RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 H3BRN7 92 aa6.59□□□□□ -1.35
PDLIM1P3-201ENST00000582370 NDUFS6O75380 124 aaKnown RBP6.59□□□□□ -1.35
PDLIM1P3-201ENST00000582370 IFNA1P01562 189 aa6.59□□□□□ -1.35
PDLIM1P3-201ENST00000582370 STAG3L2P0CL84 134 aa6.59□□□□□ -1.35
PDLIM1P3-201ENST00000582370 STAG3L3P0CL85 134 aa6.59□□□□□ -1.35
PDLIM1P3-201ENST00000582370 PSG9Q00887 426 aa6.59□□□□□ -1.35
PDLIM1P3-201ENST00000582370 DEFB136Q30KP8 78 aa6.59□□□□□ -1.35
PDLIM1P3-201ENST00000582370 FAM74A1Q5RGS3 127 aa6.59□□□□□ -1.35
PDLIM1P3-201ENST00000582370 RPP25LQ8N5L8 163 aaKnown RBP6.59□□□□□ -1.35
PDLIM1P3-201ENST00000582370 RAB24Q969Q5 203 aa6.59□□□□□ -1.35
PDLIM1P3-201ENST00000582370 SH3BGRL3Q9H299 93 aa6.59□□□□□ -1.35
PDLIM1P3-201ENST00000582370 HRH4Q9H3N8 390 aa6.59□□□□□ -1.35
PDLIM1P3-201ENST00000582370 SMDT1Q9H4I9 107 aa6.59□□□□□ -1.35
PDLIM1P3-201ENST00000582370 VPS13DQ5THJ4 4388 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 A0A087X0K7 114 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 TMEM213A2RRL7 107 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 CHEK1O14757 476 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 RGS13O14921 159 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 HIST1H1EP10412 219 aaKnown RBP6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 FOLR2P14207 255 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 GP9P14770 177 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 ATF4P18848 351 aaPredicted RBP6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 GATA2P23769 480 aaPredicted RBP6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 SLURP1P55000 103 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 LCN12Q6JVE5 192 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 C16orf54Q6UWD8 224 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 LCN15Q6UWW0 184 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 ALKAL2Q6UX46 152 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 UNQ9165/PRO28630Q6UXU0 137 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 SIGLEC15Q6ZMC9 328 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 RBPMS2Q6ZRY4 209 aaKnown RBP6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 FAM213BQ8TBF2 198 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 DYNLRB2Q8TF09 96 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 DLX4Q92988 240 aaPredicted RBP6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 SLC50A1Q9BRV3 221 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 RHPN1-AS1Q9BWJ2 59 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 OR51M1Q9H341 326 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 MANBALQ9NQG1 85 aa6.58□□□□□ -1.36
PDLIM1P3-201ENST00000582370 MUC4Q99102 2169 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 MAP1LC3B2A6NCE7 125 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 FBLL1A6NHQ2 334 aaKnown RBP6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 A8MZ25 164 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 OR7C2O60412 319 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 ID1P41134 155 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 FAM122CQ6P4D5 195 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 PATE2Q6UY27 113 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 IL34Q6ZMJ4 242 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 LYPD6BQ8NI32 183 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 SFT2D1Q8WV19 159 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 GLMPQ8WWB7 406 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 SPAG8Q99932 426 aaPredicted RBP6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 FAM110AQ9BQ89 295 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 PAXXQ9BUH6 204 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 MAP1LC3BQ9GZQ8 125 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 AAMDCQ9H7C9 122 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 DOK5Q9P104 306 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 MLXQ9UH92 298 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 PRELID1Q9Y255 219 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 BOLA1Q9Y3E2 137 aa6.57□□□□□ -1.36
PDLIM1P3-201ENST00000582370 IGHV3-35A0A0C4DH35 117 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 SERTM2A0A1B0GWG4 89 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 A0A1W2PRE2 83 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 OR4C46A6NHA9 309 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 ZNF785A8K8V0 405 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 ISLRO14498 428 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 TSPAN4O14817 238 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 LY6G6CO95867 125 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 CSN3P07498 182 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 IGHV4-30-4P0DP06 118 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 FHITP49789 147 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 SNRPD3P62318 126 aaKnown RBP6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 UBE2L3P68036 154 aaKnown RBP6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 TM4SF20Q53R12 229 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 CLLU1Q5K131 121 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 RXFP4Q8TDU9 374 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 MRPL53Q96EL3 112 aaKnown RBP6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 UHRF2Q96PU4 802 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 SLC25A22Q9H936 323 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 NRN1Q9NPD7 142 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 C19orf73Q9NVV2 129 aa6.56□□□□□ -1.36
PDLIM1P3-201ENST00000582370 PKHD1P08F94 4074 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 DYNC1H1Q14204 4646 aaKnown RBP6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 F6UZH7 168 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 K7EQM0 130 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 SAP30O75446 220 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 IGLV1-51P01701 117 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 NBEAP1P0C6P0 100 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 ARL14EPLP0DKL9 152 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 IGLC2P0DOY2 106 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 GCHFRP30047 84 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 RPL11P62913 178 aaKnown RBP6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 DEFB114Q30KQ6 69 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 SPATA31B1PQ5VZV4 182 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 FAM90A2PQ658T7 463 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 MIR17HGQ75NE6 70 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 TCF24Q7RTU0 167 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 RPUSD4Q96CM3 377 aaKnown RBP6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 SCRT1Q9BWW7 348 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 SLC25A2Q9BXI2 301 aa6.55□□□□□ -1.36
PDLIM1P3-201ENST00000582370 MED9Q9NWA0 146 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms