ -1.15
SS18-221ENST00000582448 DPF1Q92782 380 aa7.87□□□□□ -1.15
SS18-221ENST00000582448 ATP6V0BQ99437 205 aa7.87□□□□□ -1.15
SS18-221ENST00000582448 B9D2Q9BPU9 175 aa7.87□□□□□ -1.15
SS18-221ENST00000582448 SCRT1Q9BWW7 348 aa7.87□□□□□ -1.15
SS18-221ENST00000582448 G3V318 75 aa7.86□□□□□ -1.15
SS18-221ENST00000582448 ADCYAP1P18509 176 aa7.86□□□□□ -1.15
SS18-221ENST00000582448 PLP1P60201 277 aa7.86□□□□□ -1.15
SS18-221ENST00000582448 UBE2G2P60604 165 aa7.86□□□□□ -1.15
SS18-221ENST00000582448 GUCA2BQ16661 112 aa7.86□□□□□ -1.15
SS18-221ENST00000582448 KLK9Q2XQG4 91 aa7.86□□□□□ -1.15
SS18-221ENST00000582448 TMEM37Q8WXS4 190 aa7.86□□□□□ -1.15
SS18-221ENST00000582448 TVP23CQ96ET8 276 aa7.86□□□□□ -1.15
SS18-221ENST00000582448 USMG5Q96IX5 58 aa7.86□□□□□ -1.15
SS18-221ENST00000582448 MS4A10Q96PG2 267 aa7.86□□□□□ -1.15
SS18-221ENST00000582448 PAXXQ9BUH6 204 aa7.86□□□□□ -1.15
SS18-221ENST00000582448 OR51M1Q9H341 326 aa7.86□□□□□ -1.15
SS18-221ENST00000582448 ZNF580Q9UK33 172 aa7.86□□□□□ -1.15
SS18-221ENST00000582448 KLK9Q9UKQ9 250 aa7.86□□□□□ -1.15
SS18-221ENST00000582448 TSSC4Q9Y5U2 329 aaPredicted RBP7.86□□□□□ -1.15
SS18-221ENST00000582448 PUS1Q9Y606 427 aaKnown RBP eCLIP7.86□□□□□ -1.15
SS18-221ENST00000582448 TRBV9A0A0B4J1U6 114 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 A0A0G2JLM5 398 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 ZNF727A8MUV8 499 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 BRI3O95415 125 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 IGKV1-17P01599 117 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 TRGV3P03979 118 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 IL4P05112 153 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 TPPP2P59282 170 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 SLC35B1P78383 322 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 RELQ04864 619 aaPredicted RBP7.85□□□□□ -1.15
SS18-221ENST00000582448 PNRC1Q12796 327 aaPredicted RBP7.85□□□□□ -1.15
SS18-221ENST00000582448 ODF1Q14990 250 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 RHEBQ15382 184 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 ZNF674Q2M3X9 581 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 TCTEX1D4Q5JR98 221 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 TMEM190Q8WZ59 177 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 RNF125Q96EQ8 232 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 SMIM7Q9BQ49 75 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 GNB4Q9HAV0 340 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 PRELID1Q9Y255 219 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 S4R3C0 116 aa7.85□□□□□ -1.15
SS18-221ENST00000582448 PSMB11A5LHX3 300 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 OR2T8A6NH00 312 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 LINC01548A6NM66 108 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 B4DEV8 164 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 H3BQ15 152 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 BMPR1BO00238 502 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 OR10J4P0C629 311 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 GPR183P32249 361 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 CD81P60033 236 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 FAM209BQ5JX69 171 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 C10orf99Q6UWK7 81 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 PATE2Q6UY27 113 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 ZNF600Q6ZNG1 722 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 OR4X2Q8NGF9 303 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 ZNF502Q8TBZ5 544 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 RPUSD4Q96CM3 377 aaKnown RBP7.84□□□□□ -1.15
SS18-221ENST00000582448 ASCL2Q99929 193 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 SLC25A2Q9BXI2 301 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 RPS10P5Q9NQ39 176 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 NAT8Q9UHE5 227 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 U3KQK5 164 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 TNCP24821 2201 aa7.84□□□□□ -1.15
SS18-221ENST00000582448 TRAV5A0A0B4J249 113 aa7.83□□□□□ -1.16
SS18-221ENST00000582448 A0A1W2PRE2 83 aa7.83□□□□□ -1.16
SS18-221ENST00000582448 FAM74A7A6NL05 159 aa7.83□□□□□ -1.16
SS18-221ENST00000582448 SCO1O75880 301 aa7.83□□□□□ -1.16
SS18-221ENST00000582448 OR2C1O95371 312 aa7.83□□□□□ -1.16
SS18-221ENST00000582448 IGHV3-23P01764 117 aa7.83□□□□□ -1.16
SS18-221ENST00000582448 CLEC3BP05452 202 aa7.83□□□□□ -1.16
SS18-221ENST00000582448 RAB9AP51151 201 aa7.83□□□□□ -1.16
SS18-221ENST00000582448 BTN1A1Q13410 526 aa7.83□□□□□ -1.16
SS18-221ENST00000582448 TMEM241Q24JQ0 296 aa7.83□□□□□ -1.16
SS18-221ENST00000582448 CLEC19AQ6UXS0 136 aa7.83□□□□□ -1.16
SS18-221ENST00000582448 BPIFA4PQ86YQ2 179 aa7.83□□□□□ -1.16
SS18-221ENST00000582448 TCEAL7Q9BRU2 100 aa7.83□□□□□ -1.16
SS18-221ENST00000582448 SLC25A39Q9BZJ4 359 aaPredicted RBP7.83□□□□□ -1.16
SS18-221ENST00000582448 TMEM14CQ9P0S9 112 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms